data_6FQX # _model_server_result.job_id z8q_ouCmvCHFuZfUIYh_NQ _model_server_result.datetime_utc '2024-10-14 08:22:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fqx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":505}' # _entry.id 6FQX # _exptl.entry_id 6FQX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FQX _cell.length_a 134.45 _cell.length_b 134.45 _cell.length_c 406.05 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FQX _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L,M,N,O,P,Q,R,S,IA,JA 1 1 C,D,T,U,V,W,KA,LA 2 1 E,F,X,Y,Z,AA,BA,CA,DA,EA,MA,NA 3 1 G,H,FA,GA,HA,OA,PA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 281 A CYS 281 1_555 B SG CYS 281 B CYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 C SG CYS 281 C CYS 281 1_555 D SG CYS 281 D CYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 E SG CYS 281 E CYS 281 1_555 F SG CYS 281 F CYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 G SG CYS 281 G CYS 281 1_555 H SG CYS 281 H CYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 288 n n C1 C2 PGE sing 289 n n C1 H1 PGE sing 290 n n C1 H12 PGE sing 291 n n O1 HO1 PGE sing 292 n n C2 O2 PGE sing 293 n n C2 H2 PGE sing 294 n n C2 H22 PGE sing 295 n n O2 C3 PGE sing 296 n n C3 C4 PGE sing 297 n n C3 H3 PGE sing 298 n n C3 H32 PGE sing 299 n n C4 O3 PGE sing 300 n n C4 H4 PGE sing 301 n n C4 H42 PGE sing 302 n n O4 C6 PGE sing 303 n n O4 HO4 PGE sing 304 n n C6 C5 PGE sing 305 n n C6 H6 PGE sing 306 n n C6 H62 PGE sing 307 n n C5 O3 PGE sing 308 n n C5 H5 PGE sing 309 n n C5 H52 PGE sing 310 n n # _atom_sites.entry_id 6FQX _atom_sites.fract_transf_matrix[1][1] 0.007438 _atom_sites.fract_transf_matrix[1][2] 0.004294 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008588 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002463 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 GOL A 1 501 6 GOL GOL . J 2 GOL A 1 502 15 GOL GOL . K 3 PEG A 1 503 2 PEG PEG . L 3 PEG A 1 504 4 PEG PEG . M 4 PGE A 1 505 1 PGE PGE . N 2 GOL B 1 501 3 GOL GOL . O 2 GOL B 1 502 5 GOL GOL . P 2 GOL B 1 503 9 GOL GOL . Q 2 GOL B 1 504 14 GOL GOL . R 3 PEG B 1 505 1 PEG PEG . S 4 PGE B 1 506 2 PGE PGE . T 2 GOL C 1 501 1 GOL GOL . U 3 PEG C 1 502 5 PEG PEG . V 2 GOL D 1 501 4 GOL GOL . W 5 AE3 D 1 502 1 AE3 PGE . X 2 GOL E 1 501 10 GOL GOL . Y 2 GOL E 1 502 11 GOL GOL . Z 3 PEG E 1 503 3 PEG PEG . AA 3 PEG E 1 504 5 PEG PEG . BA 2 GOL F 1 501 2 GOL GOL . CA 2 GOL F 1 502 8 GOL GOL . DA 2 GOL F 1 503 13 GOL GOL . EA 3 PEG F 1 504 6 PEG PEG . FA 2 GOL H 1 501 12 GOL GOL . GA 3 PEG H 1 502 6 PEG PEG . HA 3 PEG H 1 503 7 PEG PEG . IA 6 HOH A 1 601 70 HOH HOH . IA 6 HOH A 2 602 13 HOH HOH . IA 6 HOH A 3 603 51 HOH HOH . IA 6 HOH A 4 604 52 HOH HOH . IA 6 HOH A 5 605 94 HOH HOH . IA 6 HOH A 6 606 45 HOH HOH . IA 6 HOH A 7 607 16 HOH HOH . IA 6 HOH A 8 608 22 HOH HOH . IA 6 HOH A 9 609 8 HOH HOH . IA 6 HOH A 10 610 98 HOH HOH . IA 6 HOH A 11 611 47 HOH HOH . IA 6 HOH A 12 612 36 HOH HOH . JA 6 HOH B 1 601 82 HOH HOH . JA 6 HOH B 2 602 2 HOH HOH . JA 6 HOH B 3 603 29 HOH HOH . JA 6 HOH B 4 604 60 HOH HOH . JA 6 HOH B 5 605 19 HOH HOH . JA 6 HOH B 6 606 93 HOH HOH . JA 6 HOH B 7 607 62 HOH HOH . JA 6 HOH B 8 608 64 HOH HOH . JA 6 HOH B 9 609 66 HOH HOH . JA 6 HOH B 10 610 21 HOH HOH . JA 6 HOH B 11 611 48 HOH HOH . JA 6 HOH B 12 612 44 HOH HOH . JA 6 HOH B 13 613 30 HOH HOH . JA 6 HOH B 14 614 6 HOH HOH . JA 6 HOH B 15 615 78 HOH HOH . JA 6 HOH B 16 616 11 HOH HOH . JA 6 HOH B 17 617 41 HOH HOH . JA 6 HOH B 18 618 79 HOH HOH . JA 6 HOH B 19 619 23 HOH HOH . JA 6 HOH B 20 620 85 HOH HOH . JA 6 HOH B 21 621 59 HOH HOH . KA 6 HOH C 1 601 39 HOH HOH . KA 6 HOH C 2 602 35 HOH HOH . KA 6 HOH C 3 603 1 HOH HOH . KA 6 HOH C 4 604 5 HOH HOH . KA 6 HOH C 5 605 42 HOH HOH . KA 6 HOH C 6 606 49 HOH HOH . KA 6 HOH C 7 607 68 HOH HOH . KA 6 HOH C 8 608 20 HOH HOH . KA 6 HOH C 9 609 63 HOH HOH . KA 6 HOH C 10 610 18 HOH HOH . KA 6 HOH C 11 611 24 HOH HOH . LA 6 HOH D 1 601 80 HOH HOH . LA 6 HOH D 2 602 81 HOH HOH . LA 6 HOH D 3 603 7 HOH HOH . LA 6 HOH D 4 604 14 HOH HOH . LA 6 HOH D 5 605 32 HOH HOH . LA 6 HOH D 6 606 90 HOH HOH . LA 6 HOH D 7 607 25 HOH HOH . LA 6 HOH D 8 608 58 HOH HOH . LA 6 HOH D 9 609 99 HOH HOH . LA 6 HOH D 10 610 96 HOH HOH . MA 6 HOH E 1 601 67 HOH HOH . MA 6 HOH E 2 602 38 HOH HOH . MA 6 HOH E 3 603 40 HOH HOH . MA 6 HOH E 4 604 83 HOH HOH . MA 6 HOH E 5 605 61 HOH HOH . MA 6 HOH E 6 606 37 HOH HOH . MA 6 HOH E 7 607 95 HOH HOH . MA 6 HOH E 8 608 53 HOH HOH . MA 6 HOH E 9 609 26 HOH HOH . MA 6 HOH E 10 610 27 HOH HOH . MA 6 HOH E 11 611 69 HOH HOH . MA 6 HOH E 12 612 33 HOH HOH . MA 6 HOH E 13 613 65 HOH HOH . MA 6 HOH E 14 614 77 HOH HOH . NA 6 HOH F 1 601 46 HOH HOH . NA 6 HOH F 2 602 76 HOH HOH . NA 6 HOH F 3 603 84 HOH HOH . NA 6 HOH F 4 604 89 HOH HOH . NA 6 HOH F 5 605 50 HOH HOH . NA 6 HOH F 6 606 97 HOH HOH . NA 6 HOH F 7 607 92 HOH HOH . NA 6 HOH F 8 608 57 HOH HOH . NA 6 HOH F 9 609 87 HOH HOH . NA 6 HOH F 10 610 88 HOH HOH . NA 6 HOH F 11 611 72 HOH HOH . NA 6 HOH F 12 612 17 HOH HOH . NA 6 HOH F 13 613 55 HOH HOH . OA 6 HOH G 1 501 3 HOH HOH . OA 6 HOH G 2 502 86 HOH HOH . OA 6 HOH G 3 503 56 HOH HOH . OA 6 HOH G 4 504 91 HOH HOH . OA 6 HOH G 5 505 73 HOH HOH . OA 6 HOH G 6 506 54 HOH HOH . OA 6 HOH G 7 507 4 HOH HOH . OA 6 HOH G 8 508 15 HOH HOH . OA 6 HOH G 9 509 31 HOH HOH . OA 6 HOH G 10 510 43 HOH HOH . OA 6 HOH G 11 511 9 HOH HOH . OA 6 HOH G 12 512 34 HOH HOH . PA 6 HOH H 1 601 74 HOH HOH . PA 6 HOH H 2 602 10 HOH HOH . PA 6 HOH H 3 603 75 HOH HOH . PA 6 HOH H 4 604 28 HOH HOH . PA 6 HOH H 5 605 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . M 4 50.006 11.653 29.495 1 81.76 ? C1 PGE 505 A 1 HETATM 2 O O1 PGE . . . M 4 50.032 13.036 29.86 1 76.63 ? O1 PGE 505 A 1 HETATM 3 C C2 PGE . . . M 4 49.733 10.745 30.681 1 69.08 ? C2 PGE 505 A 1 HETATM 4 O O2 PGE . . . M 4 50.596 11.154 31.796 1 73.68 ? O2 PGE 505 A 1 HETATM 5 C C3 PGE . . . M 4 50.178 10.705 33.118 1 72.64 ? C3 PGE 505 A 1 HETATM 6 C C4 PGE . . . M 4 51.393 10.486 34.004 1 76.71 ? C4 PGE 505 A 1 HETATM 7 O O4 PGE . . . M 4 48.784 8.63 34.825 1 70.32 ? O4 PGE 505 A 1 HETATM 8 C C6 PGE . . . M 4 49.674 8.251 35.905 1 78.08 ? C6 PGE 505 A 1 HETATM 9 C C5 PGE . . . M 4 51.011 9.057 35.861 1 70.35 ? C5 PGE 505 A 1 HETATM 10 O O3 PGE . . . M 4 51.423 9.149 34.55 1 80.91 ? O3 PGE 505 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #