data_6FR2
#
_model_server_result.job_id            KOC3CpsJxfFOR5v6LtaYUw 
_model_server_result.datetime_utc      '2024-11-02 17:31:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fr2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    6FR2 
#
_exptl.entry_id    6FR2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              493.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-[(4~{S})-9-propan-2-ylsulfonyl-1-oxa-9-azaspiro[5.5]undecan-4-yl]-3-[[4-(trifluoromethyloxy)phenyl]methyl]urea 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6FR2 
_cell.length_a            80.091 
_cell.length_b            92.18 
_cell.length_c            106.998 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FR2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D 1 1 
A,B,C,D 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 291 A ASP 509 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc2 A OD2 ASP 291 A ASP 509 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc3 C MG MG . A MG 602 1_555 D O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? 
#
_chem_comp.formula           'C21 H30 F3 N3 O5 S' 
_chem_comp.formula_weight    493.54 
_chem_comp.id                E3N 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-[(4~{S})-9-propan-2-ylsulfonyl-1-oxa-9-azaspiro[5.5]undecan-4-yl]-3-[[4-(trifluoromethyloxy)phenyl]methyl]urea 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C33 C32 E3N doub 83 n y 
C33 C23 E3N sing 84 n y 
C32 C26 E3N sing 85 n y 
C22 C23 E3N sing 86 n n 
C22 N21 E3N sing 87 n n 
C23 C24 E3N doub 88 n y 
C26 O27 E3N sing 89 n n 
C26 C25 E3N doub 90 n y 
O01 C02 E3N doub 91 n n 
O27 C28 E3N sing 92 n n 
F29 C28 E3N sing 93 n n 
N21 C02 E3N sing 94 n n 
C24 C25 E3N sing 95 n y 
F30 C28 E3N sing 96 n n 
C02 N03 E3N sing 97 n n 
C28 F31 E3N sing 98 n n 
C14 C13 E3N sing 99 n n 
N03 C04 E3N sing 100 n n 
C19 C18 E3N sing 101 n n 
C19 C08 E3N sing 102 n n 
C04 C20 E3N sing 103 n n 
C04 C05 E3N sing 104 n n 
O16 S12 E3N doub 105 n n 
C18 N11 E3N sing 106 n n 
C20 C08 E3N sing 107 n n 
C13 S12 E3N sing 108 n n 
C13 C15 E3N sing 109 n n 
C08 C09 E3N sing 110 n n 
C08 O07 E3N sing 111 n n 
S12 N11 E3N sing 112 n n 
S12 O17 E3N doub 113 n n 
C05 C06 E3N sing 114 n n 
N11 C10 E3N sing 115 n n 
C06 O07 E3N sing 116 n n 
C09 C10 E3N sing 117 n n 
C10 H1 E3N sing 118 n n 
C10 H2 E3N sing 119 n n 
C13 H3 E3N sing 120 n n 
C15 H4 E3N sing 121 n n 
C15 H5 E3N sing 122 n n 
C15 H6 E3N sing 123 n n 
C20 H7 E3N sing 124 n n 
C20 H8 E3N sing 125 n n 
C22 H9 E3N sing 126 n n 
C22 H10 E3N sing 127 n n 
C24 H11 E3N sing 128 n n 
C04 H12 E3N sing 129 n n 
C05 H13 E3N sing 130 n n 
C05 H14 E3N sing 131 n n 
C06 H15 E3N sing 132 n n 
C06 H16 E3N sing 133 n n 
C09 H17 E3N sing 134 n n 
C09 H18 E3N sing 135 n n 
C14 H19 E3N sing 136 n n 
C14 H20 E3N sing 137 n n 
C14 H21 E3N sing 138 n n 
C18 H22 E3N sing 139 n n 
C18 H23 E3N sing 140 n n 
C19 H24 E3N sing 141 n n 
C19 H25 E3N sing 142 n n 
C25 H26 E3N sing 143 n n 
C32 H27 E3N sing 144 n n 
C33 H28 E3N sing 145 n n 
N03 H29 E3N sing 146 n n 
N21 H30 E3N sing 147 n n 
#
_atom_sites.entry_id                     6FR2 
_atom_sites.fract_transf_matrix[1][1]    0.012486 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010848 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009346 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 E3N A 1 601 1 E3N LIG . 
C 3 MG A 1 602 1 MG MG . 
D 4 HOH A 1 701 116 HOH HOH . 
D 4 HOH A 2 702 71 HOH HOH . 
D 4 HOH A 3 703 8 HOH HOH . 
D 4 HOH A 4 704 84 HOH HOH . 
D 4 HOH A 5 705 111 HOH HOH . 
D 4 HOH A 6 706 60 HOH HOH . 
D 4 HOH A 7 707 20 HOH HOH . 
D 4 HOH A 8 708 13 HOH HOH . 
D 4 HOH A 9 709 22 HOH HOH . 
D 4 HOH A 10 710 12 HOH HOH . 
D 4 HOH A 11 711 61 HOH HOH . 
D 4 HOH A 12 712 2 HOH HOH . 
D 4 HOH A 13 713 34 HOH HOH . 
D 4 HOH A 14 714 18 HOH HOH . 
D 4 HOH A 15 715 3 HOH HOH . 
D 4 HOH A 16 716 109 HOH HOH . 
D 4 HOH A 17 717 66 HOH HOH . 
D 4 HOH A 18 718 65 HOH HOH . 
D 4 HOH A 19 719 99 HOH HOH . 
D 4 HOH A 20 720 69 HOH HOH . 
D 4 HOH A 21 721 100 HOH HOH . 
D 4 HOH A 22 722 31 HOH HOH . 
D 4 HOH A 23 723 33 HOH HOH . 
D 4 HOH A 24 724 29 HOH HOH . 
D 4 HOH A 25 725 14 HOH HOH . 
D 4 HOH A 26 726 62 HOH HOH . 
D 4 HOH A 27 727 54 HOH HOH . 
D 4 HOH A 28 728 108 HOH HOH . 
D 4 HOH A 29 729 63 HOH HOH . 
D 4 HOH A 30 730 57 HOH HOH . 
D 4 HOH A 31 731 27 HOH HOH . 
D 4 HOH A 32 732 42 HOH HOH . 
D 4 HOH A 33 733 6 HOH HOH . 
D 4 HOH A 34 734 24 HOH HOH . 
D 4 HOH A 35 735 48 HOH HOH . 
D 4 HOH A 36 736 38 HOH HOH . 
D 4 HOH A 37 737 26 HOH HOH . 
D 4 HOH A 38 738 49 HOH HOH . 
D 4 HOH A 39 739 73 HOH HOH . 
D 4 HOH A 40 740 89 HOH HOH . 
D 4 HOH A 41 741 15 HOH HOH . 
D 4 HOH A 42 742 121 HOH HOH . 
D 4 HOH A 43 743 91 HOH HOH . 
D 4 HOH A 44 744 35 HOH HOH . 
D 4 HOH A 45 745 96 HOH HOH . 
D 4 HOH A 46 746 44 HOH HOH . 
D 4 HOH A 47 747 83 HOH HOH . 
D 4 HOH A 48 748 82 HOH HOH . 
D 4 HOH A 49 749 59 HOH HOH . 
D 4 HOH A 50 750 32 HOH HOH . 
D 4 HOH A 51 751 80 HOH HOH . 
D 4 HOH A 52 752 56 HOH HOH . 
D 4 HOH A 53 753 25 HOH HOH . 
D 4 HOH A 54 754 19 HOH HOH . 
D 4 HOH A 55 755 79 HOH HOH . 
D 4 HOH A 56 756 7 HOH HOH . 
D 4 HOH A 57 757 98 HOH HOH . 
D 4 HOH A 58 758 74 HOH HOH . 
D 4 HOH A 59 759 104 HOH HOH . 
D 4 HOH A 60 760 43 HOH HOH . 
D 4 HOH A 61 761 106 HOH HOH . 
D 4 HOH A 62 762 102 HOH HOH . 
D 4 HOH A 63 763 115 HOH HOH . 
D 4 HOH A 64 764 75 HOH HOH . 
D 4 HOH A 65 765 88 HOH HOH . 
D 4 HOH A 66 766 70 HOH HOH . 
D 4 HOH A 67 767 92 HOH HOH . 
D 4 HOH A 68 768 23 HOH HOH . 
D 4 HOH A 69 769 37 HOH HOH . 
D 4 HOH A 70 770 21 HOH HOH . 
D 4 HOH A 71 771 47 HOH HOH . 
D 4 HOH A 72 772 16 HOH HOH . 
D 4 HOH A 73 773 40 HOH HOH . 
D 4 HOH A 74 774 107 HOH HOH . 
D 4 HOH A 75 775 51 HOH HOH . 
D 4 HOH A 76 776 30 HOH HOH . 
D 4 HOH A 77 777 28 HOH HOH . 
D 4 HOH A 78 778 87 HOH HOH . 
D 4 HOH A 79 779 39 HOH HOH . 
D 4 HOH A 80 780 95 HOH HOH . 
D 4 HOH A 81 781 81 HOH HOH . 
D 4 HOH A 82 782 36 HOH HOH . 
D 4 HOH A 83 783 45 HOH HOH . 
D 4 HOH A 84 784 50 HOH HOH . 
D 4 HOH A 85 785 77 HOH HOH . 
D 4 HOH A 86 786 4 HOH HOH . 
D 4 HOH A 87 787 118 HOH HOH . 
D 4 HOH A 88 788 9 HOH HOH . 
D 4 HOH A 89 789 41 HOH HOH . 
D 4 HOH A 90 790 97 HOH HOH . 
D 4 HOH A 91 791 101 HOH HOH . 
D 4 HOH A 92 792 58 HOH HOH . 
D 4 HOH A 93 793 78 HOH HOH . 
D 4 HOH A 94 794 120 HOH HOH . 
D 4 HOH A 95 795 114 HOH HOH . 
D 4 HOH A 96 796 94 HOH HOH . 
D 4 HOH A 97 797 122 HOH HOH . 
D 4 HOH A 98 798 85 HOH HOH . 
D 4 HOH A 99 799 90 HOH HOH . 
D 4 HOH A 100 800 93 HOH HOH . 
D 4 HOH A 101 801 86 HOH HOH . 
D 4 HOH A 102 802 119 HOH HOH . 
D 4 HOH A 103 803 64 HOH HOH . 
D 4 HOH A 104 804 103 HOH HOH . 
D 4 HOH A 105 805 67 HOH HOH . 
D 4 HOH A 106 806 117 HOH HOH . 
D 4 HOH A 107 807 105 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 E3N . . . B 2 -10.52 -30.257 -33.82 1 54.63 ? C10 E3N 601 A 1 
HETATM 2 C C13 E3N . . . B 2 -9.625 -33.237 -35.268 1 79.18 ? C13 E3N 601 A 1 
HETATM 3 C C15 E3N . . . B 2 -10.983 -33.124 -34.614 1 85.55 ? C15 E3N 601 A 1 
HETATM 4 C C20 E3N . . . B 2 -12.572 -27.363 -35.564 1 57.1 ? C20 E3N 601 A 1 
HETATM 5 C C22 E3N . . . B 2 -15.929 -24.369 -39.054 1 58.85 ? C22 E3N 601 A 1 
HETATM 6 C C24 E3N . . . B 2 -18.022 -24.696 -37.678 1 67.86 ? C24 E3N 601 A 1 
HETATM 7 C C26 E3N . . . B 2 -20.205 -24.038 -38.43 1 78.88 ? C26 E3N 601 A 1 
HETATM 8 C C28 E3N . . . B 2 -22.306 -24.783 -37.552 1 83.28 ? C28 E3N 601 A 1 
HETATM 9 C C02 E3N . . . B 2 -14.057 -25.201 -37.575 1 50.63 ? C02 E3N 601 A 1 
HETATM 10 C C04 E3N . . . B 2 -12.167 -25.975 -36.051 1 52.02 ? C04 E3N 601 A 1 
HETATM 11 C C05 E3N . . . B 2 -11.358 -25.355 -34.914 1 44.55 ? C05 E3N 601 A 1 
HETATM 12 C C06 E3N . . . B 2 -10.164 -26.194 -34.59 1 45.77 ? C06 E3N 601 A 1 
HETATM 13 C C08 E3N . . . B 2 -11.436 -28.206 -35.048 1 52.11 ? C08 E3N 601 A 1 
HETATM 14 C C09 E3N . . . B 2 -11.746 -29.488 -34.35 1 56.61 ? C09 E3N 601 A 1 
HETATM 15 C C14 E3N . . . B 2 -9.895 -33.449 -36.745 1 73.57 ? C14 E3N 601 A 1 
HETATM 16 C C18 E3N . . . B 2 -9.27 -29.434 -35.768 1 63.6 ? C18 E3N 601 A 1 
HETATM 17 C C19 E3N . . . B 2 -10.469 -28.588 -36.133 1 56.15 ? C19 E3N 601 A 1 
HETATM 18 C C23 E3N . . . B 2 -17.397 -24.259 -38.822 1 63.19 ? C23 E3N 601 A 1 
HETATM 19 C C25 E3N . . . B 2 -19.398 -24.597 -37.462 1 75.29 ? C25 E3N 601 A 1 
HETATM 20 C C32 E3N . . . B 2 -19.615 -23.593 -39.57 1 80.29 ? C32 E3N 601 A 1 
HETATM 21 C C33 E3N . . . B 2 -18.246 -23.703 -39.737 1 74.6 ? C33 E3N 601 A 1 
HETATM 22 F F29 E3N . . . B 2 -22.203 -26.009 -37.988 0.58 82.69 ? F29 E3N 601 A 1 
HETATM 23 F F30 E3N . . . B 2 -23.583 -24.407 -37.628 0.54 85.18 ? F30 E3N 601 A 1 
HETATM 24 F F31 E3N . . . B 2 -22.08 -24.849 -36.254 0.58 80.44 ? F31 E3N 601 A 1 
HETATM 25 N N03 E3N . . . B 2 -13.278 -25.14 -36.433 1 53.62 ? N03 E3N 601 A 1 
HETATM 26 N N11 E3N . . . B 2 -9.449 -30.56 -34.811 1 74.03 ? N11 E3N 601 A 1 
HETATM 27 N N21 E3N . . . B 2 -15.091 -24.334 -37.882 1 55.75 ? N21 E3N 601 A 1 
HETATM 28 O O01 E3N . . . B 2 -13.792 -26.084 -38.368 1 55.74 ? O01 E3N 601 A 1 
HETATM 29 O O07 E3N . . . B 2 -10.501 -27.488 -34.333 1 45.32 ? O07 E3N 601 A 1 
HETATM 30 O O16 E3N . . . B 2 -7.758 -31.822 -36.02 1 103.77 ? O16 E3N 601 A 1 
HETATM 31 O O17 E3N . . . B 2 -7.954 -32.173 -33.702 1 79.82 ? O17 E3N 601 A 1 
HETATM 32 O O27 E3N . . . B 2 -21.551 -23.891 -38.263 1 82.53 ? O27 E3N 601 A 1 
HETATM 33 S S12 E3N . . . B 2 -8.605 -31.959 -34.923 1 82.71 ? S12 E3N 601 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           33 
#