data_6FRA
#
_model_server_result.job_id            gLALEzYiN8o5FLKYn4IZGA 
_model_server_result.datetime_utc      '2025-07-18 16:31:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fra 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":307}' 
#
_entry.id    6FRA 
#
_exptl.entry_id    6FRA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6FRA 
_cell.length_a            85.71 
_cell.length_b            114.63 
_cell.length_c            50.66 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FRA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf2 A SG CYS 23 A CYS 23 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf3 A SG CYS 23 A CYS 23 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.118 ? 
disulf ? disulf4 A SG CYS 134 A CYS 135 1_555 A SG CYS 184 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf5 A SG CYS 159 A CYS 160 1_555 B SG CYS 167 B CYS 167 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 A SG CYS 159 A CYS 160 1_555 B SG CYS 167 B CYS 167 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf7 B SG CYS 22 B CYS 22 1_555 B SG CYS 90 B CYS 90 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.159 ? 
disulf ? disulf8 B SG CYS 22 B CYS 22 1_555 B SG CYS 90 B CYS 90 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.866 ? 
disulf ? disulf9 B SG CYS 141 B CYS 141 1_555 B SG CYS 206 B CYS 206 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.013 ? 
disulf ? disulf10 B SG CYS 141 B CYS 141 1_555 B SG CYS 206 B CYS 206 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.064 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6FRA 
_atom_sites.fract_transf_matrix[1][1]    0.011667 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008724 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019739 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 301 301 EDO EDO . 
D 3 EDO A 1 302 302 EDO EDO . 
E 3 EDO A 1 303 303 EDO EDO . 
F 3 EDO A 1 304 304 EDO EDO . 
G 3 EDO A 1 305 307 EDO EDO . 
H 3 EDO A 1 306 308 EDO EDO . 
I 3 EDO A 1 307 310 EDO EDO . 
J 4 SO4 A 1 308 321 SO4 SO4 . 
K 4 SO4 A 1 309 323 SO4 SO4 . 
L 3 EDO B 1 301 305 EDO EDO . 
M 3 EDO B 1 302 306 EDO EDO . 
N 3 EDO B 1 303 309 EDO EDO . 
O 4 SO4 B 1 304 322 SO4 SO4 . 
P 4 SO4 B 1 305 324 SO4 SO4 . 
Q 4 SO4 B 1 306 325 SO4 SO4 . 
R 5 HOH A 1 401 433 HOH HOH . 
R 5 HOH A 2 402 542 HOH HOH . 
R 5 HOH A 3 403 406 HOH HOH . 
R 5 HOH A 4 404 437 HOH HOH . 
R 5 HOH A 5 405 463 HOH HOH . 
R 5 HOH A 6 406 415 HOH HOH . 
R 5 HOH A 7 407 514 HOH HOH . 
R 5 HOH A 8 408 534 HOH HOH . 
R 5 HOH A 9 409 480 HOH HOH . 
R 5 HOH A 10 410 458 HOH HOH . 
R 5 HOH A 11 411 422 HOH HOH . 
R 5 HOH A 12 412 516 HOH HOH . 
R 5 HOH A 13 413 432 HOH HOH . 
R 5 HOH A 14 414 506 HOH HOH . 
R 5 HOH A 15 415 426 HOH HOH . 
R 5 HOH A 16 416 533 HOH HOH . 
R 5 HOH A 17 417 469 HOH HOH . 
R 5 HOH A 18 418 457 HOH HOH . 
R 5 HOH A 19 419 472 HOH HOH . 
R 5 HOH A 20 420 485 HOH HOH . 
R 5 HOH A 21 421 541 HOH HOH . 
R 5 HOH A 22 422 471 HOH HOH . 
R 5 HOH A 23 423 521 HOH HOH . 
R 5 HOH A 24 424 443 HOH HOH . 
R 5 HOH A 25 425 412 HOH HOH . 
R 5 HOH A 26 426 401 HOH HOH . 
R 5 HOH A 27 427 510 HOH HOH . 
R 5 HOH A 28 428 482 HOH HOH . 
R 5 HOH A 29 429 434 HOH HOH . 
R 5 HOH A 30 430 428 HOH HOH . 
R 5 HOH A 31 431 496 HOH HOH . 
R 5 HOH A 32 432 503 HOH HOH . 
R 5 HOH A 33 433 527 HOH HOH . 
R 5 HOH A 34 434 508 HOH HOH . 
R 5 HOH A 35 435 460 HOH HOH . 
R 5 HOH A 36 436 529 HOH HOH . 
R 5 HOH A 37 437 523 HOH HOH . 
R 5 HOH A 38 438 439 HOH HOH . 
R 5 HOH A 39 439 478 HOH HOH . 
R 5 HOH A 40 440 509 HOH HOH . 
R 5 HOH A 41 441 408 HOH HOH . 
R 5 HOH A 42 442 445 HOH HOH . 
R 5 HOH A 43 443 425 HOH HOH . 
R 5 HOH A 44 444 403 HOH HOH . 
R 5 HOH A 45 445 476 HOH HOH . 
R 5 HOH A 46 446 405 HOH HOH . 
R 5 HOH A 47 447 515 HOH HOH . 
R 5 HOH A 48 448 447 HOH HOH . 
R 5 HOH A 49 449 417 HOH HOH . 
R 5 HOH A 50 450 487 HOH HOH . 
R 5 HOH A 51 451 404 HOH HOH . 
R 5 HOH A 52 452 465 HOH HOH . 
R 5 HOH A 53 453 464 HOH HOH . 
R 5 HOH A 54 454 513 HOH HOH . 
R 5 HOH A 55 455 456 HOH HOH . 
R 5 HOH A 56 456 461 HOH HOH . 
R 5 HOH A 57 457 444 HOH HOH . 
R 5 HOH A 58 458 424 HOH HOH . 
R 5 HOH A 59 459 539 HOH HOH . 
R 5 HOH A 60 460 430 HOH HOH . 
R 5 HOH A 61 461 429 HOH HOH . 
R 5 HOH A 62 462 477 HOH HOH . 
R 5 HOH A 63 463 531 HOH HOH . 
R 5 HOH A 64 464 483 HOH HOH . 
R 5 HOH A 65 465 512 HOH HOH . 
R 5 HOH A 66 466 530 HOH HOH . 
R 5 HOH A 67 467 448 HOH HOH . 
S 5 HOH B 1 401 504 HOH HOH . 
S 5 HOH B 2 402 492 HOH HOH . 
S 5 HOH B 3 403 543 HOH HOH . 
S 5 HOH B 4 404 538 HOH HOH . 
S 5 HOH B 5 405 468 HOH HOH . 
S 5 HOH B 6 406 517 HOH HOH . 
S 5 HOH B 7 407 481 HOH HOH . 
S 5 HOH B 8 408 525 HOH HOH . 
S 5 HOH B 9 409 441 HOH HOH . 
S 5 HOH B 10 410 499 HOH HOH . 
S 5 HOH B 11 411 540 HOH HOH . 
S 5 HOH B 12 412 459 HOH HOH . 
S 5 HOH B 13 413 442 HOH HOH . 
S 5 HOH B 14 414 409 HOH HOH . 
S 5 HOH B 15 415 537 HOH HOH . 
S 5 HOH B 16 416 421 HOH HOH . 
S 5 HOH B 17 417 502 HOH HOH . 
S 5 HOH B 18 418 414 HOH HOH . 
S 5 HOH B 19 419 411 HOH HOH . 
S 5 HOH B 20 420 507 HOH HOH . 
S 5 HOH B 21 421 490 HOH HOH . 
S 5 HOH B 22 422 520 HOH HOH . 
S 5 HOH B 23 423 455 HOH HOH . 
S 5 HOH B 24 424 419 HOH HOH . 
S 5 HOH B 25 425 423 HOH HOH . 
S 5 HOH B 26 426 500 HOH HOH . 
S 5 HOH B 27 427 488 HOH HOH . 
S 5 HOH B 28 428 518 HOH HOH . 
S 5 HOH B 29 429 511 HOH HOH . 
S 5 HOH B 30 430 493 HOH HOH . 
S 5 HOH B 31 431 407 HOH HOH . 
S 5 HOH B 32 432 451 HOH HOH . 
S 5 HOH B 33 433 450 HOH HOH . 
S 5 HOH B 34 434 431 HOH HOH . 
S 5 HOH B 35 435 453 HOH HOH . 
S 5 HOH B 36 436 495 HOH HOH . 
S 5 HOH B 37 437 522 HOH HOH . 
S 5 HOH B 38 438 473 HOH HOH . 
S 5 HOH B 39 439 438 HOH HOH . 
S 5 HOH B 40 440 494 HOH HOH . 
S 5 HOH B 41 441 501 HOH HOH . 
S 5 HOH B 42 442 449 HOH HOH . 
S 5 HOH B 43 443 535 HOH HOH . 
S 5 HOH B 44 444 524 HOH HOH . 
S 5 HOH B 45 445 498 HOH HOH . 
S 5 HOH B 46 446 536 HOH HOH . 
S 5 HOH B 47 447 446 HOH HOH . 
S 5 HOH B 48 448 475 HOH HOH . 
S 5 HOH B 49 449 474 HOH HOH . 
S 5 HOH B 50 450 486 HOH HOH . 
S 5 HOH B 51 451 526 HOH HOH . 
S 5 HOH B 52 452 462 HOH HOH . 
S 5 HOH B 53 453 436 HOH HOH . 
S 5 HOH B 54 454 484 HOH HOH . 
S 5 HOH B 55 455 479 HOH HOH . 
S 5 HOH B 56 456 505 HOH HOH . 
S 5 HOH B 57 457 454 HOH HOH . 
S 5 HOH B 58 458 519 HOH HOH . 
S 5 HOH B 59 459 416 HOH HOH . 
S 5 HOH B 60 460 532 HOH HOH . 
S 5 HOH B 61 461 489 HOH HOH . 
S 5 HOH B 62 462 528 HOH HOH . 
S 5 HOH B 63 463 491 HOH HOH . 
S 5 HOH B 64 464 467 HOH HOH . 
S 5 HOH B 65 465 470 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 3 1.613 -1.801 -19.61 1 47.46 ? C1 EDO 307 A 1 
HETATM 2 O O1 EDO . . . I 3 1.067 -2.794 -18.735 1 38.97 ? O1 EDO 307 A 1 
HETATM 3 C C2 EDO . . . I 3 0.367 -1.023 -19.9 1 44.82 ? C2 EDO 307 A 1 
HETATM 4 O O2 EDO . . . I 3 0.455 -0.465 -21.224 1 143.23 ? O2 EDO 307 A 1 
#
_model_server_stats.io_time_ms              89 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           648 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           4 
#