data_6FRD # _model_server_result.job_id VQo6iK3dqcb-eofKJ2swag _model_server_result.datetime_utc '2024-12-22 06:26:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6frd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 6FRD # _exptl.entry_id 6FRD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.89 _cell.angle_gamma 90 _cell.entry_id 6FRD _cell.length_a 113.98 _cell.length_b 113.48 _cell.length_c 68.22 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FRD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,Q 1 1 B,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 115 A HIS 673 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc2 A NE2 HIS 151 A HIS 709 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc3 A OD2 ASP 152 A ASP 710 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc4 A OD1 ASP 152 A ASP 710 1_555 D MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc5 A OD1 ASP 264 A ASP 822 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc6 C ZN ZN . A ZN 1001 1_555 Q O HOH . A HOH 1116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc7 C ZN ZN . A ZN 1001 1_555 Q O HOH . A HOH 1146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc8 D MG MG . A MG 1002 1_555 Q O HOH . A HOH 1116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc9 D MG MG . A MG 1002 1_555 Q O HOH . A HOH 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc10 D MG MG . A MG 1002 1_555 Q O HOH . A HOH 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc11 D MG MG . A MG 1002 1_555 Q O HOH . A HOH 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc12 D MG MG . A MG 1002 1_555 Q O HOH . A HOH 1172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc13 B NE2 HIS 115 B HIS 673 1_555 K ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc14 B NE2 HIS 151 B HIS 709 1_555 K ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc15 B OD2 ASP 152 B ASP 710 1_555 K ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc16 B OD1 ASP 152 B ASP 710 1_555 L MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc17 B OD1 ASP 264 B ASP 822 1_555 K ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc18 K ZN ZN . B ZN 1001 1_555 R O HOH . B HOH 1114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc19 L MG MG . B MG 1002 1_555 R O HOH . B HOH 1114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc20 L MG MG . B MG 1002 1_555 R O HOH . B HOH 1137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc21 L MG MG . B MG 1002 1_555 R O HOH . B HOH 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc22 L MG MG . B MG 1002 1_555 R O HOH . B HOH 1159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc23 L MG MG . B MG 1002 1_555 R O HOH . B HOH 1165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6FRD _atom_sites.fract_transf_matrix[1][1] 0.008773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002832 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008812 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015403 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 919 ZN ZN . D 3 MG A 1 1002 920 MG MG . E 4 GAI A 1 1003 921 GAI GAI . F 4 GAI A 1 1004 922 GAI GAI . G 4 GAI A 1 1005 923 GAI GAI . H 5 FMT A 1 1006 924 FMT FMT . I 5 FMT A 1 1007 925 FMT FMT . J 4 GAI A 1 1008 926 GAI GAI . K 2 ZN B 1 1001 918 ZN ZN . L 3 MG B 1 1002 919 MG MG . M 4 GAI B 1 1003 920 GAI GAI . N 4 GAI B 1 1004 921 GAI GAI . O 4 GAI B 1 1005 922 GAI GAI . P 6 E3Q B 1 1006 923 E3Q 637 . Q 7 HOH A 1 1101 945 HOH HOH . Q 7 HOH A 2 1102 1007 HOH HOH . Q 7 HOH A 3 1103 982 HOH HOH . Q 7 HOH A 4 1104 1013 HOH HOH . Q 7 HOH A 5 1105 970 HOH HOH . Q 7 HOH A 6 1106 968 HOH HOH . Q 7 HOH A 7 1107 1005 HOH HOH . Q 7 HOH A 8 1108 975 HOH HOH . Q 7 HOH A 9 1109 994 HOH HOH . Q 7 HOH A 10 1110 956 HOH HOH . Q 7 HOH A 11 1111 935 HOH HOH . Q 7 HOH A 12 1112 930 HOH HOH . Q 7 HOH A 13 1113 950 HOH HOH . Q 7 HOH A 14 1114 1008 HOH HOH . Q 7 HOH A 15 1115 932 HOH HOH . Q 7 HOH A 16 1116 938 HOH HOH . Q 7 HOH A 17 1117 1012 HOH HOH . Q 7 HOH A 18 1118 1010 HOH HOH . Q 7 HOH A 19 1119 941 HOH HOH . Q 7 HOH A 20 1120 953 HOH HOH . Q 7 HOH A 21 1121 942 HOH HOH . Q 7 HOH A 22 1122 969 HOH HOH . Q 7 HOH A 23 1123 943 HOH HOH . Q 7 HOH A 24 1124 933 HOH HOH . Q 7 HOH A 25 1125 947 HOH HOH . Q 7 HOH A 26 1126 1014 HOH HOH . Q 7 HOH A 27 1127 936 HOH HOH . Q 7 HOH A 28 1128 993 HOH HOH . Q 7 HOH A 29 1129 995 HOH HOH . Q 7 HOH A 30 1130 1001 HOH HOH . Q 7 HOH A 31 1131 977 HOH HOH . Q 7 HOH A 32 1132 1000 HOH HOH . Q 7 HOH A 33 1133 954 HOH HOH . Q 7 HOH A 34 1134 957 HOH HOH . Q 7 HOH A 35 1135 944 HOH HOH . Q 7 HOH A 36 1136 972 HOH HOH . Q 7 HOH A 37 1137 987 HOH HOH . Q 7 HOH A 38 1138 971 HOH HOH . Q 7 HOH A 39 1139 948 HOH HOH . Q 7 HOH A 40 1140 952 HOH HOH . Q 7 HOH A 41 1141 962 HOH HOH . Q 7 HOH A 42 1142 986 HOH HOH . Q 7 HOH A 43 1143 988 HOH HOH . Q 7 HOH A 44 1144 951 HOH HOH . Q 7 HOH A 45 1145 960 HOH HOH . Q 7 HOH A 46 1146 929 HOH HOH . Q 7 HOH A 47 1147 934 HOH HOH . Q 7 HOH A 48 1148 966 HOH HOH . Q 7 HOH A 49 1149 1015 HOH HOH . Q 7 HOH A 50 1150 937 HOH HOH . Q 7 HOH A 51 1151 927 HOH HOH . Q 7 HOH A 52 1152 931 HOH HOH . Q 7 HOH A 53 1153 959 HOH HOH . Q 7 HOH A 54 1154 940 HOH HOH . Q 7 HOH A 55 1155 978 HOH HOH . Q 7 HOH A 56 1156 1003 HOH HOH . Q 7 HOH A 57 1157 955 HOH HOH . Q 7 HOH A 58 1158 1002 HOH HOH . Q 7 HOH A 59 1159 928 HOH HOH . Q 7 HOH A 60 1160 961 HOH HOH . Q 7 HOH A 61 1161 951 HOH HOH . Q 7 HOH A 62 1162 963 HOH HOH . Q 7 HOH A 63 1163 989 HOH HOH . Q 7 HOH A 64 1164 999 HOH HOH . Q 7 HOH A 65 1165 992 HOH HOH . Q 7 HOH A 66 1166 964 HOH HOH . Q 7 HOH A 67 1167 979 HOH HOH . Q 7 HOH A 68 1168 990 HOH HOH . Q 7 HOH A 69 1169 958 HOH HOH . Q 7 HOH A 70 1170 973 HOH HOH . Q 7 HOH A 71 1171 991 HOH HOH . Q 7 HOH A 72 1172 939 HOH HOH . Q 7 HOH A 73 1173 946 HOH HOH . Q 7 HOH A 74 1174 997 HOH HOH . Q 7 HOH A 75 1175 976 HOH HOH . Q 7 HOH A 76 1176 965 HOH HOH . Q 7 HOH A 77 1177 981 HOH HOH . Q 7 HOH A 78 1178 980 HOH HOH . Q 7 HOH A 79 1179 949 HOH HOH . Q 7 HOH A 80 1180 967 HOH HOH . Q 7 HOH A 81 1181 974 HOH HOH . Q 7 HOH A 82 1182 984 HOH HOH . Q 7 HOH A 83 1183 1016 HOH HOH . Q 7 HOH A 84 1184 998 HOH HOH . Q 7 HOH A 85 1185 1011 HOH HOH . Q 7 HOH A 86 1186 983 HOH HOH . Q 7 HOH A 87 1187 985 HOH HOH . Q 7 HOH A 88 1188 1004 HOH HOH . Q 7 HOH A 89 1189 1006 HOH HOH . Q 7 HOH A 90 1190 996 HOH HOH . R 7 HOH B 1 1101 929 HOH HOH . R 7 HOH B 2 1102 958 HOH HOH . R 7 HOH B 3 1103 1008 HOH HOH . R 7 HOH B 4 1104 1006 HOH HOH . R 7 HOH B 5 1105 975 HOH HOH . R 7 HOH B 6 1106 941 HOH HOH . R 7 HOH B 7 1107 1004 HOH HOH . R 7 HOH B 8 1108 968 HOH HOH . R 7 HOH B 9 1109 981 HOH HOH . R 7 HOH B 10 1110 976 HOH HOH . R 7 HOH B 11 1111 955 HOH HOH . R 7 HOH B 12 1112 994 HOH HOH . R 7 HOH B 13 1113 962 HOH HOH . R 7 HOH B 14 1114 934 HOH HOH . R 7 HOH B 15 1115 959 HOH HOH . R 7 HOH B 16 1116 930 HOH HOH . R 7 HOH B 17 1117 964 HOH HOH . R 7 HOH B 18 1118 991 HOH HOH . R 7 HOH B 19 1119 960 HOH HOH . R 7 HOH B 20 1120 1009 HOH HOH . R 7 HOH B 21 1121 942 HOH HOH . R 7 HOH B 22 1122 926 HOH HOH . R 7 HOH B 23 1123 993 HOH HOH . R 7 HOH B 24 1124 1014 HOH HOH . R 7 HOH B 25 1125 940 HOH HOH . R 7 HOH B 26 1126 986 HOH HOH . R 7 HOH B 27 1127 989 HOH HOH . R 7 HOH B 28 1128 948 HOH HOH . R 7 HOH B 29 1129 1012 HOH HOH . R 7 HOH B 30 1130 963 HOH HOH . R 7 HOH B 31 1131 982 HOH HOH . R 7 HOH B 32 1132 970 HOH HOH . R 7 HOH B 33 1133 1005 HOH HOH . R 7 HOH B 34 1134 1020 HOH HOH . R 7 HOH B 35 1135 947 HOH HOH . R 7 HOH B 36 1136 953 HOH HOH . R 7 HOH B 37 1137 945 HOH HOH . R 7 HOH B 38 1138 939 HOH HOH . R 7 HOH B 39 1139 927 HOH HOH . R 7 HOH B 40 1140 952 HOH HOH . R 7 HOH B 41 1141 931 HOH HOH . R 7 HOH B 42 1142 932 HOH HOH . R 7 HOH B 43 1143 987 HOH HOH . R 7 HOH B 44 1144 1019 HOH HOH . R 7 HOH B 45 1145 979 HOH HOH . R 7 HOH B 46 1146 961 HOH HOH . R 7 HOH B 47 1147 988 HOH HOH . R 7 HOH B 48 1148 983 HOH HOH . R 7 HOH B 49 1149 946 HOH HOH . R 7 HOH B 50 1150 936 HOH HOH . R 7 HOH B 51 1151 1000 HOH HOH . R 7 HOH B 52 1152 949 HOH HOH . R 7 HOH B 53 1153 956 HOH HOH . R 7 HOH B 54 1154 950 HOH HOH . R 7 HOH B 55 1155 998 HOH HOH . R 7 HOH B 56 1156 924 HOH HOH . R 7 HOH B 57 1157 1010 HOH HOH . R 7 HOH B 58 1158 995 HOH HOH . R 7 HOH B 59 1159 935 HOH HOH . R 7 HOH B 60 1160 984 HOH HOH . R 7 HOH B 61 1161 1022 HOH HOH . R 7 HOH B 62 1162 972 HOH HOH . R 7 HOH B 63 1163 1021 HOH HOH . R 7 HOH B 64 1164 971 HOH HOH . R 7 HOH B 65 1165 937 HOH HOH . R 7 HOH B 66 1166 999 HOH HOH . R 7 HOH B 67 1167 990 HOH HOH . R 7 HOH B 68 1168 1011 HOH HOH . R 7 HOH B 69 1169 1001 HOH HOH . R 7 HOH B 70 1170 928 HOH HOH . R 7 HOH B 71 1171 954 HOH HOH . R 7 HOH B 72 1172 944 HOH HOH . R 7 HOH B 73 1173 957 HOH HOH . R 7 HOH B 74 1174 978 HOH HOH . R 7 HOH B 75 1175 938 HOH HOH . R 7 HOH B 76 1176 966 HOH HOH . R 7 HOH B 77 1177 933 HOH HOH . R 7 HOH B 78 1178 1003 HOH HOH . R 7 HOH B 79 1179 974 HOH HOH . R 7 HOH B 80 1180 967 HOH HOH . R 7 HOH B 81 1181 973 HOH HOH . R 7 HOH B 82 1182 1017 HOH HOH . R 7 HOH B 83 1183 996 HOH HOH . R 7 HOH B 84 1184 925 HOH HOH . R 7 HOH B 85 1185 1002 HOH HOH . R 7 HOH B 86 1186 1013 HOH HOH . R 7 HOH B 87 1187 980 HOH HOH . R 7 HOH B 88 1188 943 HOH HOH . R 7 HOH B 89 1189 1018 HOH HOH . R 7 HOH B 90 1190 969 HOH HOH . R 7 HOH B 91 1191 1015 HOH HOH . R 7 HOH B 92 1192 977 HOH HOH . R 7 HOH B 93 1193 992 HOH HOH . R 7 HOH B 94 1194 1016 HOH HOH . R 7 HOH B 95 1195 997 HOH HOH . R 7 HOH B 96 1196 985 HOH HOH . R 7 HOH B 97 1197 965 HOH HOH . R 7 HOH B 98 1198 1009 HOH HOH . R 7 HOH B 99 1199 1007 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.246 _atom_site.Cartn_y 0.045 _atom_site.Cartn_z 37.359 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #