data_6FSD # _model_server_result.job_id n8cloEPSNJfagctb3xv4Ww _model_server_result.datetime_utc '2025-01-10 23:45:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fsd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 6FSD # _exptl.entry_id 6FSD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.47 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(4-phenylphenoxy)-~{N}-(3-piperidin-1-ylpropyl)ethanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FSD _cell.length_a 78.013 _cell.length_b 110.327 _cell.length_c 227.261 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FSD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 69 A CYS 69 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 257 A CYS 257 1_555 A SG CYS 272 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 A SG CYS 409 A CYS 409 1_555 A SG CYS 529 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 B SG CYS 69 B CYS 69 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf5 B SG CYS 257 B CYS 257 1_555 B SG CYS 272 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? disulf ? disulf6 B SG CYS 409 B CYS 409 1_555 B SG CYS 529 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'C22 H28 N2 O2' _chem_comp.formula_weight 352.47 _chem_comp.id E5H _chem_comp.mon_nstd_flag . _chem_comp.name 2-(4-phenylphenoxy)-~{N}-(3-piperidin-1-ylpropyl)ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 C10 E5H sing 123 n n C09 C08 E5H sing 124 n n C10 C11 E5H sing 125 n n C17 C16 E5H doub 126 n y C17 C18 E5H sing 127 n y C08 N07 E5H sing 128 n n C16 C15 E5H sing 129 n y C19 C18 E5H sing 130 n n C18 C25 E5H doub 131 n y C11 C12 E5H sing 132 n n N07 C12 E5H sing 133 n n N07 C06 E5H sing 134 n n C15 O14 E5H sing 135 n n C15 C26 E5H doub 136 n y O14 C13 E5H sing 137 n n C05 C04 E5H sing 138 n n C05 C06 E5H sing 139 n n C25 C26 E5H sing 140 n y N03 C04 E5H sing 141 n n N03 C02 E5H sing 142 n n C13 C02 E5H sing 143 n n C02 O01 E5H doub 144 n n N03 H1 E5H sing 145 n n C04 H2 E5H sing 146 n n C04 H3 E5H sing 147 n n C05 H4 E5H sing 148 n n C05 H5 E5H sing 149 n n C06 H6 E5H sing 150 n n C06 H7 E5H sing 151 n n C08 H9 E5H sing 152 n n C08 H10 E5H sing 153 n n C09 H11 E5H sing 154 n n C09 H12 E5H sing 155 n n C10 H13 E5H sing 156 n n C10 H14 E5H sing 157 n n C11 H15 E5H sing 158 n n C11 H16 E5H sing 159 n n C12 H17 E5H sing 160 n n C12 H18 E5H sing 161 n n C13 H19 E5H sing 162 n n C13 H20 E5H sing 163 n n C16 H21 E5H sing 164 n n C17 H22 E5H sing 165 n n C25 H26 E5H sing 166 n n C26 H27 E5H sing 167 n n C19 C1 E5H sing 168 n y C1 C2 E5H doub 169 n y C2 C3 E5H sing 170 n y C3 C4 E5H doub 171 n y C4 C5 E5H sing 172 n y C5 C19 E5H doub 173 n y C1 H8 E5H sing 174 n n C2 H23 E5H sing 175 n n C3 H24 E5H sing 176 n n C4 H25 E5H sing 177 n n C5 H28 E5H sing 178 n n # _atom_sites.entry_id 6FSD _atom_sites.fract_transf_matrix[1][1] 0.012818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009064 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0044 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E5H A 1 601 1 E5H 264 . D 3 TOE A 1 602 1 TOE P3G . E 4 PG0 A 1 603 2 PG0 P2G . F 2 E5H B 1 601 2 E5H 264 . G 5 1PG B 1 602 1 1PG P5G . H 4 PG0 B 1 603 1 PG0 P2G . I 6 HOH A 1 701 78 HOH HOH . I 6 HOH A 2 702 159 HOH HOH . I 6 HOH A 3 703 6 HOH HOH . I 6 HOH A 4 704 294 HOH HOH . I 6 HOH A 5 705 35 HOH HOH . I 6 HOH A 6 706 288 HOH HOH . I 6 HOH A 7 707 39 HOH HOH . I 6 HOH A 8 708 58 HOH HOH . I 6 HOH A 9 709 203 HOH HOH . I 6 HOH A 10 710 98 HOH HOH . I 6 HOH A 11 711 34 HOH HOH . I 6 HOH A 12 712 282 HOH HOH . I 6 HOH A 13 713 25 HOH HOH . I 6 HOH A 14 714 129 HOH HOH . I 6 HOH A 15 715 298 HOH HOH . I 6 HOH A 16 716 149 HOH HOH . I 6 HOH A 17 717 263 HOH HOH . I 6 HOH A 18 718 23 HOH HOH . I 6 HOH A 19 719 15 HOH HOH . I 6 HOH A 20 720 18 HOH HOH . I 6 HOH A 21 721 100 HOH HOH . I 6 HOH A 22 722 44 HOH HOH . I 6 HOH A 23 723 166 HOH HOH . I 6 HOH A 24 724 190 HOH HOH . I 6 HOH A 25 725 9 HOH HOH . I 6 HOH A 26 726 163 HOH HOH . I 6 HOH A 27 727 28 HOH HOH . I 6 HOH A 28 728 184 HOH HOH . I 6 HOH A 29 729 55 HOH HOH . I 6 HOH A 30 730 85 HOH HOH . I 6 HOH A 31 731 151 HOH HOH . I 6 HOH A 32 732 144 HOH HOH . I 6 HOH A 33 733 54 HOH HOH . I 6 HOH A 34 734 289 HOH HOH . I 6 HOH A 35 735 31 HOH HOH . I 6 HOH A 36 736 167 HOH HOH . I 6 HOH A 37 737 171 HOH HOH . I 6 HOH A 38 738 162 HOH HOH . I 6 HOH A 39 739 152 HOH HOH . I 6 HOH A 40 740 249 HOH HOH . I 6 HOH A 41 741 211 HOH HOH . I 6 HOH A 42 742 188 HOH HOH . I 6 HOH A 43 743 59 HOH HOH . I 6 HOH A 44 744 266 HOH HOH . I 6 HOH A 45 745 67 HOH HOH . I 6 HOH A 46 746 275 HOH HOH . I 6 HOH A 47 747 46 HOH HOH . I 6 HOH A 48 748 183 HOH HOH . I 6 HOH A 49 749 3 HOH HOH . I 6 HOH A 50 750 231 HOH HOH . I 6 HOH A 51 751 169 HOH HOH . I 6 HOH A 52 752 233 HOH HOH . I 6 HOH A 53 753 7 HOH HOH . I 6 HOH A 54 754 142 HOH HOH . I 6 HOH A 55 755 177 HOH HOH . I 6 HOH A 56 756 224 HOH HOH . I 6 HOH A 57 757 37 HOH HOH . I 6 HOH A 58 758 27 HOH HOH . I 6 HOH A 59 759 42 HOH HOH . I 6 HOH A 60 760 26 HOH HOH . I 6 HOH A 61 761 69 HOH HOH . I 6 HOH A 62 762 196 HOH HOH . I 6 HOH A 63 763 130 HOH HOH . I 6 HOH A 64 764 154 HOH HOH . I 6 HOH A 65 765 84 HOH HOH . I 6 HOH A 66 766 175 HOH HOH . I 6 HOH A 67 767 145 HOH HOH . I 6 HOH A 68 768 83 HOH HOH . I 6 HOH A 69 769 230 HOH HOH . I 6 HOH A 70 770 96 HOH HOH . I 6 HOH A 71 771 124 HOH HOH . I 6 HOH A 72 772 63 HOH HOH . I 6 HOH A 73 773 79 HOH HOH . I 6 HOH A 74 774 257 HOH HOH . I 6 HOH A 75 775 131 HOH HOH . I 6 HOH A 76 776 157 HOH HOH . I 6 HOH A 77 777 173 HOH HOH . I 6 HOH A 78 778 221 HOH HOH . I 6 HOH A 79 779 120 HOH HOH . I 6 HOH A 80 780 229 HOH HOH . I 6 HOH A 81 781 36 HOH HOH . I 6 HOH A 82 782 209 HOH HOH . I 6 HOH A 83 783 255 HOH HOH . I 6 HOH A 84 784 242 HOH HOH . I 6 HOH A 85 785 114 HOH HOH . I 6 HOH A 86 786 38 HOH HOH . I 6 HOH A 87 787 291 HOH HOH . I 6 HOH A 88 788 89 HOH HOH . I 6 HOH A 89 789 93 HOH HOH . J 6 HOH B 1 701 20 HOH HOH . J 6 HOH B 2 702 19 HOH HOH . J 6 HOH B 3 703 301 HOH HOH . J 6 HOH B 4 704 56 HOH HOH . J 6 HOH B 5 705 49 HOH HOH . J 6 HOH B 6 706 137 HOH HOH . J 6 HOH B 7 707 97 HOH HOH . J 6 HOH B 8 708 45 HOH HOH . J 6 HOH B 9 709 24 HOH HOH . J 6 HOH B 10 710 14 HOH HOH . J 6 HOH B 11 711 77 HOH HOH . J 6 HOH B 12 712 271 HOH HOH . J 6 HOH B 13 713 273 HOH HOH . J 6 HOH B 14 714 76 HOH HOH . J 6 HOH B 15 715 82 HOH HOH . J 6 HOH B 16 716 48 HOH HOH . J 6 HOH B 17 717 102 HOH HOH . J 6 HOH B 18 718 135 HOH HOH . J 6 HOH B 19 719 116 HOH HOH . J 6 HOH B 20 720 212 HOH HOH . J 6 HOH B 21 721 91 HOH HOH . J 6 HOH B 22 722 1 HOH HOH . J 6 HOH B 23 723 236 HOH HOH . J 6 HOH B 24 724 65 HOH HOH . J 6 HOH B 25 725 237 HOH HOH . J 6 HOH B 26 726 147 HOH HOH . J 6 HOH B 27 727 92 HOH HOH . J 6 HOH B 28 728 244 HOH HOH . J 6 HOH B 29 729 72 HOH HOH . J 6 HOH B 30 730 123 HOH HOH . J 6 HOH B 31 731 5 HOH HOH . J 6 HOH B 32 732 112 HOH HOH . J 6 HOH B 33 733 22 HOH HOH . J 6 HOH B 34 734 300 HOH HOH . J 6 HOH B 35 735 110 HOH HOH . J 6 HOH B 36 736 16 HOH HOH . J 6 HOH B 37 737 141 HOH HOH . J 6 HOH B 38 738 43 HOH HOH . J 6 HOH B 39 739 99 HOH HOH . J 6 HOH B 40 740 86 HOH HOH . J 6 HOH B 41 741 47 HOH HOH . J 6 HOH B 42 742 4 HOH HOH . J 6 HOH B 43 743 70 HOH HOH . J 6 HOH B 44 744 170 HOH HOH . J 6 HOH B 45 745 66 HOH HOH . J 6 HOH B 46 746 186 HOH HOH . J 6 HOH B 47 747 227 HOH HOH . J 6 HOH B 48 748 210 HOH HOH . J 6 HOH B 49 749 280 HOH HOH . J 6 HOH B 50 750 133 HOH HOH . J 6 HOH B 51 751 115 HOH HOH . J 6 HOH B 52 752 30 HOH HOH . J 6 HOH B 53 753 267 HOH HOH . J 6 HOH B 54 754 225 HOH HOH . J 6 HOH B 55 755 213 HOH HOH . J 6 HOH B 56 756 158 HOH HOH . J 6 HOH B 57 757 40 HOH HOH . J 6 HOH B 58 758 140 HOH HOH . J 6 HOH B 59 759 105 HOH HOH . J 6 HOH B 60 760 132 HOH HOH . J 6 HOH B 61 761 52 HOH HOH . J 6 HOH B 62 762 189 HOH HOH . J 6 HOH B 63 763 153 HOH HOH . J 6 HOH B 64 764 148 HOH HOH . J 6 HOH B 65 765 205 HOH HOH . J 6 HOH B 66 766 118 HOH HOH . J 6 HOH B 67 767 176 HOH HOH . J 6 HOH B 68 768 223 HOH HOH . J 6 HOH B 69 769 41 HOH HOH . J 6 HOH B 70 770 94 HOH HOH . J 6 HOH B 71 771 164 HOH HOH . J 6 HOH B 72 772 90 HOH HOH . J 6 HOH B 73 773 117 HOH HOH . J 6 HOH B 74 774 51 HOH HOH . J 6 HOH B 75 775 293 HOH HOH . J 6 HOH B 76 776 279 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 E5H . . . F 2 12.361 -6.821 -33.93 1 65.27 ? O01 E5H 601 B 1 HETATM 2 C C02 E5H . . . F 2 12.102 -7.533 -34.909 1 71.87 ? C02 E5H 601 B 1 HETATM 3 N N03 E5H . . . F 2 10.988 -7.222 -35.798 1 61.51 ? N03 E5H 601 B 1 HETATM 4 C C04 E5H . . . F 2 10.087 -6.046 -35.634 1 60.13 ? C04 E5H 601 B 1 HETATM 5 C C05 E5H . . . F 2 8.584 -6.261 -35.897 1 65.22 ? C05 E5H 601 B 1 HETATM 6 C C06 E5H . . . F 2 7.84 -4.94 -35.602 1 68.81 ? C06 E5H 601 B 1 HETATM 7 N N07 E5H . . . F 2 6.696 -4.757 -36.615 1 75.36 ? N07 E5H 601 B 1 HETATM 8 C C08 E5H . . . F 2 7.364 -4.164 -37.816 1 64.98 ? C08 E5H 601 B 1 HETATM 9 C C09 E5H . . . F 2 6.313 -3.732 -38.791 1 64.74 ? C09 E5H 601 B 1 HETATM 10 C C10 E5H . . . F 2 5.319 -2.772 -38.152 1 62.77 ? C10 E5H 601 B 1 HETATM 11 C C11 E5H . . . F 2 4.696 -3.357 -36.918 1 63.67 ? C11 E5H 601 B 1 HETATM 12 C C12 E5H . . . F 2 5.792 -3.731 -35.945 1 71.55 ? C12 E5H 601 B 1 HETATM 13 C C13 E5H . . . F 2 13.003 -8.825 -35.191 1 76.89 ? C13 E5H 601 B 1 HETATM 14 O O14 E5H . . . F 2 12.551 -9.754 -36.221 1 82.26 ? O14 E5H 601 B 1 HETATM 15 C C15 E5H . . . F 2 13.293 -10.955 -36.485 1 83.97 ? C15 E5H 601 B 1 HETATM 16 C C16 E5H . . . F 2 13.291 -11.563 -37.769 1 76.14 ? C16 E5H 601 B 1 HETATM 17 C C17 E5H . . . F 2 14.032 -12.759 -38.037 1 78.7 ? C17 E5H 601 B 1 HETATM 18 C C18 E5H . . . F 2 14.837 -13.484 -37.116 1 81.76 ? C18 E5H 601 B 1 HETATM 19 C C19 E5H . . . F 2 15.614 -14.782 -37.483 1 74.68 ? C19 E5H 601 B 1 HETATM 20 C C25 E5H . . . F 2 14.825 -12.855 -35.829 1 82.21 ? C25 E5H 601 B 1 HETATM 21 C C26 E5H . . . F 2 14.093 -11.657 -35.531 1 80.09 ? C26 E5H 601 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 21 #