data_6FSE # _model_server_result.job_id Awmhr-7vqgKELZE3qKhxKA _model_server_result.datetime_utc '2024-11-24 11:22:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fse # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":602}' # _entry.id 6FSE # _exptl.entry_id 6FSE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 437.574 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[4-(4-ethylpiperazin-1-yl)piperidin-1-yl]-2-[4-(4-methoxyphenyl)phenoxy]ethanone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FSE _cell.length_a 79.525 _cell.length_b 111.885 _cell.length_c 226.535 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FSE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 69 A CYS 69 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 257 A CYS 257 1_555 A SG CYS 272 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 409 A CYS 409 1_555 A SG CYS 529 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 69 B CYS 69 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 B SG CYS 257 B CYS 257 1_555 B SG CYS 272 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 409 B CYS 409 1_555 B SG CYS 529 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C26 H35 N3 O3' _chem_comp.formula_weight 437.574 _chem_comp.id E5K _chem_comp.mon_nstd_flag . _chem_comp.name 1-[4-(4-ethylpiperazin-1-yl)piperidin-1-yl]-2-[4-(4-methoxyphenyl)phenoxy]ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C20 E5K doub 123 n y C21 C22 E5K sing 124 n y C20 C19 E5K sing 125 n y C23 C22 E5K sing 126 n n O01 C02 E5K doub 127 n n C22 C31 E5K doub 128 n y C19 O18 E5K sing 129 n n C19 C32 E5K doub 130 n y O18 C17 E5K sing 131 n n C02 C17 E5K sing 132 n n C02 N03 E5K sing 133 n n C31 C32 E5K sing 134 n y C06 N03 E5K sing 135 n n C06 C07 E5K sing 136 n n N03 C04 E5K sing 137 n n C07 C08 E5K sing 138 n n C04 C05 E5K sing 139 n n C08 C05 E5K sing 140 n n C08 N09 E5K sing 141 n n C16 N09 E5K sing 142 n n C16 C15 E5K sing 143 n n N09 C10 E5K sing 144 n n C10 C11 E5K sing 145 n n C15 N12 E5K sing 146 n n N12 C11 E5K sing 147 n n N12 C13 E5K sing 148 n n C13 C14 E5K sing 149 n n C04 H1 E5K sing 150 n n C04 H2 E5K sing 151 n n C05 H3 E5K sing 152 n n C05 H4 E5K sing 153 n n C06 H5 E5K sing 154 n n C06 H6 E5K sing 155 n n C07 H7 E5K sing 156 n n C07 H8 E5K sing 157 n n C08 H9 E5K sing 158 n n C10 H11 E5K sing 159 n n C10 H12 E5K sing 160 n n C11 H13 E5K sing 161 n n C11 H14 E5K sing 162 n n C13 H16 E5K sing 163 n n C13 H17 E5K sing 164 n n C14 H18 E5K sing 165 n n C14 H19 E5K sing 166 n n C14 H20 E5K sing 167 n n C15 H21 E5K sing 168 n n C15 H22 E5K sing 169 n n C16 H23 E5K sing 170 n n C16 H24 E5K sing 171 n n C17 H25 E5K sing 172 n n C17 H26 E5K sing 173 n n C20 H27 E5K sing 174 n n C21 H28 E5K sing 175 n n C31 H32 E5K sing 176 n n C32 H33 E5K sing 177 n n C23 C1 E5K sing 178 n y C1 C2 E5K doub 179 n y C2 C3 E5K sing 180 n y C3 C4 E5K doub 181 n y C4 C5 E5K sing 182 n y C5 C23 E5K doub 183 n y C3 O1 E5K sing 184 n n O1 C7 E5K sing 185 n n C1 H10 E5K sing 186 n n C2 H15 E5K sing 187 n n C4 H29 E5K sing 188 n n C5 H30 E5K sing 189 n n C7 H31 E5K sing 190 n n C7 H34 E5K sing 191 n n C7 H35 E5K sing 192 n n # _atom_sites.entry_id 6FSE _atom_sites.fract_transf_matrix[1][1] 0.012575 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008938 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004414 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E5K A 1 601 1 E5K 284 . D 3 1PG A 1 602 1 1PG P5G . E 4 PEG A 1 603 1 PEG PEG . F 5 PG0 A 1 604 1 PG0 P2G . G 5 PG0 A 1 605 2 PG0 P2G . H 5 PG0 B 1 601 3 PG0 P2G . I 2 E5K B 1 602 2 E5K 284 . J 6 HOH A 1 701 44 HOH HOH . J 6 HOH A 2 702 302 HOH HOH . J 6 HOH A 3 703 138 HOH HOH . J 6 HOH A 4 704 164 HOH HOH . J 6 HOH A 5 705 36 HOH HOH . J 6 HOH A 6 706 17 HOH HOH . J 6 HOH A 7 707 79 HOH HOH . J 6 HOH A 8 708 258 HOH HOH . J 6 HOH A 9 709 1 HOH HOH . J 6 HOH A 10 710 293 HOH HOH . J 6 HOH A 11 711 295 HOH HOH . J 6 HOH A 12 712 64 HOH HOH . J 6 HOH A 13 713 71 HOH HOH . J 6 HOH A 14 714 14 HOH HOH . J 6 HOH A 15 716 281 HOH HOH . J 6 HOH A 16 717 68 HOH HOH . J 6 HOH A 17 718 22 HOH HOH . J 6 HOH A 18 719 8 HOH HOH . J 6 HOH A 19 720 87 HOH HOH . J 6 HOH A 20 721 3 HOH HOH . J 6 HOH A 21 722 29 HOH HOH . J 6 HOH A 22 723 78 HOH HOH . J 6 HOH A 23 724 277 HOH HOH . J 6 HOH A 24 725 110 HOH HOH . J 6 HOH A 25 726 213 HOH HOH . J 6 HOH A 26 727 15 HOH HOH . J 6 HOH A 27 728 97 HOH HOH . J 6 HOH A 28 729 61 HOH HOH . J 6 HOH A 29 730 247 HOH HOH . J 6 HOH A 30 731 298 HOH HOH . J 6 HOH A 31 732 296 HOH HOH . J 6 HOH A 32 733 102 HOH HOH . J 6 HOH A 33 734 92 HOH HOH . J 6 HOH A 34 735 82 HOH HOH . J 6 HOH A 35 736 6 HOH HOH . J 6 HOH A 36 737 5 HOH HOH . J 6 HOH A 37 738 91 HOH HOH . J 6 HOH A 38 739 19 HOH HOH . J 6 HOH A 39 740 238 HOH HOH . J 6 HOH A 40 741 282 HOH HOH . J 6 HOH A 41 742 289 HOH HOH . J 6 HOH A 42 743 67 HOH HOH . J 6 HOH A 43 744 58 HOH HOH . J 6 HOH A 44 745 127 HOH HOH . J 6 HOH A 45 746 162 HOH HOH . J 6 HOH A 46 747 184 HOH HOH . J 6 HOH A 47 748 51 HOH HOH . J 6 HOH A 48 749 69 HOH HOH . J 6 HOH A 49 750 186 HOH HOH . J 6 HOH A 50 751 311 HOH HOH . J 6 HOH A 51 752 265 HOH HOH . J 6 HOH A 52 753 161 HOH HOH . J 6 HOH A 53 754 48 HOH HOH . J 6 HOH A 54 755 45 HOH HOH . J 6 HOH A 55 756 246 HOH HOH . J 6 HOH A 56 757 2 HOH HOH . J 6 HOH A 57 758 72 HOH HOH . J 6 HOH A 58 759 74 HOH HOH . J 6 HOH A 59 760 41 HOH HOH . J 6 HOH A 60 761 4 HOH HOH . J 6 HOH A 61 762 209 HOH HOH . J 6 HOH A 62 763 146 HOH HOH . J 6 HOH A 63 764 104 HOH HOH . J 6 HOH A 64 765 60 HOH HOH . J 6 HOH A 65 766 96 HOH HOH . J 6 HOH A 66 767 125 HOH HOH . J 6 HOH A 67 768 183 HOH HOH . J 6 HOH A 68 769 253 HOH HOH . J 6 HOH A 69 770 100 HOH HOH . J 6 HOH A 70 771 292 HOH HOH . J 6 HOH A 71 772 153 HOH HOH . J 6 HOH A 72 773 10 HOH HOH . J 6 HOH A 73 774 235 HOH HOH . J 6 HOH A 74 775 40 HOH HOH . J 6 HOH A 75 776 88 HOH HOH . J 6 HOH A 76 777 103 HOH HOH . J 6 HOH A 77 778 251 HOH HOH . J 6 HOH A 78 779 210 HOH HOH . J 6 HOH A 79 780 49 HOH HOH . J 6 HOH A 80 781 73 HOH HOH . J 6 HOH A 81 782 159 HOH HOH . J 6 HOH A 82 783 163 HOH HOH . J 6 HOH A 83 784 108 HOH HOH . J 6 HOH A 84 785 274 HOH HOH . J 6 HOH A 85 786 199 HOH HOH . J 6 HOH A 86 787 257 HOH HOH . J 6 HOH A 87 788 121 HOH HOH . J 6 HOH A 88 789 54 HOH HOH . J 6 HOH A 89 790 280 HOH HOH . J 6 HOH A 90 791 221 HOH HOH . J 6 HOH A 91 792 151 HOH HOH . J 6 HOH A 92 793 155 HOH HOH . J 6 HOH A 93 794 248 HOH HOH . J 6 HOH A 94 795 191 HOH HOH . J 6 HOH A 95 796 156 HOH HOH . J 6 HOH A 96 797 144 HOH HOH . J 6 HOH A 97 798 166 HOH HOH . J 6 HOH A 98 799 119 HOH HOH . J 6 HOH A 99 800 222 HOH HOH . J 6 HOH A 100 801 266 HOH HOH . K 6 HOH B 1 701 224 HOH HOH . K 6 HOH B 2 702 42 HOH HOH . K 6 HOH B 3 703 147 HOH HOH . K 6 HOH B 4 704 37 HOH HOH . K 6 HOH B 5 705 93 HOH HOH . K 6 HOH B 6 706 84 HOH HOH . K 6 HOH B 7 707 66 HOH HOH . K 6 HOH B 8 708 279 HOH HOH . K 6 HOH B 9 709 196 HOH HOH . K 6 HOH B 10 710 306 HOH HOH . K 6 HOH B 11 711 173 HOH HOH . K 6 HOH B 12 712 43 HOH HOH . K 6 HOH B 13 713 205 HOH HOH . K 6 HOH B 14 714 290 HOH HOH . K 6 HOH B 15 715 55 HOH HOH . K 6 HOH B 16 716 187 HOH HOH . K 6 HOH B 17 717 310 HOH HOH . K 6 HOH B 18 718 172 HOH HOH . K 6 HOH B 19 719 175 HOH HOH . K 6 HOH B 20 720 23 HOH HOH . K 6 HOH B 21 721 179 HOH HOH . K 6 HOH B 22 722 230 HOH HOH . K 6 HOH B 23 723 309 HOH HOH . K 6 HOH B 24 724 50 HOH HOH . K 6 HOH B 25 725 286 HOH HOH . K 6 HOH B 26 726 11 HOH HOH . K 6 HOH B 27 727 165 HOH HOH . K 6 HOH B 28 728 284 HOH HOH . K 6 HOH B 29 729 167 HOH HOH . K 6 HOH B 30 730 145 HOH HOH . K 6 HOH B 31 731 129 HOH HOH . K 6 HOH B 32 732 112 HOH HOH . K 6 HOH B 33 733 176 HOH HOH . K 6 HOH B 34 734 312 HOH HOH . K 6 HOH B 35 735 16 HOH HOH . K 6 HOH B 36 736 301 HOH HOH . K 6 HOH B 37 737 111 HOH HOH . K 6 HOH B 38 738 25 HOH HOH . K 6 HOH B 39 739 85 HOH HOH . K 6 HOH B 40 740 185 HOH HOH . K 6 HOH B 41 741 115 HOH HOH . K 6 HOH B 42 742 300 HOH HOH . K 6 HOH B 43 743 38 HOH HOH . K 6 HOH B 44 744 47 HOH HOH . K 6 HOH B 45 745 65 HOH HOH . K 6 HOH B 46 746 268 HOH HOH . K 6 HOH B 47 747 303 HOH HOH . K 6 HOH B 48 748 122 HOH HOH . K 6 HOH B 49 749 34 HOH HOH . K 6 HOH B 50 750 299 HOH HOH . K 6 HOH B 51 751 140 HOH HOH . K 6 HOH B 52 752 70 HOH HOH . K 6 HOH B 53 753 287 HOH HOH . K 6 HOH B 54 754 142 HOH HOH . K 6 HOH B 55 755 174 HOH HOH . K 6 HOH B 56 756 291 HOH HOH . K 6 HOH B 57 757 21 HOH HOH . K 6 HOH B 58 758 228 HOH HOH . K 6 HOH B 59 759 206 HOH HOH . K 6 HOH B 60 760 124 HOH HOH . K 6 HOH B 61 761 278 HOH HOH . K 6 HOH B 62 762 276 HOH HOH . K 6 HOH B 63 763 275 HOH HOH . K 6 HOH B 64 764 304 HOH HOH . K 6 HOH B 65 765 239 HOH HOH . K 6 HOH B 66 766 241 HOH HOH . K 6 HOH B 67 767 192 HOH HOH . K 6 HOH B 68 768 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 E5K . . . I 2 12.059 -6.97 -34.715 0.7 67.55 ? O01 E5K 602 B 1 HETATM 2 C C02 E5K . . . I 2 11.216 -7.713 -35.223 0.7 64.77 ? C02 E5K 602 B 1 HETATM 3 N N03 E5K . . . I 2 9.83 -7.289 -35.127 0.7 63.46 ? N03 E5K 602 B 1 HETATM 4 C C04 E5K . . . I 2 9.382 -6.02 -34.421 0.7 62.89 ? C04 E5K 602 B 1 HETATM 5 C C05 E5K . . . I 2 8.247 -5.21 -35.065 0.7 64.02 ? C05 E5K 602 B 1 HETATM 6 C C06 E5K . . . I 2 8.678 -8.044 -35.648 0.7 60.07 ? C06 E5K 602 B 1 HETATM 7 C C07 E5K . . . I 2 7.582 -7.212 -36.356 0.7 60.09 ? C07 E5K 602 B 1 HETATM 8 C C08 E5K . . . I 2 7.072 -6.086 -35.47 0.7 68.46 ? C08 E5K 602 B 1 HETATM 9 N N09 E5K . . . I 2 6.119 -5.143 -36.181 0.7 67.12 ? N09 E5K 602 B 1 HETATM 10 C C10 E5K . . . I 2 6.775 -4.474 -37.318 0.7 53.2 ? C10 E5K 602 B 1 HETATM 11 C C11 E5K . . . I 2 5.697 -3.79 -38.213 0.7 53.07 ? C11 E5K 602 B 1 HETATM 12 N N12 E5K . . . I 2 4.839 -2.795 -37.479 0.7 55.74 ? N12 E5K 602 B 1 HETATM 13 C C13 E5K . . . I 2 5.553 -1.499 -37.467 0.7 45.73 ? C13 E5K 602 B 1 HETATM 14 C C14 E5K . . . I 2 4.986 -0.673 -38.6 0.7 45.27 ? C14 E5K 602 B 1 HETATM 15 C C15 E5K . . . I 2 4.55 -3.287 -35.768 0.7 52.39 ? C15 E5K 602 B 1 HETATM 16 C C16 E5K . . . I 2 5.676 -4.132 -35.183 0.7 61.29 ? C16 E5K 602 B 1 HETATM 17 C C17 E5K . . . I 2 11.743 -9.021 -35.91 0.7 63.07 ? C17 E5K 602 B 1 HETATM 18 O O18 E5K . . . I 2 12.764 -9.788 -35.201 0.7 65.7 ? O18 E5K 602 B 1 HETATM 19 C C19 E5K . . . I 2 13.257 -10.996 -35.752 0.7 69.31 ? C19 E5K 602 B 1 HETATM 20 C C20 E5K . . . I 2 12.719 -11.565 -36.924 0.7 67.56 ? C20 E5K 602 B 1 HETATM 21 C C21 E5K . . . I 2 13.211 -12.777 -37.48 0.7 70.06 ? C21 E5K 602 B 1 HETATM 22 C C22 E5K . . . I 2 14.271 -13.554 -36.955 0.7 68.91 ? C22 E5K 602 B 1 HETATM 23 C C23 E5K . . . I 2 14.782 -14.896 -37.612 0.7 62.64 ? C23 E5K 602 B 1 HETATM 24 C C31 E5K . . . I 2 14.787 -12.954 -35.78 0.7 70.22 ? C31 E5K 602 B 1 HETATM 25 C C32 E5K . . . I 2 14.315 -11.743 -35.199 0.7 65.98 ? C32 E5K 602 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 367 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 25 #