data_6FSJ # _model_server_result.job_id Bpv4mEffGFz7Xq5qHUgw8A _model_server_result.datetime_utc '2024-11-24 03:57:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fsj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6FSJ # _exptl.entry_id 6FSJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FSJ _cell.length_a 78.462 _cell.length_b 78.462 _cell.length_c 37.503 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FSJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 103 n n C1 C2 EDO sing 104 n n C1 H11 EDO sing 105 n n C1 H12 EDO sing 106 n n O1 HO1 EDO sing 107 n n C2 O2 EDO sing 108 n n C2 H21 EDO sing 109 n n C2 H22 EDO sing 110 n n O2 HO2 EDO sing 111 n n # _atom_sites.entry_id 6FSJ _atom_sites.fract_transf_matrix[1][1] 0.012745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012745 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026665 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 1 EDO EDO . C 2 EDO A 1 202 2 EDO EDO . D 2 EDO A 1 203 3 EDO EDO . E 3 CIT A 1 204 1 CIT CIT . F 4 HOH A 1 301 27 HOH HOH . F 4 HOH A 2 302 77 HOH HOH . F 4 HOH A 3 303 33 HOH HOH . F 4 HOH A 4 304 39 HOH HOH . F 4 HOH A 5 305 92 HOH HOH . F 4 HOH A 6 306 146 HOH HOH . F 4 HOH A 7 307 103 HOH HOH . F 4 HOH A 8 308 53 HOH HOH . F 4 HOH A 9 309 67 HOH HOH . F 4 HOH A 10 310 84 HOH HOH . F 4 HOH A 11 311 66 HOH HOH . F 4 HOH A 12 312 16 HOH HOH . F 4 HOH A 13 313 142 HOH HOH . F 4 HOH A 14 314 35 HOH HOH . F 4 HOH A 15 315 8 HOH HOH . F 4 HOH A 16 316 15 HOH HOH . F 4 HOH A 17 317 144 HOH HOH . F 4 HOH A 18 318 131 HOH HOH . F 4 HOH A 19 319 37 HOH HOH . F 4 HOH A 20 320 90 HOH HOH . F 4 HOH A 21 321 44 HOH HOH . F 4 HOH A 22 322 2 HOH HOH . F 4 HOH A 23 323 94 HOH HOH . F 4 HOH A 24 324 17 HOH HOH . F 4 HOH A 25 325 47 HOH HOH . F 4 HOH A 26 326 21 HOH HOH . F 4 HOH A 27 327 1 HOH HOH . F 4 HOH A 28 328 13 HOH HOH . F 4 HOH A 29 329 26 HOH HOH . F 4 HOH A 30 330 54 HOH HOH . F 4 HOH A 31 331 45 HOH HOH . F 4 HOH A 32 332 14 HOH HOH . F 4 HOH A 33 333 104 HOH HOH . F 4 HOH A 34 334 3 HOH HOH . F 4 HOH A 35 335 120 HOH HOH . F 4 HOH A 36 336 31 HOH HOH . F 4 HOH A 37 337 23 HOH HOH . F 4 HOH A 38 338 12 HOH HOH . F 4 HOH A 39 339 51 HOH HOH . F 4 HOH A 40 340 48 HOH HOH . F 4 HOH A 41 341 10 HOH HOH . F 4 HOH A 42 342 20 HOH HOH . F 4 HOH A 43 343 128 HOH HOH . F 4 HOH A 44 344 38 HOH HOH . F 4 HOH A 45 345 68 HOH HOH . F 4 HOH A 46 346 32 HOH HOH . F 4 HOH A 47 347 55 HOH HOH . F 4 HOH A 48 348 130 HOH HOH . F 4 HOH A 49 349 96 HOH HOH . F 4 HOH A 50 350 36 HOH HOH . F 4 HOH A 51 351 28 HOH HOH . F 4 HOH A 52 352 18 HOH HOH . F 4 HOH A 53 353 6 HOH HOH . F 4 HOH A 54 354 59 HOH HOH . F 4 HOH A 55 355 49 HOH HOH . F 4 HOH A 56 356 87 HOH HOH . F 4 HOH A 57 357 34 HOH HOH . F 4 HOH A 58 358 7 HOH HOH . F 4 HOH A 59 359 56 HOH HOH . F 4 HOH A 60 360 4 HOH HOH . F 4 HOH A 61 361 9 HOH HOH . F 4 HOH A 62 362 5 HOH HOH . F 4 HOH A 63 363 98 HOH HOH . F 4 HOH A 64 364 95 HOH HOH . F 4 HOH A 65 365 115 HOH HOH . F 4 HOH A 66 366 29 HOH HOH . F 4 HOH A 67 367 41 HOH HOH . F 4 HOH A 68 368 22 HOH HOH . F 4 HOH A 69 369 108 HOH HOH . F 4 HOH A 70 370 25 HOH HOH . F 4 HOH A 71 371 52 HOH HOH . F 4 HOH A 72 372 43 HOH HOH . F 4 HOH A 73 373 75 HOH HOH . F 4 HOH A 74 374 24 HOH HOH . F 4 HOH A 75 375 93 HOH HOH . F 4 HOH A 76 376 42 HOH HOH . F 4 HOH A 77 377 145 HOH HOH . F 4 HOH A 78 378 61 HOH HOH . F 4 HOH A 79 379 30 HOH HOH . F 4 HOH A 80 380 57 HOH HOH . F 4 HOH A 81 381 89 HOH HOH . F 4 HOH A 82 382 72 HOH HOH . F 4 HOH A 83 383 60 HOH HOH . F 4 HOH A 84 384 74 HOH HOH . F 4 HOH A 85 385 97 HOH HOH . F 4 HOH A 86 386 136 HOH HOH . F 4 HOH A 87 387 62 HOH HOH . F 4 HOH A 88 388 140 HOH HOH . F 4 HOH A 89 389 133 HOH HOH . F 4 HOH A 90 390 40 HOH HOH . F 4 HOH A 91 391 79 HOH HOH . F 4 HOH A 92 392 138 HOH HOH . F 4 HOH A 93 393 85 HOH HOH . F 4 HOH A 94 394 111 HOH HOH . F 4 HOH A 95 395 107 HOH HOH . F 4 HOH A 96 396 134 HOH HOH . F 4 HOH A 97 397 76 HOH HOH . F 4 HOH A 98 398 78 HOH HOH . F 4 HOH A 99 399 112 HOH HOH . F 4 HOH A 100 400 80 HOH HOH . F 4 HOH A 101 401 71 HOH HOH . F 4 HOH A 102 402 65 HOH HOH . F 4 HOH A 103 403 73 HOH HOH . F 4 HOH A 104 404 70 HOH HOH . F 4 HOH A 105 405 58 HOH HOH . F 4 HOH A 106 406 91 HOH HOH . F 4 HOH A 107 407 69 HOH HOH . F 4 HOH A 108 408 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -11.88 12.263 9.786 0.42 34.01 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . C 2 -10.456 12.172 9.813 0.42 30.49 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . C 2 -12.419 11.553 8.55 0.42 31.69 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . C 2 -11.736 10.309 8.363 0.42 45.87 ? O2 EDO 202 A 1 HETATM 5 H H11 EDO . . . C 2 -12.296 11.804 10.686 0.42 40.82 ? H11 EDO 202 A 1 HETATM 6 H H12 EDO . . . C 2 -12.181 13.313 9.769 0.42 40.82 ? H12 EDO 202 A 1 HETATM 7 H HO1 EDO . . . C 2 -10.119 12.623 10.598 0.42 36.58 ? HO1 EDO 202 A 1 HETATM 8 H H21 EDO . . . C 2 -13.489 11.371 8.668 0.42 38.03 ? H21 EDO 202 A 1 HETATM 9 H H22 EDO . . . C 2 -12.277 12.186 7.672 0.42 38.03 ? H22 EDO 202 A 1 HETATM 10 H HO2 EDO . . . C 2 -12.084 9.865 7.578 0.42 55.05 ? HO2 EDO 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #