data_6FUU # _model_server_result.job_id PeHI14V0UNam03geT1KUjQ _model_server_result.datetime_utc '2025-07-31 06:23:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fuu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6FUU # _exptl.entry_id 6FUU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FUU _cell.length_a 35.145 _cell.length_b 35.145 _cell.length_c 180.668 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FUU _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+3/2 0 -1 0 -1 0 0 0 0 -1 35.145 35.145 271.002 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 116 n n CHA C4D HEM doub 117 n n CHA HHA HEM sing 118 n n CHB C4A HEM sing 119 n n CHB C1B HEM doub 120 n n CHB HHB HEM sing 121 n n CHC C4B HEM sing 122 n n CHC C1C HEM doub 123 n n CHC HHC HEM sing 124 n n CHD C4C HEM doub 125 n n CHD C1D HEM sing 126 n n CHD HHD HEM sing 127 n n C1A C2A HEM doub 128 n y C1A NA HEM sing 129 n y C2A C3A HEM sing 130 n y C2A CAA HEM sing 131 n n C3A C4A HEM doub 132 n y C3A CMA HEM sing 133 n n C4A NA HEM sing 134 n y CMA HMA HEM sing 135 n n CMA HMAA HEM sing 136 n n CMA HMAB HEM sing 137 n n CAA CBA HEM sing 138 n n CAA HAA HEM sing 139 n n CAA HAAA HEM sing 140 n n CBA CGA HEM sing 141 n n CBA HBA HEM sing 142 n n CBA HBAA HEM sing 143 n n CGA O1A HEM doub 144 n n CGA O2A HEM sing 145 n n C1B C2B HEM sing 146 n n C1B NB HEM sing 147 n n C2B C3B HEM doub 148 n n C2B CMB HEM sing 149 n n C3B C4B HEM sing 150 n n C3B CAB HEM sing 151 n n C4B NB HEM doub 152 n n CMB HMB HEM sing 153 n n CMB HMBA HEM sing 154 n n CMB HMBB HEM sing 155 n n CAB CBB HEM doub 156 n n CAB HAB HEM sing 157 n n CBB HBB HEM sing 158 n n CBB HBBA HEM sing 159 n n C1C C2C HEM sing 160 n y C1C NC HEM sing 161 n y C2C C3C HEM doub 162 n y C2C CMC HEM sing 163 n n C3C C4C HEM sing 164 n y C3C CAC HEM sing 165 n n C4C NC HEM sing 166 n y CMC HMC HEM sing 167 n n CMC HMCA HEM sing 168 n n CMC HMCB HEM sing 169 n n CAC CBC HEM doub 170 n n CAC HAC HEM sing 171 n n CBC HBC HEM sing 172 n n CBC HBCA HEM sing 173 n n C1D C2D HEM sing 174 n n C1D ND HEM doub 175 n n C2D C3D HEM doub 176 n n C2D CMD HEM sing 177 n n C3D C4D HEM sing 178 n n C3D CAD HEM sing 179 n n C4D ND HEM sing 180 n n CMD HMD HEM sing 181 n n CMD HMDA HEM sing 182 n n CMD HMDB HEM sing 183 n n CAD CBD HEM sing 184 n n CAD HAD HEM sing 185 n n CAD HADA HEM sing 186 n n CBD CGD HEM sing 187 n n CBD HBD HEM sing 188 n n CBD HBDA HEM sing 189 n n CGD O1D HEM doub 190 n n CGD O2D HEM sing 191 n n O2A H2A HEM sing 192 n n O2D H2D HEM sing 193 n n FE NA HEM sing 194 n n FE NB HEM sing 195 n n FE NC HEM sing 196 n n FE ND HEM sing 197 n n # _atom_sites.entry_id 6FUU _atom_sites.fract_transf_matrix[1][1] 0.028454 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 1 HEM HEM . C 3 HOH A 1 301 24 HOH HOH . C 3 HOH A 2 302 10 HOH HOH . C 3 HOH A 3 303 42 HOH HOH . C 3 HOH A 4 304 48 HOH HOH . C 3 HOH A 5 305 58 HOH HOH . C 3 HOH A 6 306 12 HOH HOH . C 3 HOH A 7 307 43 HOH HOH . C 3 HOH A 8 308 26 HOH HOH . C 3 HOH A 9 309 11 HOH HOH . C 3 HOH A 10 310 9 HOH HOH . C 3 HOH A 11 311 27 HOH HOH . C 3 HOH A 12 312 31 HOH HOH . C 3 HOH A 13 313 45 HOH HOH . C 3 HOH A 14 314 1 HOH HOH . C 3 HOH A 15 315 2 HOH HOH . C 3 HOH A 16 316 5 HOH HOH . C 3 HOH A 17 317 35 HOH HOH . C 3 HOH A 18 318 14 HOH HOH . C 3 HOH A 19 319 15 HOH HOH . C 3 HOH A 20 320 22 HOH HOH . C 3 HOH A 21 321 40 HOH HOH . C 3 HOH A 22 322 17 HOH HOH . C 3 HOH A 23 323 39 HOH HOH . C 3 HOH A 24 324 36 HOH HOH . C 3 HOH A 25 325 4 HOH HOH . C 3 HOH A 26 326 6 HOH HOH . C 3 HOH A 27 327 32 HOH HOH . C 3 HOH A 28 328 20 HOH HOH . C 3 HOH A 29 329 7 HOH HOH . C 3 HOH A 30 330 46 HOH HOH . C 3 HOH A 31 331 19 HOH HOH . C 3 HOH A 32 332 13 HOH HOH . C 3 HOH A 33 333 34 HOH HOH . C 3 HOH A 34 334 33 HOH HOH . C 3 HOH A 35 335 16 HOH HOH . C 3 HOH A 36 336 54 HOH HOH . C 3 HOH A 37 337 25 HOH HOH . C 3 HOH A 38 338 57 HOH HOH . C 3 HOH A 39 339 3 HOH HOH . C 3 HOH A 40 340 23 HOH HOH . C 3 HOH A 41 341 21 HOH HOH . C 3 HOH A 42 342 28 HOH HOH . C 3 HOH A 43 343 30 HOH HOH . C 3 HOH A 44 344 38 HOH HOH . C 3 HOH A 45 345 29 HOH HOH . C 3 HOH A 46 346 56 HOH HOH . C 3 HOH A 47 347 41 HOH HOH . C 3 HOH A 48 348 49 HOH HOH . C 3 HOH A 49 349 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . A . B 2 16.455 16.297 136.32 0.25 54.24 ? CHA HEM 201 A 1 HETATM 2 C CHA HEM . B . B 2 16.791 13.053 138.121 0.25 53.33 ? CHA HEM 201 A 1 HETATM 3 C CHB HEM . A . B 2 20.294 17.885 133.835 0.25 54.03 ? CHB HEM 201 A 1 HETATM 4 C CHB HEM . B . B 2 16.397 17.6 136.466 0.25 54.29 ? CHB HEM 201 A 1 HETATM 5 C CHC HEM . A . B 2 22.699 13.799 134.989 0.25 53.88 ? CHC HEM 201 A 1 HETATM 6 C CHC HEM . B . B 2 20.521 16.979 133.914 0.25 54.08 ? CHC HEM 201 A 1 HETATM 7 C CHD HEM . A . B 2 19.04 12.491 137.884 0.25 53.65 ? CHD HEM 201 A 1 HETATM 8 C CHD HEM . B . B 2 21.259 12.789 136.224 0.25 53.88 ? CHD HEM 201 A 1 HETATM 9 C C1A HEM . A . B 2 17.307 17.057 135.557 0.25 54.44 ? C1A HEM 201 A 1 HETATM 10 C C1A HEM . B . B 2 16.351 14.332 137.869 0.25 54 ? C1A HEM 201 A 1 HETATM 11 C C2A HEM . A . B 2 16.965 18.323 135.026 0.25 54.35 ? C2A HEM 201 A 1 HETATM 12 C C2A HEM . B . B 2 15.153 14.869 138.386 0.25 53.86 ? C2A HEM 201 A 1 HETATM 13 C C3A HEM . A . B 2 18.043 18.765 134.318 0.25 54.29 ? C3A HEM 201 A 1 HETATM 14 C C3A HEM . B . B 2 15.036 16.14 137.92 0.25 54.08 ? C3A HEM 201 A 1 HETATM 15 C C4A HEM . A . B 2 19.052 17.786 134.423 0.25 54.31 ? C4A HEM 201 A 1 HETATM 16 C C4A HEM . B . B 2 16.163 16.406 137.118 0.25 54.17 ? C4A HEM 201 A 1 HETATM 17 C CMA HEM . A . B 2 18.185 20.062 133.561 0.25 54.04 ? CMA HEM 201 A 1 HETATM 18 C CMA HEM . B . B 2 13.917 17.106 138.209 0.25 53.74 ? CMA HEM 201 A 1 HETATM 19 C CAA HEM . A . B 2 15.63 19.012 135.208 0.25 54.12 ? CAA HEM 201 A 1 HETATM 20 C CAA HEM . B . B 2 14.173 14.154 139.282 0.25 53.47 ? CAA HEM 201 A 1 HETATM 21 C CBA HEM . A . B 2 15.727 20.318 136 0.25 53.56 ? CBA HEM 201 A 1 HETATM 22 C CBA HEM . B . B 2 14.353 14.558 140.747 0.25 53.14 ? CBA HEM 201 A 1 HETATM 23 C CGA HEM . A . B 2 15.488 21.486 135.078 0.25 53.77 ? CGA HEM 201 A 1 HETATM 24 C CGA HEM . B . B 2 13.054 15.128 141.254 0.25 53.24 ? CGA HEM 201 A 1 HETATM 25 O O1A HEM . A . B 2 15.205 21.289 133.875 0.25 53.86 ? O1A HEM 201 A 1 HETATM 26 O O1A HEM . B . B 2 12.213 14.382 141.804 0.25 52.38 ? O1A HEM 201 A 1 HETATM 27 O O2A HEM . A . B 2 15.572 22.654 135.516 0.25 53.94 ? O2A HEM 201 A 1 HETATM 28 O O2A HEM . B . B 2 12.808 16.348 141.116 0.25 54.17 ? O2A HEM 201 A 1 HETATM 29 C C1B HEM . A . B 2 21.245 16.867 133.935 0.25 53.93 ? C1B HEM 201 A 1 HETATM 30 C C1B HEM . B . B 2 17.485 17.771 135.6 0.25 54.48 ? C1B HEM 201 A 1 HETATM 31 C C2B HEM . A . B 2 22.482 16.944 133.243 0.25 53.68 ? C2B HEM 201 A 1 HETATM 32 C C2B HEM . B . B 2 17.639 18.943 134.807 0.25 54.27 ? C2B HEM 201 A 1 HETATM 33 C C3B HEM . A . B 2 23.183 15.815 133.541 0.25 53.73 ? C3B HEM 201 A 1 HETATM 34 C C3B HEM . B . B 2 18.783 18.791 134.084 0.25 54.22 ? C3B HEM 201 A 1 HETATM 35 C C4B HEM . A . B 2 22.317 15.032 134.458 0.25 53.79 ? C4B HEM 201 A 1 HETATM 36 C C4B HEM . B . B 2 19.335 17.472 134.465 0.25 54.34 ? C4B HEM 201 A 1 HETATM 37 C CMB HEM . A . B 2 22.937 18.066 132.347 0.25 52.85 ? CMB HEM 201 A 1 HETATM 38 C CMB HEM . B . B 2 16.713 20.132 134.769 0.25 53.83 ? CMB HEM 201 A 1 HETATM 39 C CAB HEM . A . B 2 24.531 15.467 133.046 0.25 53.42 ? CAB HEM 201 A 1 HETATM 40 C CAB HEM . B . B 2 19.37 19.739 133.118 0.25 54.02 ? CAB HEM 201 A 1 HETATM 41 C CBB HEM . A . B 2 24.799 14.27 132.535 0.25 53.68 ? CBB HEM 201 A 1 HETATM 42 C CBB HEM . B . B 2 19.12 19.608 131.819 0.25 53.81 ? CBB HEM 201 A 1 HETATM 43 C C1C HEM . A . B 2 21.937 13.104 135.913 0.25 53.9 ? C1C HEM 201 A 1 HETATM 44 C C1C HEM . B . B 2 21.114 15.806 134.354 0.25 54.01 ? C1C HEM 201 A 1 HETATM 45 C C2C HEM . A . B 2 22.334 11.932 136.568 0.25 54.11 ? C2C HEM 201 A 1 HETATM 46 C C2C HEM . B . B 2 22.375 15.333 133.962 0.25 53.74 ? C2C HEM 201 A 1 HETATM 47 C C3C HEM . A . B 2 21.294 11.549 137.4 0.25 53.79 ? C3C HEM 201 A 1 HETATM 48 C C3C HEM . B . B 2 22.583 14.135 134.624 0.25 53.84 ? C3C HEM 201 A 1 HETATM 49 C C4C HEM . A . B 2 20.254 12.512 137.241 0.25 53.79 ? C4C HEM 201 A 1 HETATM 50 C C4C HEM . B . B 2 21.436 13.887 135.425 0.25 53.72 ? C4C HEM 201 A 1 HETATM 51 C CMC HEM . A . B 2 23.657 11.228 136.392 0.25 53.92 ? CMC HEM 201 A 1 HETATM 52 C CMC HEM . B . B 2 23.326 16.009 133.003 0.25 53.45 ? CMC HEM 201 A 1 HETATM 53 C CAC HEM . A . B 2 21.297 10.36 138.278 0.25 53.77 ? CAC HEM 201 A 1 HETATM 54 C CAC HEM . B . B 2 23.777 13.277 134.528 0.25 54 ? CAC HEM 201 A 1 HETATM 55 C CBC HEM . A . B 2 20.976 10.443 139.567 0.25 53.56 ? CBC HEM 201 A 1 HETATM 56 C CBC HEM . B . B 2 23.877 12.413 133.524 0.25 54.08 ? CBC HEM 201 A 1 HETATM 57 C C1D HEM . A . B 2 18.042 13.439 137.638 0.25 53.75 ? C1D HEM 201 A 1 HETATM 58 C C1D HEM . B . B 2 20.056 12.539 136.887 0.25 53.79 ? C1D HEM 201 A 1 HETATM 59 C C2D HEM . A . B 2 16.718 13.32 138.263 0.25 53.38 ? C2D HEM 201 A 1 HETATM 60 C C2D HEM . B . B 2 19.838 11.268 137.581 0.25 53.65 ? C2D HEM 201 A 1 HETATM 61 C C3D HEM . A . B 2 16 14.375 137.837 0.25 54.01 ? C3D HEM 201 A 1 HETATM 62 C C3D HEM . B . B 2 18.608 11.329 138.117 0.25 53.25 ? C3D HEM 201 A 1 HETATM 63 C C4D HEM . A . B 2 16.886 15.135 136.943 0.25 54.14 ? C4D HEM 201 A 1 HETATM 64 C C4D HEM . B . B 2 18.062 12.644 137.739 0.25 53.67 ? C4D HEM 201 A 1 HETATM 65 C CMD HEM . A . B 2 16.261 12.231 139.199 0.25 52.59 ? CMD HEM 201 A 1 HETATM 66 C CMD HEM . B . B 2 20.812 10.123 137.678 0.25 53.67 ? CMD HEM 201 A 1 HETATM 67 C CAD HEM . A . B 2 14.567 14.701 138.192 0.25 53.83 ? CAD HEM 201 A 1 HETATM 68 C CAD HEM . B . B 2 17.944 10.227 138.909 0.25 51.38 ? CAD HEM 201 A 1 HETATM 69 C CBD HEM . A . B 2 14.474 15.962 139.057 0.25 53.72 ? CBD HEM 201 A 1 HETATM 70 C CBD HEM . B . B 2 17.626 10.609 140.354 0.25 44.7 ? CBD HEM 201 A 1 HETATM 71 C CGD HEM . A . B 2 13.037 16.229 139.432 0.25 54 ? CGD HEM 201 A 1 HETATM 72 C CGD HEM . B . B 2 17.163 9.37 141.079 0.25 36.68 ? CGD HEM 201 A 1 HETATM 73 O O1D HEM . A . B 2 12.765 17.149 140.235 0.25 54.64 ? O1D HEM 201 A 1 HETATM 74 O O1D HEM . B . B 2 15.946 9.074 141.101 0.25 31.42 ? O1D HEM 201 A 1 HETATM 75 O O2D HEM . A . B 2 12.114 15.536 138.945 0.25 54.8 ? O2D HEM 201 A 1 HETATM 76 O O2D HEM . B . B 2 18.001 8.632 141.648 0.25 32.39 ? O2D HEM 201 A 1 HETATM 77 N NA HEM . A . B 2 18.589 16.734 135.171 0.25 54.51 ? NA HEM 201 A 1 HETATM 78 N NA HEM . B . B 2 16.955 15.286 137.08 0.25 54.15 ? NA HEM 201 A 1 HETATM 79 N NB HEM . A . B 2 21.18 15.73 134.645 0.25 54.09 ? NB HEM 201 A 1 HETATM 80 N NB HEM . B . B 2 18.504 16.924 135.376 0.25 54.5 ? NB HEM 201 A 1 HETATM 81 N NC HEM . A . B 2 20.671 13.429 136.31 0.25 53.88 ? NC HEM 201 A 1 HETATM 82 N NC HEM . B . B 2 20.549 14.907 135.219 0.25 54.18 ? NC HEM 201 A 1 HETATM 83 N ND HEM . A . B 2 18.089 14.537 136.861 0.25 54.06 ? ND HEM 201 A 1 HETATM 84 N ND HEM . B . B 2 18.97 13.323 137.01 0.25 53.77 ? ND HEM 201 A 1 HETATM 85 FE FE HEM . A . B 2 19.552 15.13 135.849 0.25 54.89 ? FE HEM 201 A 1 HETATM 86 FE FE HEM . B . B 2 18.761 15.039 136.292 0.25 55.03 ? FE HEM 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 86 #