data_6FV5
#
_model_server_result.job_id            qBLpI7CzoXhp37JJqppcOg 
_model_server_result.datetime_utc      '2024-11-29 12:30:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fv5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    6FV5 
#
_exptl.entry_id    6FV5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6FV5 
_cell.length_a            118.475 
_cell.length_b            124.573 
_cell.length_c            61.849 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FV5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 357 A CYS 351 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc2 A SG CYS 359 A CYS 353 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc3 A SG CYS 362 A CYS 356 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? 
metalc ? metalc4 A ND1 HIS 388 A HIS 382 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc5 B SG CYS 357 B CYS 351 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc6 B SG CYS 359 B CYS 353 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc7 B SG CYS 362 B CYS 356 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc8 B ND1 HIS 388 B HIS 382 1_555 F ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 245 n n 
C1 C2 PEG sing 246 n n 
C1 H11 PEG sing 247 n n 
C1 H12 PEG sing 248 n n 
O1 HO1 PEG sing 249 n n 
C2 O2 PEG sing 250 n n 
C2 H21 PEG sing 251 n n 
C2 H22 PEG sing 252 n n 
O2 C3 PEG sing 253 n n 
C3 C4 PEG sing 254 n n 
C3 H31 PEG sing 255 n n 
C3 H32 PEG sing 256 n n 
C4 O4 PEG sing 257 n n 
C4 H41 PEG sing 258 n n 
C4 H42 PEG sing 259 n n 
O4 HO4 PEG sing 260 n n 
#
_atom_sites.entry_id                     6FV5 
_atom_sites.fract_transf_matrix[1][1]    0.008441 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008027 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016168 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 501 2 ZN ZN . 
D 3 PEG A 1 502 2 PEG PEG . 
E 4 MLI A 1 503 1 MLI MLI . 
F 2 ZN B 1 501 1 ZN ZN . 
G 5 HOH A 1 601 235 HOH HOH . 
G 5 HOH A 2 602 14 HOH HOH . 
G 5 HOH A 3 603 171 HOH HOH . 
G 5 HOH A 4 604 30 HOH HOH . 
G 5 HOH A 5 605 52 HOH HOH . 
G 5 HOH A 6 606 222 HOH HOH . 
G 5 HOH A 7 607 200 HOH HOH . 
G 5 HOH A 8 608 9 HOH HOH . 
G 5 HOH A 9 609 208 HOH HOH . 
G 5 HOH A 10 610 218 HOH HOH . 
G 5 HOH A 11 611 196 HOH HOH . 
G 5 HOH A 12 612 53 HOH HOH . 
G 5 HOH A 13 613 128 HOH HOH . 
G 5 HOH A 14 614 47 HOH HOH . 
G 5 HOH A 15 615 12 HOH HOH . 
G 5 HOH A 16 616 195 HOH HOH . 
G 5 HOH A 17 617 93 HOH HOH . 
G 5 HOH A 18 618 175 HOH HOH . 
G 5 HOH A 19 619 90 HOH HOH . 
G 5 HOH A 20 620 41 HOH HOH . 
G 5 HOH A 21 621 13 HOH HOH . 
G 5 HOH A 22 622 38 HOH HOH . 
G 5 HOH A 23 623 49 HOH HOH . 
G 5 HOH A 24 624 2 HOH HOH . 
G 5 HOH A 25 625 34 HOH HOH . 
G 5 HOH A 26 626 217 HOH HOH . 
G 5 HOH A 27 627 20 HOH HOH . 
G 5 HOH A 28 628 28 HOH HOH . 
G 5 HOH A 29 629 156 HOH HOH . 
G 5 HOH A 30 630 163 HOH HOH . 
G 5 HOH A 31 631 131 HOH HOH . 
G 5 HOH A 32 632 25 HOH HOH . 
G 5 HOH A 33 633 135 HOH HOH . 
G 5 HOH A 34 634 240 HOH HOH . 
G 5 HOH A 35 635 237 HOH HOH . 
G 5 HOH A 36 636 16 HOH HOH . 
G 5 HOH A 37 637 35 HOH HOH . 
G 5 HOH A 38 638 29 HOH HOH . 
G 5 HOH A 39 639 44 HOH HOH . 
G 5 HOH A 40 640 130 HOH HOH . 
G 5 HOH A 41 641 45 HOH HOH . 
G 5 HOH A 42 642 42 HOH HOH . 
G 5 HOH A 43 643 43 HOH HOH . 
G 5 HOH A 44 644 126 HOH HOH . 
G 5 HOH A 45 645 36 HOH HOH . 
G 5 HOH A 46 646 219 HOH HOH . 
G 5 HOH A 47 647 129 HOH HOH . 
G 5 HOH A 48 648 190 HOH HOH . 
G 5 HOH A 49 649 122 HOH HOH . 
G 5 HOH A 50 650 60 HOH HOH . 
G 5 HOH A 51 651 205 HOH HOH . 
G 5 HOH A 52 652 233 HOH HOH . 
G 5 HOH A 53 653 26 HOH HOH . 
G 5 HOH A 54 654 37 HOH HOH . 
G 5 HOH A 55 655 89 HOH HOH . 
G 5 HOH A 56 656 24 HOH HOH . 
G 5 HOH A 57 657 48 HOH HOH . 
G 5 HOH A 58 658 204 HOH HOH . 
G 5 HOH A 59 659 214 HOH HOH . 
G 5 HOH A 60 660 15 HOH HOH . 
G 5 HOH A 61 661 177 HOH HOH . 
G 5 HOH A 62 662 241 HOH HOH . 
G 5 HOH A 63 663 221 HOH HOH . 
G 5 HOH A 64 664 6 HOH HOH . 
G 5 HOH A 65 665 78 HOH HOH . 
G 5 HOH A 66 666 123 HOH HOH . 
G 5 HOH A 67 667 27 HOH HOH . 
G 5 HOH A 68 668 124 HOH HOH . 
G 5 HOH A 69 669 211 HOH HOH . 
G 5 HOH A 70 670 39 HOH HOH . 
G 5 HOH A 71 671 4 HOH HOH . 
G 5 HOH A 72 672 46 HOH HOH . 
G 5 HOH A 73 673 31 HOH HOH . 
G 5 HOH A 74 674 8 HOH HOH . 
G 5 HOH A 75 675 7 HOH HOH . 
G 5 HOH A 76 676 173 HOH HOH . 
G 5 HOH A 77 677 19 HOH HOH . 
G 5 HOH A 78 678 216 HOH HOH . 
G 5 HOH A 79 679 1 HOH HOH . 
G 5 HOH A 80 680 187 HOH HOH . 
G 5 HOH A 81 681 238 HOH HOH . 
G 5 HOH A 82 682 212 HOH HOH . 
G 5 HOH A 83 683 178 HOH HOH . 
G 5 HOH A 84 684 55 HOH HOH . 
G 5 HOH A 85 685 239 HOH HOH . 
G 5 HOH A 86 686 220 HOH HOH . 
G 5 HOH A 87 687 3 HOH HOH . 
G 5 HOH A 88 688 206 HOH HOH . 
G 5 HOH A 89 689 201 HOH HOH . 
G 5 HOH A 90 690 159 HOH HOH . 
G 5 HOH A 91 691 51 HOH HOH . 
G 5 HOH A 92 692 40 HOH HOH . 
G 5 HOH A 93 693 165 HOH HOH . 
G 5 HOH A 94 694 215 HOH HOH . 
G 5 HOH A 95 695 203 HOH HOH . 
G 5 HOH A 96 696 167 HOH HOH . 
G 5 HOH A 97 697 188 HOH HOH . 
H 5 HOH B 1 601 118 HOH HOH . 
H 5 HOH B 2 602 181 HOH HOH . 
H 5 HOH B 3 603 117 HOH HOH . 
H 5 HOH B 4 604 100 HOH HOH . 
H 5 HOH B 5 605 174 HOH HOH . 
H 5 HOH B 6 606 99 HOH HOH . 
H 5 HOH B 7 607 226 HOH HOH . 
H 5 HOH B 8 608 21 HOH HOH . 
H 5 HOH B 9 609 81 HOH HOH . 
H 5 HOH B 10 610 145 HOH HOH . 
H 5 HOH B 11 611 107 HOH HOH . 
H 5 HOH B 12 612 79 HOH HOH . 
H 5 HOH B 13 613 103 HOH HOH . 
H 5 HOH B 14 614 243 HOH HOH . 
H 5 HOH B 15 615 133 HOH HOH . 
H 5 HOH B 16 616 142 HOH HOH . 
H 5 HOH B 17 617 97 HOH HOH . 
H 5 HOH B 18 618 110 HOH HOH . 
H 5 HOH B 19 619 224 HOH HOH . 
H 5 HOH B 20 620 134 HOH HOH . 
H 5 HOH B 21 621 84 HOH HOH . 
H 5 HOH B 22 622 94 HOH HOH . 
H 5 HOH B 23 623 105 HOH HOH . 
H 5 HOH B 24 624 176 HOH HOH . 
H 5 HOH B 25 625 194 HOH HOH . 
H 5 HOH B 26 626 228 HOH HOH . 
H 5 HOH B 27 627 114 HOH HOH . 
H 5 HOH B 28 628 111 HOH HOH . 
H 5 HOH B 29 629 143 HOH HOH . 
H 5 HOH B 30 630 161 HOH HOH . 
H 5 HOH B 31 631 66 HOH HOH . 
H 5 HOH B 32 632 168 HOH HOH . 
H 5 HOH B 33 633 95 HOH HOH . 
H 5 HOH B 34 634 82 HOH HOH . 
H 5 HOH B 35 635 83 HOH HOH . 
H 5 HOH B 36 636 127 HOH HOH . 
H 5 HOH B 37 637 76 HOH HOH . 
H 5 HOH B 38 638 185 HOH HOH . 
H 5 HOH B 39 639 87 HOH HOH . 
H 5 HOH B 40 640 96 HOH HOH . 
H 5 HOH B 41 641 109 HOH HOH . 
H 5 HOH B 42 642 72 HOH HOH . 
H 5 HOH B 43 643 63 HOH HOH . 
H 5 HOH B 44 644 113 HOH HOH . 
H 5 HOH B 45 645 57 HOH HOH . 
H 5 HOH B 46 646 17 HOH HOH . 
H 5 HOH B 47 647 104 HOH HOH . 
H 5 HOH B 48 648 61 HOH HOH . 
H 5 HOH B 49 649 198 HOH HOH . 
H 5 HOH B 50 650 144 HOH HOH . 
H 5 HOH B 51 651 73 HOH HOH . 
H 5 HOH B 52 652 58 HOH HOH . 
H 5 HOH B 53 653 62 HOH HOH . 
H 5 HOH B 54 654 227 HOH HOH . 
H 5 HOH B 55 655 141 HOH HOH . 
H 5 HOH B 56 656 80 HOH HOH . 
H 5 HOH B 57 657 121 HOH HOH . 
H 5 HOH B 58 658 199 HOH HOH . 
H 5 HOH B 59 659 108 HOH HOH . 
H 5 HOH B 60 660 23 HOH HOH . 
H 5 HOH B 61 661 162 HOH HOH . 
H 5 HOH B 62 662 138 HOH HOH . 
H 5 HOH B 63 663 56 HOH HOH . 
H 5 HOH B 64 664 116 HOH HOH . 
H 5 HOH B 65 665 106 HOH HOH . 
H 5 HOH B 66 666 102 HOH HOH . 
H 5 HOH B 67 667 64 HOH HOH . 
H 5 HOH B 68 668 202 HOH HOH . 
H 5 HOH B 69 669 86 HOH HOH . 
H 5 HOH B 70 670 70 HOH HOH . 
H 5 HOH B 71 671 230 HOH HOH . 
H 5 HOH B 72 672 98 HOH HOH . 
H 5 HOH B 73 673 74 HOH HOH . 
H 5 HOH B 74 674 140 HOH HOH . 
H 5 HOH B 75 675 155 HOH HOH . 
H 5 HOH B 76 676 115 HOH HOH . 
H 5 HOH B 77 677 225 HOH HOH . 
H 5 HOH B 78 678 179 HOH HOH . 
H 5 HOH B 79 679 139 HOH HOH . 
H 5 HOH B 80 680 180 HOH HOH . 
H 5 HOH B 81 681 136 HOH HOH . 
H 5 HOH B 82 682 112 HOH HOH . 
H 5 HOH B 83 683 146 HOH HOH . 
H 5 HOH B 84 684 92 HOH HOH . 
H 5 HOH B 85 685 18 HOH HOH . 
H 5 HOH B 86 686 191 HOH HOH . 
H 5 HOH B 87 687 147 HOH HOH . 
H 5 HOH B 88 688 170 HOH HOH . 
H 5 HOH B 89 689 132 HOH HOH . 
H 5 HOH B 90 690 150 HOH HOH . 
H 5 HOH B 91 691 120 HOH HOH . 
H 5 HOH B 92 692 223 HOH HOH . 
H 5 HOH B 93 693 154 HOH HOH . 
H 5 HOH B 94 694 183 HOH HOH . 
H 5 HOH B 95 695 192 HOH HOH . 
H 5 HOH B 96 696 242 HOH HOH . 
H 5 HOH B 97 697 50 HOH HOH . 
H 5 HOH B 98 698 67 HOH HOH . 
H 5 HOH B 99 699 229 HOH HOH . 
H 5 HOH B 100 700 153 HOH HOH . 
H 5 HOH B 101 701 158 HOH HOH . 
H 5 HOH B 102 702 119 HOH HOH . 
H 5 HOH B 103 703 193 HOH HOH . 
H 5 HOH B 104 704 137 HOH HOH . 
H 5 HOH B 105 705 68 HOH HOH . 
H 5 HOH B 106 706 101 HOH HOH . 
H 5 HOH B 107 707 149 HOH HOH . 
H 5 HOH B 108 708 148 HOH HOH . 
H 5 HOH B 109 709 77 HOH HOH . 
H 5 HOH B 110 710 152 HOH HOH . 
H 5 HOH B 111 711 189 HOH HOH . 
H 5 HOH B 112 712 164 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . D 3 68.414 28.714 26.299 0.99 63.41 ? C1 PEG 502 A 1 
HETATM 2 O O1 PEG . . . D 3 67.449 27.842 26.832 0.99 63.64 ? O1 PEG 502 A 1 
HETATM 3 C C2 PEG . . . D 3 69.718 27.964 25.992 0.99 64.08 ? C2 PEG 502 A 1 
HETATM 4 O O2 PEG . . . D 3 70.766 28.858 25.708 0.99 65.95 ? O2 PEG 502 A 1 
HETATM 5 C C3 PEG . . . D 3 70.822 29.315 24.377 0.99 68.18 ? C3 PEG 502 A 1 
HETATM 6 C C4 PEG . . . D 3 70.7 30.838 24.285 0.99 69.05 ? C4 PEG 502 A 1 
HETATM 7 O O4 PEG . . . D 3 69.368 31.242 24.47 0.99 70.13 ? O4 PEG 502 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#