data_6FY4
#
_model_server_result.job_id            C9vC33PAsu_BqwLUQB89lQ 
_model_server_result.datetime_utc      '2025-01-20 13:25:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fy4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    6FY4 
#
_exptl.entry_id    6FY4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6FY4 
_cell.length_a            121.369 
_cell.length_b            121.369 
_cell.length_c            158.252 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FY4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        151 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 1 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G 1 1 
C,D,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 113 n n 
PA O2A FAD sing 114 n n 
PA O5B FAD sing 115 n n 
PA O3P FAD sing 116 n n 
O2A HOA2 FAD sing 117 n n 
O5B C5B FAD sing 118 n n 
C5B C4B FAD sing 119 n n 
C5B H51A FAD sing 120 n n 
C5B H52A FAD sing 121 n n 
C4B O4B FAD sing 122 n n 
C4B C3B FAD sing 123 n n 
C4B H4B FAD sing 124 n n 
O4B C1B FAD sing 125 n n 
C3B O3B FAD sing 126 n n 
C3B C2B FAD sing 127 n n 
C3B H3B FAD sing 128 n n 
O3B HO3A FAD sing 129 n n 
C2B O2B FAD sing 130 n n 
C2B C1B FAD sing 131 n n 
C2B H2B FAD sing 132 n n 
O2B HO2A FAD sing 133 n n 
C1B N9A FAD sing 134 n n 
C1B H1B FAD sing 135 n n 
N9A C8A FAD sing 136 n y 
N9A C4A FAD sing 137 n y 
C8A N7A FAD doub 138 n y 
C8A H8A FAD sing 139 n n 
N7A C5A FAD sing 140 n y 
C5A C6A FAD sing 141 n y 
C5A C4A FAD doub 142 n y 
C6A N6A FAD sing 143 n n 
C6A N1A FAD doub 144 n y 
N6A H61A FAD sing 145 n n 
N6A H62A FAD sing 146 n n 
N1A C2A FAD sing 147 n y 
C2A N3A FAD doub 148 n y 
C2A H2A FAD sing 149 n n 
N3A C4A FAD sing 150 n y 
N1 C2 FAD sing 151 n n 
N1 C10 FAD doub 152 n n 
C2 O2 FAD doub 153 n n 
C2 N3 FAD sing 154 n n 
N3 C4 FAD sing 155 n n 
N3 HN3 FAD sing 156 n n 
C4 O4 FAD doub 157 n n 
C4 C4X FAD sing 158 n n 
C4X N5 FAD doub 159 n n 
C4X C10 FAD sing 160 n n 
N5 C5X FAD sing 161 n n 
C5X C6 FAD doub 162 n y 
C5X C9A FAD sing 163 n y 
C6 C7 FAD sing 164 n y 
C6 H6 FAD sing 165 n n 
C7 C7M FAD sing 166 n n 
C7 C8 FAD doub 167 n y 
C7M HM71 FAD sing 168 n n 
C7M HM72 FAD sing 169 n n 
C7M HM73 FAD sing 170 n n 
C8 C8M FAD sing 171 n n 
C8 C9 FAD sing 172 n y 
C8M HM81 FAD sing 173 n n 
C8M HM82 FAD sing 174 n n 
C8M HM83 FAD sing 175 n n 
C9 C9A FAD doub 176 n y 
C9 H9 FAD sing 177 n n 
C9A N10 FAD sing 178 n n 
N10 C10 FAD sing 179 n n 
N10 C1' FAD sing 180 n n 
C1' C2' FAD sing 181 n n 
C1' "H1'1" FAD sing 182 n n 
C1' "H1'2" FAD sing 183 n n 
C2' O2' FAD sing 184 n n 
C2' C3' FAD sing 185 n n 
C2' H2' FAD sing 186 n n 
O2' HO2' FAD sing 187 n n 
C3' O3' FAD sing 188 n n 
C3' C4' FAD sing 189 n n 
C3' H3' FAD sing 190 n n 
O3' HO3' FAD sing 191 n n 
C4' O4' FAD sing 192 n n 
C4' C5' FAD sing 193 n n 
C4' H4' FAD sing 194 n n 
O4' HO4' FAD sing 195 n n 
C5' O5' FAD sing 196 n n 
C5' "H5'1" FAD sing 197 n n 
C5' "H5'2" FAD sing 198 n n 
O5' P FAD sing 199 n n 
P O1P FAD doub 200 n n 
P O2P FAD sing 201 n n 
P O3P FAD sing 202 n n 
O2P HOP2 FAD sing 203 n n 
#
_atom_sites.entry_id                     6FY4 
_atom_sites.fract_transf_matrix[1][1]    0.008239 
_atom_sites.fract_transf_matrix[1][2]    0.004757 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009514 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006319 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 301 1274 FAD FAD . 
F 3 EAW A 1 302 1 EAW CPE . 
G 2 FAD B 1 301 1274 FAD FAD . 
H 2 FAD C 1 301 1274 FAD FAD . 
I 2 FAD D 1 301 1274 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 19.975 -32.103 -18.221 1 34.85 ? PA FAD 301 A 1 
HETATM 2 O O1A FAD . . . E 2 20.634 -33.407 -18.585 1 48.24 ? O1A FAD 301 A 1 
HETATM 3 O O2A FAD . . . E 2 20.844 -31.022 -17.636 1 44.81 ? O2A FAD 301 A 1 
HETATM 4 O O5B FAD . . . E 2 19.138 -31.515 -19.457 1 32.62 ? O5B FAD 301 A 1 
HETATM 5 C C5B FAD . . . E 2 18.5 -32.387 -20.384 1 33.44 ? C5B FAD 301 A 1 
HETATM 6 C C4B FAD . . . E 2 18.935 -31.987 -21.789 1 37.11 ? C4B FAD 301 A 1 
HETATM 7 O O4B FAD . . . E 2 18.527 -30.64 -22.077 1 35.88 ? O4B FAD 301 A 1 
HETATM 8 C C3B FAD . . . E 2 20.452 -32.038 -21.942 1 33.3 ? C3B FAD 301 A 1 
HETATM 9 O O3B FAD . . . E 2 20.73 -32.651 -23.196 1 41.24 ? O3B FAD 301 A 1 
HETATM 10 C C2B FAD . . . E 2 20.911 -30.594 -22.015 1 34.64 ? C2B FAD 301 A 1 
HETATM 11 O O2B FAD . . . E 2 22.056 -30.429 -22.866 1 29.17 ? O2B FAD 301 A 1 
HETATM 12 C C1B FAD . . . E 2 19.669 -29.992 -22.635 1 31.58 ? C1B FAD 301 A 1 
HETATM 13 N N9A FAD . . . E 2 19.65 -28.53 -22.623 1 27.15 ? N9A FAD 301 A 1 
HETATM 14 C C8A FAD . . . E 2 20.403 -27.646 -21.946 1 34.71 ? C8A FAD 301 A 1 
HETATM 15 N N7A FAD . . . E 2 20.079 -26.358 -22.286 1 36.42 ? N7A FAD 301 A 1 
HETATM 16 C C5A FAD . . . E 2 19.107 -26.445 -23.231 1 39.38 ? C5A FAD 301 A 1 
HETATM 17 C C6A FAD . . . E 2 18.296 -25.529 -24.074 1 38.32 ? C6A FAD 301 A 1 
HETATM 18 N N6A FAD . . . E 2 18.411 -24.184 -24.003 1 40.56 ? N6A FAD 301 A 1 
HETATM 19 N N1A FAD . . . E 2 17.416 -26.079 -24.925 1 35.5 ? N1A FAD 301 A 1 
HETATM 20 C C2A FAD . . . E 2 17.243 -27.397 -25.057 1 34.89 ? C2A FAD 301 A 1 
HETATM 21 N N3A FAD . . . E 2 17.934 -28.281 -24.338 1 34.4 ? N3A FAD 301 A 1 
HETATM 22 C C4A FAD . . . E 2 18.851 -27.877 -23.439 1 33.82 ? C4A FAD 301 A 1 
HETATM 23 N N1 FAD . . . E 2 14.107 -38.382 -11.066 1 23.45 ? N1 FAD 301 A 1 
HETATM 24 C C2 FAD . . . E 2 12.883 -38.859 -10.761 1 28.07 ? C2 FAD 301 A 1 
HETATM 25 O O2 FAD . . . E 2 12.052 -38.949 -11.676 1 41.44 ? O2 FAD 301 A 1 
HETATM 26 N N3 FAD . . . E 2 12.5 -39.236 -9.544 1 21.65 ? N3 FAD 301 A 1 
HETATM 27 C C4 FAD . . . E 2 13.37 -39.154 -8.533 1 34.21 ? C4 FAD 301 A 1 
HETATM 28 O O4 FAD . . . E 2 13.022 -39.516 -7.384 1 40.29 ? O4 FAD 301 A 1 
HETATM 29 C C4X FAD . . . E 2 14.751 -38.648 -8.775 1 22.36 ? C4X FAD 301 A 1 
HETATM 30 N N5 FAD . . . E 2 15.681 -38.555 -7.813 1 23.75 ? N5 FAD 301 A 1 
HETATM 31 C C5X FAD . . . E 2 16.897 -38.011 -8.066 1 24.54 ? C5X FAD 301 A 1 
HETATM 32 C C6 FAD . . . E 2 17.811 -37.824 -7.026 1 18.96 ? C6 FAD 301 A 1 
HETATM 33 C C7 FAD . . . E 2 19.047 -37.243 -7.279 1 18.16 ? C7 FAD 301 A 1 
HETATM 34 C C7M FAD . . . E 2 20.052 -37.027 -6.179 1 19.06 ? C7M FAD 301 A 1 
HETATM 35 C C8 FAD . . . E 2 19.398 -36.811 -8.658 1 22.04 ? C8 FAD 301 A 1 
HETATM 36 C C8M FAD . . . E 2 20.737 -36.181 -8.888 1 18.8 ? C8M FAD 301 A 1 
HETATM 37 C C9 FAD . . . E 2 18.497 -36.99 -9.711 1 24.16 ? C9 FAD 301 A 1 
HETATM 38 C C9A FAD . . . E 2 17.255 -37.579 -9.449 1 22.27 ? C9A FAD 301 A 1 
HETATM 39 N N10 FAD . . . E 2 16.32 -37.772 -10.463 1 22.08 ? N10 FAD 301 A 1 
HETATM 40 C C10 FAD . . . E 2 15.064 -38.266 -10.139 1 20.55 ? C10 FAD 301 A 1 
HETATM 41 C C1' FAD . . . E 2 16.591 -37.384 -11.85 1 28.76 ? C1' FAD 301 A 1 
HETATM 42 C C2' FAD . . . E 2 16.405 -35.877 -12.048 1 32.84 ? C2' FAD 301 A 1 
HETATM 43 O O2' FAD . . . E 2 15.025 -35.478 -12.104 1 25.68 ? O2' FAD 301 A 1 
HETATM 44 C C3' FAD . . . E 2 17.13 -35.446 -13.316 1 35.28 ? C3' FAD 301 A 1 
HETATM 45 O O3' FAD . . . E 2 18.56 -35.508 -13.14 1 40.06 ? O3' FAD 301 A 1 
HETATM 46 C C4' FAD . . . E 2 16.744 -34.023 -13.655 1 30.4 ? C4' FAD 301 A 1 
HETATM 47 O O4' FAD . . . E 2 15.322 -33.986 -13.729 1 33.01 ? O4' FAD 301 A 1 
HETATM 48 C C5' FAD . . . E 2 17.348 -33.717 -15.001 1 31.05 ? C5' FAD 301 A 1 
HETATM 49 O O5' FAD . . . E 2 17.289 -32.339 -15.316 1 35.68 ? O5' FAD 301 A 1 
HETATM 50 P P FAD . . . E 2 18.673 -31.674 -15.787 1 41.55 ? P FAD 301 A 1 
HETATM 51 O O1P FAD . . . E 2 18.419 -30.196 -15.986 1 28.69 ? O1P FAD 301 A 1 
HETATM 52 O O2P FAD . . . E 2 19.815 -32.207 -14.939 1 28.28 ? O2P FAD 301 A 1 
HETATM 53 O O3P FAD . . . E 2 18.773 -32.414 -17.212 1 33.44 ? O3P FAD 301 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#