data_6FY4
#
_model_server_result.job_id            UKBKOhFRmxRSiSnRmZeDjQ 
_model_server_result.datetime_utc      '2025-01-05 07:15:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fy4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    6FY4 
#
_exptl.entry_id    6FY4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6FY4 
_cell.length_a            121.369 
_cell.length_b            121.369 
_cell.length_c            158.252 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FY4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        151 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 1 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G 1 1 
C,D,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 113 n n 
PA O2A FAD sing 114 n n 
PA O5B FAD sing 115 n n 
PA O3P FAD sing 116 n n 
O2A HOA2 FAD sing 117 n n 
O5B C5B FAD sing 118 n n 
C5B C4B FAD sing 119 n n 
C5B H51A FAD sing 120 n n 
C5B H52A FAD sing 121 n n 
C4B O4B FAD sing 122 n n 
C4B C3B FAD sing 123 n n 
C4B H4B FAD sing 124 n n 
O4B C1B FAD sing 125 n n 
C3B O3B FAD sing 126 n n 
C3B C2B FAD sing 127 n n 
C3B H3B FAD sing 128 n n 
O3B HO3A FAD sing 129 n n 
C2B O2B FAD sing 130 n n 
C2B C1B FAD sing 131 n n 
C2B H2B FAD sing 132 n n 
O2B HO2A FAD sing 133 n n 
C1B N9A FAD sing 134 n n 
C1B H1B FAD sing 135 n n 
N9A C8A FAD sing 136 n y 
N9A C4A FAD sing 137 n y 
C8A N7A FAD doub 138 n y 
C8A H8A FAD sing 139 n n 
N7A C5A FAD sing 140 n y 
C5A C6A FAD sing 141 n y 
C5A C4A FAD doub 142 n y 
C6A N6A FAD sing 143 n n 
C6A N1A FAD doub 144 n y 
N6A H61A FAD sing 145 n n 
N6A H62A FAD sing 146 n n 
N1A C2A FAD sing 147 n y 
C2A N3A FAD doub 148 n y 
C2A H2A FAD sing 149 n n 
N3A C4A FAD sing 150 n y 
N1 C2 FAD sing 151 n n 
N1 C10 FAD doub 152 n n 
C2 O2 FAD doub 153 n n 
C2 N3 FAD sing 154 n n 
N3 C4 FAD sing 155 n n 
N3 HN3 FAD sing 156 n n 
C4 O4 FAD doub 157 n n 
C4 C4X FAD sing 158 n n 
C4X N5 FAD doub 159 n n 
C4X C10 FAD sing 160 n n 
N5 C5X FAD sing 161 n n 
C5X C6 FAD doub 162 n y 
C5X C9A FAD sing 163 n y 
C6 C7 FAD sing 164 n y 
C6 H6 FAD sing 165 n n 
C7 C7M FAD sing 166 n n 
C7 C8 FAD doub 167 n y 
C7M HM71 FAD sing 168 n n 
C7M HM72 FAD sing 169 n n 
C7M HM73 FAD sing 170 n n 
C8 C8M FAD sing 171 n n 
C8 C9 FAD sing 172 n y 
C8M HM81 FAD sing 173 n n 
C8M HM82 FAD sing 174 n n 
C8M HM83 FAD sing 175 n n 
C9 C9A FAD doub 176 n y 
C9 H9 FAD sing 177 n n 
C9A N10 FAD sing 178 n n 
N10 C10 FAD sing 179 n n 
N10 C1' FAD sing 180 n n 
C1' C2' FAD sing 181 n n 
C1' "H1'1" FAD sing 182 n n 
C1' "H1'2" FAD sing 183 n n 
C2' O2' FAD sing 184 n n 
C2' C3' FAD sing 185 n n 
C2' H2' FAD sing 186 n n 
O2' HO2' FAD sing 187 n n 
C3' O3' FAD sing 188 n n 
C3' C4' FAD sing 189 n n 
C3' H3' FAD sing 190 n n 
O3' HO3' FAD sing 191 n n 
C4' O4' FAD sing 192 n n 
C4' C5' FAD sing 193 n n 
C4' H4' FAD sing 194 n n 
O4' HO4' FAD sing 195 n n 
C5' O5' FAD sing 196 n n 
C5' "H5'1" FAD sing 197 n n 
C5' "H5'2" FAD sing 198 n n 
O5' P FAD sing 199 n n 
P O1P FAD doub 200 n n 
P O2P FAD sing 201 n n 
P O3P FAD sing 202 n n 
O2P HOP2 FAD sing 203 n n 
#
_atom_sites.entry_id                     6FY4 
_atom_sites.fract_transf_matrix[1][1]    0.008239 
_atom_sites.fract_transf_matrix[1][2]    0.004757 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009514 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006319 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 301 1274 FAD FAD . 
F 3 EAW A 1 302 1 EAW CPE . 
G 2 FAD B 1 301 1274 FAD FAD . 
H 2 FAD C 1 301 1274 FAD FAD . 
I 2 FAD D 1 301 1274 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . H 2 41.056 -16.178 17.465 1 55.91 ? PA FAD 301 C 1 
HETATM 2 O O1A FAD . . . H 2 42.22 -16.86 16.767 1 38.38 ? O1A FAD 301 C 1 
HETATM 3 O O2A FAD . . . H 2 39.653 -16.744 17.547 1 39.75 ? O2A FAD 301 C 1 
HETATM 4 O O5B FAD . . . H 2 41.519 -16.03 18.997 1 57.63 ? O5B FAD 301 C 1 
HETATM 5 C C5B FAD . . . H 2 41.662 -14.776 19.651 1 48.54 ? C5B FAD 301 C 1 
HETATM 6 C C4B FAD . . . H 2 41.728 -15.074 21.13 1 42.69 ? C4B FAD 301 C 1 
HETATM 7 O O4B FAD . . . H 2 40.749 -14.324 21.847 1 48.59 ? O4B FAD 301 C 1 
HETATM 8 C C3B FAD . . . H 2 41.368 -16.521 21.321 1 42.68 ? C3B FAD 301 C 1 
HETATM 9 O O3B FAD . . . H 2 42.238 -17.012 22.345 1 52.1 ? O3B FAD 301 C 1 
HETATM 10 C C2B FAD . . . H 2 39.895 -16.496 21.695 1 41.94 ? C2B FAD 301 C 1 
HETATM 11 O O2B FAD . . . H 2 39.529 -17.667 22.43 1 41.8 ? O2B FAD 301 C 1 
HETATM 12 C C1B FAD . . . H 2 39.805 -15.201 22.49 1 49.3 ? C1B FAD 301 C 1 
HETATM 13 N N9A FAD . . . H 2 38.484 -14.503 22.586 1 49.05 ? N9A FAD 301 C 1 
HETATM 14 C C8A FAD . . . H 2 37.47 -14.475 21.699 1 48.52 ? C8A FAD 301 C 1 
HETATM 15 N N7A FAD . . . H 2 36.44 -13.696 22.141 1 50.51 ? N7A FAD 301 C 1 
HETATM 16 C C5A FAD . . . H 2 36.785 -13.19 23.347 1 57.43 ? C5A FAD 301 C 1 
HETATM 17 C C6A FAD . . . H 2 36.173 -12.293 24.382 1 56.85 ? C6A FAD 301 C 1 
HETATM 18 N N6A FAD . . . H 2 34.934 -11.728 24.261 1 45.2 ? N6A FAD 301 C 1 
HETATM 19 N N1A FAD . . . H 2 36.917 -12.054 25.49 1 58.27 ? N1A FAD 301 C 1 
HETATM 20 C C2A FAD . . . H 2 38.146 -12.574 25.675 1 56.38 ? C2A FAD 301 C 1 
HETATM 21 N N3A FAD . . . H 2 38.757 -13.386 24.792 1 57.47 ? N3A FAD 301 C 1 
HETATM 22 C C4A FAD . . . H 2 38.138 -13.728 23.627 1 57.42 ? C4A FAD 301 C 1 
HETATM 23 N N1 FAD . . . H 2 48.163 -13.688 10.007 1 32.29 ? N1 FAD 301 C 1 
HETATM 24 C C2 FAD . . . H 2 49.088 -12.79 9.635 1 35.75 ? C2 FAD 301 C 1 
HETATM 25 O O2 FAD . . . H 2 49.608 -12.129 10.552 1 41.98 ? O2 FAD 301 C 1 
HETATM 26 N N3 FAD . . . H 2 49.46 -12.583 8.353 1 32.49 ? N3 FAD 301 C 1 
HETATM 27 C C4 FAD . . . H 2 48.926 -13.264 7.342 1 33.93 ? C4 FAD 301 C 1 
HETATM 28 O O4 FAD . . . H 2 49.26 -13.061 6.157 1 37.11 ? O4 FAD 301 C 1 
HETATM 29 C C4X FAD . . . H 2 47.9 -14.273 7.655 1 34.23 ? C4X FAD 301 C 1 
HETATM 30 N N5 FAD . . . H 2 47.318 -15.011 6.694 1 33.5 ? N5 FAD 301 C 1 
HETATM 31 C C5X FAD . . . H 2 46.22 -15.727 7.009 1 35.8 ? C5X FAD 301 C 1 
HETATM 32 C C6 FAD . . . H 2 45.456 -16.286 5.989 1 35.48 ? C6 FAD 301 C 1 
HETATM 33 C C7 FAD . . . H 2 44.318 -17.015 6.304 1 30.76 ? C7 FAD 301 C 1 
HETATM 34 C C7M FAD . . . H 2 43.481 -17.614 5.214 1 34.42 ? C7M FAD 301 C 1 
HETATM 35 C C8 FAD . . . H 2 43.899 -17.201 7.717 1 34.15 ? C8 FAD 301 C 1 
HETATM 36 C C8M FAD . . . H 2 42.653 -17.993 8.053 1 27.67 ? C8M FAD 301 C 1 
HETATM 37 C C9 FAD . . . H 2 44.668 -16.65 8.727 1 31.83 ? C9 FAD 301 C 1 
HETATM 38 C C9A FAD . . . H 2 45.814 -15.92 8.433 1 31.67 ? C9A FAD 301 C 1 
HETATM 39 N N10 FAD . . . H 2 46.598 -15.361 9.473 1 32.49 ? N10 FAD 301 C 1 
HETATM 40 C C10 FAD . . . H 2 47.555 -14.437 9.083 1 32.48 ? C10 FAD 301 C 1 
HETATM 41 C C1' FAD . . . H 2 46.284 -15.499 10.908 1 26.76 ? C1' FAD 301 C 1 
HETATM 42 C C2' FAD . . . H 2 45.228 -14.478 11.33 1 37.48 ? C2' FAD 301 C 1 
HETATM 43 O O2' FAD . . . H 2 45.822 -13.172 11.413 1 36.8 ? O2' FAD 301 C 1 
HETATM 44 C C3' FAD . . . H 2 44.603 -14.901 12.66 1 38.23 ? C3' FAD 301 C 1 
HETATM 45 O O3' FAD . . . H 2 44.168 -16.25 12.462 1 31.04 ? O3' FAD 301 C 1 
HETATM 46 C C4' FAD . . . H 2 43.436 -14.023 13.132 1 29.49 ? C4' FAD 301 C 1 
HETATM 47 O O4' FAD . . . H 2 43.828 -12.668 13.32 1 30.45 ? O4' FAD 301 C 1 
HETATM 48 C C5' FAD . . . H 2 42.929 -14.445 14.495 1 39.81 ? C5' FAD 301 C 1 
HETATM 49 O O5' FAD . . . H 2 41.886 -13.552 14.904 1 40.91 ? O5' FAD 301 C 1 
HETATM 50 P P FAD . . . H 2 40.541 -14.233 15.471 1 42.32 ? P FAD 301 C 1 
HETATM 51 O O1P FAD . . . H 2 39.403 -13.243 15.573 1 33.63 ? O1P FAD 301 C 1 
HETATM 52 O O2P FAD . . . H 2 40.384 -15.485 14.651 1 37.07 ? O2P FAD 301 C 1 
HETATM 53 O O3P FAD . . . H 2 40.975 -14.645 16.966 1 48.02 ? O3P FAD 301 C 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           53 
#