data_6FYP # _model_server_result.job_id 1znFLsm5FqBL-I_vqfFShw _model_server_result.datetime_utc '2024-11-26 06:52:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fyp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6FYP # _exptl.entry_id 6FYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.77 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.1 _cell.angle_gamma 90 _cell.entry_id 6FYP _cell.length_a 91.197 _cell.length_b 61.998 _cell.length_c 73.328 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H12 Cl N3 O2' _chem_comp.formula_weight 349.77 _chem_comp.id 3NG _chem_comp.mon_nstd_flag . _chem_comp.name '5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 3NG doub 1 n y C1 N9 3NG sing 2 n y C1 C6 3NG sing 3 n y C2 C3 3NG sing 4 n y C8 C2 3NG sing 5 n y C3 C4 3NG doub 6 n y C3 H3 3NG sing 7 n n C4 C5 3NG sing 8 n y C4 H4 3NG sing 9 n n C5 C6 3NG doub 10 n y C5 C23 3NG sing 11 n n C6 H6 3NG sing 12 n n C14 C7 3NG sing 13 n y C10 C7 3NG sing 14 n y C7 C8 3NG doub 15 n y C8 C13 3NG sing 16 n y C10 N9 3NG doub 17 n y N15 C10 3NG sing 18 n n C14 C11 3NG doub 19 n y C11 N12 3NG sing 20 n y C11 H11 3NG sing 21 n n N12 C13 3NG doub 22 n y C13 H13 3NG sing 23 n n C14 H14 3NG sing 24 n n C16 N15 3NG sing 25 n n N15 HN15 3NG sing 26 n n C21 C16 3NG doub 27 n y C16 C17 3NG sing 28 n y C18 C17 3NG doub 29 n y C17 H17 3NG sing 30 n n C19 C18 3NG sing 31 n y C18 CL22 3NG sing 32 n n C20 C19 3NG doub 33 n y C19 H19 3NG sing 34 n n C20 C21 3NG sing 35 n y C20 H20 3NG sing 36 n n C21 H21 3NG sing 37 n n O24 C23 3NG doub 38 n n C23 O25 3NG sing 39 n n O25 HO25 3NG sing 40 n n # _atom_sites.entry_id 6FYP _atom_sites.fract_transf_matrix[1][1] 0.010965 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001366 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01613 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3NG A 1 501 1 3NG LI1 . C 3 HOH A 1 601 29 HOH HOH . C 3 HOH A 2 602 20 HOH HOH . C 3 HOH A 3 603 27 HOH HOH . C 3 HOH A 4 604 11 HOH HOH . C 3 HOH A 5 605 51 HOH HOH . C 3 HOH A 6 606 18 HOH HOH . C 3 HOH A 7 607 15 HOH HOH . C 3 HOH A 8 608 21 HOH HOH . C 3 HOH A 9 609 54 HOH HOH . C 3 HOH A 10 610 40 HOH HOH . C 3 HOH A 11 611 22 HOH HOH . C 3 HOH A 12 612 28 HOH HOH . C 3 HOH A 13 613 17 HOH HOH . C 3 HOH A 14 614 3 HOH HOH . C 3 HOH A 15 615 6 HOH HOH . C 3 HOH A 16 616 7 HOH HOH . C 3 HOH A 17 617 23 HOH HOH . C 3 HOH A 18 618 80 HOH HOH . C 3 HOH A 19 619 13 HOH HOH . C 3 HOH A 20 620 25 HOH HOH . C 3 HOH A 21 621 70 HOH HOH . C 3 HOH A 22 622 5 HOH HOH . C 3 HOH A 23 623 19 HOH HOH . C 3 HOH A 24 624 2 HOH HOH . C 3 HOH A 25 625 14 HOH HOH . C 3 HOH A 26 626 16 HOH HOH . C 3 HOH A 27 627 53 HOH HOH . C 3 HOH A 28 628 9 HOH HOH . C 3 HOH A 29 629 61 HOH HOH . C 3 HOH A 30 630 32 HOH HOH . C 3 HOH A 31 631 4 HOH HOH . C 3 HOH A 32 632 43 HOH HOH . C 3 HOH A 33 633 58 HOH HOH . C 3 HOH A 34 634 75 HOH HOH . C 3 HOH A 35 635 1 HOH HOH . C 3 HOH A 36 636 26 HOH HOH . C 3 HOH A 37 637 8 HOH HOH . C 3 HOH A 38 638 81 HOH HOH . C 3 HOH A 39 639 52 HOH HOH . C 3 HOH A 40 640 39 HOH HOH . C 3 HOH A 41 641 12 HOH HOH . C 3 HOH A 42 642 45 HOH HOH . C 3 HOH A 43 643 79 HOH HOH . C 3 HOH A 44 644 56 HOH HOH . C 3 HOH A 45 645 10 HOH HOH . C 3 HOH A 46 646 37 HOH HOH . C 3 HOH A 47 647 41 HOH HOH . C 3 HOH A 48 648 57 HOH HOH . C 3 HOH A 49 649 48 HOH HOH . C 3 HOH A 50 650 33 HOH HOH . C 3 HOH A 51 651 38 HOH HOH . C 3 HOH A 52 652 47 HOH HOH . C 3 HOH A 53 653 69 HOH HOH . C 3 HOH A 54 654 78 HOH HOH . C 3 HOH A 55 655 60 HOH HOH . C 3 HOH A 56 656 49 HOH HOH . C 3 HOH A 57 657 36 HOH HOH . C 3 HOH A 58 658 30 HOH HOH . C 3 HOH A 59 659 67 HOH HOH . C 3 HOH A 60 660 35 HOH HOH . C 3 HOH A 61 661 55 HOH HOH . C 3 HOH A 62 662 62 HOH HOH . C 3 HOH A 63 663 50 HOH HOH . C 3 HOH A 64 664 34 HOH HOH . C 3 HOH A 65 665 44 HOH HOH . C 3 HOH A 66 666 73 HOH HOH . C 3 HOH A 67 667 68 HOH HOH . C 3 HOH A 68 668 46 HOH HOH . C 3 HOH A 69 669 72 HOH HOH . C 3 HOH A 70 670 77 HOH HOH . C 3 HOH A 71 671 42 HOH HOH . C 3 HOH A 72 672 31 HOH HOH . C 3 HOH A 73 673 63 HOH HOH . C 3 HOH A 74 674 71 HOH HOH . C 3 HOH A 75 675 76 HOH HOH . C 3 HOH A 76 676 65 HOH HOH . C 3 HOH A 77 677 74 HOH HOH . C 3 HOH A 78 678 24 HOH HOH . C 3 HOH A 79 679 64 HOH HOH . C 3 HOH A 80 680 66 HOH HOH . C 3 HOH A 81 681 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3NG . . . B 2 -8.493 -16.982 15.817 1 39.08 ? C1 3NG 501 A 1 HETATM 2 C C2 3NG . . . B 2 -8.249 -17.12 14.431 1 39.45 ? C2 3NG 501 A 1 HETATM 3 C C3 3NG . . . B 2 -7.972 -18.431 13.956 1 38.05 ? C3 3NG 501 A 1 HETATM 4 C C4 3NG . . . B 2 -7.953 -19.535 14.826 1 39.01 ? C4 3NG 501 A 1 HETATM 5 C C5 3NG . . . B 2 -8.195 -19.362 16.205 1 39.17 ? C5 3NG 501 A 1 HETATM 6 C C6 3NG . . . B 2 -8.472 -18.078 16.688 1 37.53 ? C6 3NG 501 A 1 HETATM 7 C C7 3NG . . . B 2 -8.582 -14.698 14.242 1 40.41 ? C7 3NG 501 A 1 HETATM 8 C C8 3NG . . . B 2 -8.295 -15.943 13.633 1 39.73 ? C8 3NG 501 A 1 HETATM 9 N N9 3NG . . . B 2 -8.77 -15.776 16.364 1 39.83 ? N9 3NG 501 A 1 HETATM 10 C C10 3NG . . . B 2 -8.824 -14.637 15.629 1 40.63 ? C10 3NG 501 A 1 HETATM 11 C C11 3NG . . . B 2 -8.391 -13.611 12.065 1 41.47 ? C11 3NG 501 A 1 HETATM 12 N N12 3NG . . . B 2 -8.128 -14.803 11.49 1 39.43 ? N12 3NG 501 A 1 HETATM 13 C C13 3NG . . . B 2 -8.087 -15.928 12.232 1 39.84 ? C13 3NG 501 A 1 HETATM 14 C C14 3NG . . . B 2 -8.627 -13.538 13.446 1 41.62 ? C14 3NG 501 A 1 HETATM 15 N N15 3NG . . . B 2 -9.108 -13.459 16.259 1 41.05 ? N15 3NG 501 A 1 HETATM 16 C C16 3NG . . . B 2 -9.212 -13.252 17.603 1 42.29 ? C16 3NG 501 A 1 HETATM 17 C C17 3NG . . . B 2 -8.338 -13.851 18.521 1 43.43 ? C17 3NG 501 A 1 HETATM 18 C C18 3NG . . . B 2 -8.456 -13.615 19.894 1 45.99 ? C18 3NG 501 A 1 HETATM 19 C C19 3NG . . . B 2 -9.459 -12.755 20.378 1 45.22 ? C19 3NG 501 A 1 HETATM 20 C C20 3NG . . . B 2 -10.337 -12.143 19.474 1 43.78 ? C20 3NG 501 A 1 HETATM 21 C C21 3NG . . . B 2 -10.215 -12.395 18.098 1 43.47 ? C21 3NG 501 A 1 HETATM 22 CL CL22 3NG . . . B 2 -7.338 -14.41 20.994 1 48.6 ? CL22 3NG 501 A 1 HETATM 23 C C23 3NG . . . B 2 -8.207 -20.558 17.133 1 39.91 ? C23 3NG 501 A 1 HETATM 24 O O24 3NG . . . B 2 -8.594 -21.736 16.623 1 38.93 ? O24 3NG 501 A 1 HETATM 25 O O25 3NG . . . B 2 -7.954 -20.443 18.326 1 40.53 ? O25 3NG 501 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #