data_6FZ3
#
_model_server_result.job_id            wXjIhG2GX4eh2tiF2UQfyg 
_model_server_result.datetime_utc      '2024-11-24 00:50:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fz3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1003}' 
#
_entry.id    6FZ3 
#
_exptl.entry_id    6FZ3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.18 
_cell.angle_gamma         90 
_cell.entry_id            6FZ3 
_cell.length_a            91.278 
_cell.length_b            58 
_cell.length_c            153.309 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FZ3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1 
B,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LEU 161 A LEU 254 1_555 E MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? 
metalc ? metalc2 D O1A MYA . A MYA 1001 1_555 E MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? 
metalc ? metalc3 D O5A MYA . A MYA 1001 1_555 E MG MG . A MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? 
metalc ? metalc4 B O LEU 161 B LEU 254 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc5 H O1A MYA . B MYA 1001 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.987 ? 
metalc ? metalc6 H O5A MYA . B MYA 1001 1_555 I MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.988 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 191 n n 
C1 C2 GOL sing 192 n n 
C1 H11 GOL sing 193 n n 
C1 H12 GOL sing 194 n n 
O1 HO1 GOL sing 195 n n 
C2 O2 GOL sing 196 n n 
C2 C3 GOL sing 197 n n 
C2 H2 GOL sing 198 n n 
O2 HO2 GOL sing 199 n n 
C3 O3 GOL sing 200 n n 
C3 H31 GOL sing 201 n n 
C3 H32 GOL sing 202 n n 
O3 HO3 GOL sing 203 n n 
#
_atom_sites.entry_id                     6FZ3 
_atom_sites.fract_transf_matrix[1][1]    0.010956 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000417 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017241 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006527 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EBK A 1 1000 1000 EBK LIG . 
D 3 MYA A 1 1001 1001 MYA MYA . 
E 4 MG A 1 1002 1002 MG MG . 
F 5 GOL A 1 1003 1003 GOL GOL . 
G 2 EBK B 1 1000 1000 EBK LIG . 
H 3 MYA B 1 1001 1001 MYA MYA . 
I 4 MG B 1 1002 1002 MG MG . 
J 5 GOL B 1 1003 1003 GOL GOL . 
K 6 HOH A 1 1101 97 HOH HOH . 
K 6 HOH A 2 1102 167 HOH HOH . 
K 6 HOH A 3 1103 58 HOH HOH . 
K 6 HOH A 4 1104 44 HOH HOH . 
K 6 HOH A 5 1105 19 HOH HOH . 
K 6 HOH A 6 1106 158 HOH HOH . 
K 6 HOH A 7 1107 171 HOH HOH . 
K 6 HOH A 8 1108 68 HOH HOH . 
K 6 HOH A 9 1109 95 HOH HOH . 
K 6 HOH A 10 1110 48 HOH HOH . 
K 6 HOH A 11 1111 67 HOH HOH . 
K 6 HOH A 12 1112 177 HOH HOH . 
K 6 HOH A 13 1113 123 HOH HOH . 
K 6 HOH A 14 1114 101 HOH HOH . 
K 6 HOH A 15 1115 34 HOH HOH . 
K 6 HOH A 16 1116 61 HOH HOH . 
K 6 HOH A 17 1117 181 HOH HOH . 
K 6 HOH A 18 1118 41 HOH HOH . 
K 6 HOH A 19 1119 21 HOH HOH . 
K 6 HOH A 20 1120 170 HOH HOH . 
K 6 HOH A 21 1121 126 HOH HOH . 
K 6 HOH A 22 1122 104 HOH HOH . 
K 6 HOH A 23 1123 27 HOH HOH . 
K 6 HOH A 24 1124 106 HOH HOH . 
K 6 HOH A 25 1125 76 HOH HOH . 
K 6 HOH A 26 1126 91 HOH HOH . 
K 6 HOH A 27 1127 116 HOH HOH . 
K 6 HOH A 28 1128 103 HOH HOH . 
K 6 HOH A 29 1129 5 HOH HOH . 
K 6 HOH A 30 1130 125 HOH HOH . 
K 6 HOH A 31 1131 18 HOH HOH . 
K 6 HOH A 32 1132 73 HOH HOH . 
K 6 HOH A 33 1133 132 HOH HOH . 
K 6 HOH A 34 1134 40 HOH HOH . 
K 6 HOH A 35 1135 82 HOH HOH . 
K 6 HOH A 36 1136 57 HOH HOH . 
K 6 HOH A 37 1137 124 HOH HOH . 
K 6 HOH A 38 1138 152 HOH HOH . 
K 6 HOH A 39 1139 54 HOH HOH . 
K 6 HOH A 40 1140 71 HOH HOH . 
K 6 HOH A 41 1141 53 HOH HOH . 
K 6 HOH A 42 1142 151 HOH HOH . 
K 6 HOH A 43 1143 85 HOH HOH . 
K 6 HOH A 44 1144 107 HOH HOH . 
K 6 HOH A 45 1145 60 HOH HOH . 
K 6 HOH A 46 1146 28 HOH HOH . 
K 6 HOH A 47 1147 11 HOH HOH . 
K 6 HOH A 48 1148 165 HOH HOH . 
K 6 HOH A 49 1149 30 HOH HOH . 
K 6 HOH A 50 1150 32 HOH HOH . 
K 6 HOH A 51 1151 77 HOH HOH . 
K 6 HOH A 52 1152 93 HOH HOH . 
K 6 HOH A 53 1153 81 HOH HOH . 
K 6 HOH A 54 1154 55 HOH HOH . 
K 6 HOH A 55 1155 122 HOH HOH . 
K 6 HOH A 56 1156 127 HOH HOH . 
K 6 HOH A 57 1157 90 HOH HOH . 
K 6 HOH A 58 1158 92 HOH HOH . 
K 6 HOH A 59 1159 145 HOH HOH . 
K 6 HOH A 60 1160 109 HOH HOH . 
K 6 HOH A 61 1161 118 HOH HOH . 
K 6 HOH A 62 1162 120 HOH HOH . 
K 6 HOH A 63 1163 87 HOH HOH . 
K 6 HOH A 64 1164 179 HOH HOH . 
K 6 HOH A 65 1165 133 HOH HOH . 
K 6 HOH A 66 1166 164 HOH HOH . 
K 6 HOH A 67 1167 75 HOH HOH . 
K 6 HOH A 68 1168 14 HOH HOH . 
K 6 HOH A 69 1169 47 HOH HOH . 
K 6 HOH A 70 1170 17 HOH HOH . 
K 6 HOH A 71 1171 110 HOH HOH . 
K 6 HOH A 72 1172 78 HOH HOH . 
K 6 HOH A 73 1173 166 HOH HOH . 
K 6 HOH A 74 1174 39 HOH HOH . 
K 6 HOH A 75 1175 98 HOH HOH . 
K 6 HOH A 76 1176 37 HOH HOH . 
K 6 HOH A 77 1177 33 HOH HOH . 
K 6 HOH A 78 1178 64 HOH HOH . 
K 6 HOH A 79 1179 180 HOH HOH . 
K 6 HOH A 80 1180 9 HOH HOH . 
K 6 HOH A 81 1181 42 HOH HOH . 
K 6 HOH A 82 1182 108 HOH HOH . 
K 6 HOH A 83 1183 49 HOH HOH . 
K 6 HOH A 84 1184 20 HOH HOH . 
K 6 HOH A 85 1185 45 HOH HOH . 
K 6 HOH A 86 1186 4 HOH HOH . 
K 6 HOH A 87 1187 105 HOH HOH . 
K 6 HOH A 88 1188 157 HOH HOH . 
K 6 HOH A 89 1189 59 HOH HOH . 
K 6 HOH A 90 1190 150 HOH HOH . 
K 6 HOH A 91 1191 8 HOH HOH . 
K 6 HOH A 92 1192 135 HOH HOH . 
K 6 HOH A 93 1193 26 HOH HOH . 
K 6 HOH A 94 1194 10 HOH HOH . 
K 6 HOH A 95 1195 168 HOH HOH . 
K 6 HOH A 96 1196 50 HOH HOH . 
K 6 HOH A 97 1197 12 HOH HOH . 
K 6 HOH A 98 1198 112 HOH HOH . 
K 6 HOH A 99 1199 84 HOH HOH . 
K 6 HOH A 100 1200 143 HOH HOH . 
K 6 HOH A 101 1201 35 HOH HOH . 
K 6 HOH A 102 1202 141 HOH HOH . 
K 6 HOH A 103 1203 89 HOH HOH . 
K 6 HOH A 104 1204 134 HOH HOH . 
K 6 HOH A 105 1205 137 HOH HOH . 
K 6 HOH A 106 1206 136 HOH HOH . 
K 6 HOH A 107 1207 94 HOH HOH . 
K 6 HOH A 108 1208 139 HOH HOH . 
K 6 HOH A 109 1209 144 HOH HOH . 
K 6 HOH A 110 1210 148 HOH HOH . 
K 6 HOH A 111 1211 142 HOH HOH . 
K 6 HOH A 112 1212 147 HOH HOH . 
K 6 HOH A 113 1213 146 HOH HOH . 
K 6 HOH A 114 1214 156 HOH HOH . 
L 6 HOH B 1 1101 169 HOH HOH . 
L 6 HOH B 2 1102 175 HOH HOH . 
L 6 HOH B 3 1103 80 HOH HOH . 
L 6 HOH B 4 1104 176 HOH HOH . 
L 6 HOH B 5 1105 119 HOH HOH . 
L 6 HOH B 6 1106 153 HOH HOH . 
L 6 HOH B 7 1107 25 HOH HOH . 
L 6 HOH B 8 1108 155 HOH HOH . 
L 6 HOH B 9 1109 130 HOH HOH . 
L 6 HOH B 10 1110 99 HOH HOH . 
L 6 HOH B 11 1111 163 HOH HOH . 
L 6 HOH B 12 1112 70 HOH HOH . 
L 6 HOH B 13 1113 129 HOH HOH . 
L 6 HOH B 14 1114 56 HOH HOH . 
L 6 HOH B 15 1115 1 HOH HOH . 
L 6 HOH B 16 1116 29 HOH HOH . 
L 6 HOH B 17 1117 159 HOH HOH . 
L 6 HOH B 18 1118 172 HOH HOH . 
L 6 HOH B 19 1119 83 HOH HOH . 
L 6 HOH B 20 1120 79 HOH HOH . 
L 6 HOH B 21 1121 22 HOH HOH . 
L 6 HOH B 22 1122 2 HOH HOH . 
L 6 HOH B 23 1123 69 HOH HOH . 
L 6 HOH B 24 1124 131 HOH HOH . 
L 6 HOH B 25 1125 38 HOH HOH . 
L 6 HOH B 26 1126 15 HOH HOH . 
L 6 HOH B 27 1127 46 HOH HOH . 
L 6 HOH B 28 1128 6 HOH HOH . 
L 6 HOH B 29 1129 86 HOH HOH . 
L 6 HOH B 30 1130 16 HOH HOH . 
L 6 HOH B 31 1131 52 HOH HOH . 
L 6 HOH B 32 1132 31 HOH HOH . 
L 6 HOH B 33 1133 102 HOH HOH . 
L 6 HOH B 34 1134 162 HOH HOH . 
L 6 HOH B 35 1135 111 HOH HOH . 
L 6 HOH B 36 1136 62 HOH HOH . 
L 6 HOH B 37 1137 154 HOH HOH . 
L 6 HOH B 38 1138 96 HOH HOH . 
L 6 HOH B 39 1139 36 HOH HOH . 
L 6 HOH B 40 1140 114 HOH HOH . 
L 6 HOH B 41 1141 174 HOH HOH . 
L 6 HOH B 42 1142 161 HOH HOH . 
L 6 HOH B 43 1143 178 HOH HOH . 
L 6 HOH B 44 1144 115 HOH HOH . 
L 6 HOH B 45 1145 63 HOH HOH . 
L 6 HOH B 46 1146 51 HOH HOH . 
L 6 HOH B 47 1147 121 HOH HOH . 
L 6 HOH B 48 1148 74 HOH HOH . 
L 6 HOH B 49 1149 128 HOH HOH . 
L 6 HOH B 50 1150 100 HOH HOH . 
L 6 HOH B 51 1151 24 HOH HOH . 
L 6 HOH B 52 1152 43 HOH HOH . 
L 6 HOH B 53 1153 13 HOH HOH . 
L 6 HOH B 54 1154 66 HOH HOH . 
L 6 HOH B 55 1155 88 HOH HOH . 
L 6 HOH B 56 1156 149 HOH HOH . 
L 6 HOH B 57 1157 160 HOH HOH . 
L 6 HOH B 58 1158 3 HOH HOH . 
L 6 HOH B 59 1159 65 HOH HOH . 
L 6 HOH B 60 1160 23 HOH HOH . 
L 6 HOH B 61 1161 7 HOH HOH . 
L 6 HOH B 62 1162 138 HOH HOH . 
L 6 HOH B 63 1163 113 HOH HOH . 
L 6 HOH B 64 1164 72 HOH HOH . 
L 6 HOH B 65 1165 173 HOH HOH . 
L 6 HOH B 66 1166 140 HOH HOH . 
L 6 HOH B 67 1167 117 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 5 -2.392 19.015 61.16 1 19.43 ? C1 GOL 1003 A 1 
HETATM 2 O O1 GOL . . . F 5 -1.202 18.204 61.268 1 18.53 ? O1 GOL 1003 A 1 
HETATM 3 C C2 GOL . . . F 5 -3.567 18.196 61.647 1 19.99 ? C2 GOL 1003 A 1 
HETATM 4 O O2 GOL . . . F 5 -4.795 18.852 61.324 1 20.77 ? O2 GOL 1003 A 1 
HETATM 5 C C3 GOL . . . F 5 -3.5 17.998 63.17 1 20.29 ? C3 GOL 1003 A 1 
HETATM 6 O O3 GOL . . . F 5 -4.648 17.238 63.605 1 20.9 ? O3 GOL 1003 A 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           57 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           974 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           6 
#