data_6FZ4 # _model_server_result.job_id vjM0fZwcPUmOdkctFX4KFg _model_server_result.datetime_utc '2024-11-06 14:37:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 6FZ4 # _exptl.entry_id 6FZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FZ4 _cell.length_a 88.867 _cell.length_b 88.867 _cell.length_c 157.145 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 157.145 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 167 n n C1 C2 GOL sing 168 n n C1 H11 GOL sing 169 n n C1 H12 GOL sing 170 n n O1 HO1 GOL sing 171 n n C2 O2 GOL sing 172 n n C2 C3 GOL sing 173 n n C2 H2 GOL sing 174 n n O2 HO2 GOL sing 175 n n C3 O3 GOL sing 176 n n C3 H31 GOL sing 177 n n C3 H32 GOL sing 178 n n O3 HO3 GOL sing 179 n n # _atom_sites.entry_id 6FZ4 _atom_sites.fract_transf_matrix[1][1] 0.011253 _atom_sites.fract_transf_matrix[1][2] 0.006497 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012994 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006364 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 1 GOL GOL . C 2 GOL A 1 302 4 GOL GOL . D 2 GOL A 1 303 5 GOL GOL . E 2 GOL A 1 304 6 GOL GOL . F 2 GOL A 1 305 7 GOL GOL . G 3 SO4 A 1 306 1 SO4 SO4 . H 4 EC8 A 1 307 1 EC8 JP1 . I 5 CL A 1 308 1 CL CL . J 6 HOH A 1 401 78 HOH HOH . J 6 HOH A 2 402 153 HOH HOH . J 6 HOH A 3 403 170 HOH HOH . J 6 HOH A 4 404 200 HOH HOH . J 6 HOH A 5 405 175 HOH HOH . J 6 HOH A 6 406 39 HOH HOH . J 6 HOH A 7 407 132 HOH HOH . J 6 HOH A 8 408 57 HOH HOH . J 6 HOH A 9 409 144 HOH HOH . J 6 HOH A 10 410 41 HOH HOH . J 6 HOH A 11 411 38 HOH HOH . J 6 HOH A 12 412 102 HOH HOH . J 6 HOH A 13 413 26 HOH HOH . J 6 HOH A 14 414 146 HOH HOH . J 6 HOH A 15 415 87 HOH HOH . J 6 HOH A 16 416 15 HOH HOH . J 6 HOH A 17 417 185 HOH HOH . J 6 HOH A 18 418 40 HOH HOH . J 6 HOH A 19 419 145 HOH HOH . J 6 HOH A 20 420 22 HOH HOH . J 6 HOH A 21 421 189 HOH HOH . J 6 HOH A 22 422 11 HOH HOH . J 6 HOH A 23 423 105 HOH HOH . J 6 HOH A 24 424 61 HOH HOH . J 6 HOH A 25 425 96 HOH HOH . J 6 HOH A 26 426 182 HOH HOH . J 6 HOH A 27 427 108 HOH HOH . J 6 HOH A 28 428 1 HOH HOH . J 6 HOH A 29 429 19 HOH HOH . J 6 HOH A 30 430 12 HOH HOH . J 6 HOH A 31 431 114 HOH HOH . J 6 HOH A 32 432 115 HOH HOH . J 6 HOH A 33 433 29 HOH HOH . J 6 HOH A 34 434 5 HOH HOH . J 6 HOH A 35 435 42 HOH HOH . J 6 HOH A 36 436 85 HOH HOH . J 6 HOH A 37 437 7 HOH HOH . J 6 HOH A 38 438 20 HOH HOH . J 6 HOH A 39 439 74 HOH HOH . J 6 HOH A 40 440 16 HOH HOH . J 6 HOH A 41 441 187 HOH HOH . J 6 HOH A 42 442 10 HOH HOH . J 6 HOH A 43 443 75 HOH HOH . J 6 HOH A 44 444 207 HOH HOH . J 6 HOH A 45 445 25 HOH HOH . J 6 HOH A 46 446 69 HOH HOH . J 6 HOH A 47 447 157 HOH HOH . J 6 HOH A 48 448 66 HOH HOH . J 6 HOH A 49 449 50 HOH HOH . J 6 HOH A 50 450 176 HOH HOH . J 6 HOH A 51 451 4 HOH HOH . J 6 HOH A 52 452 54 HOH HOH . J 6 HOH A 53 453 8 HOH HOH . J 6 HOH A 54 454 51 HOH HOH . J 6 HOH A 55 455 27 HOH HOH . J 6 HOH A 56 456 100 HOH HOH . J 6 HOH A 57 457 9 HOH HOH . J 6 HOH A 58 458 17 HOH HOH . J 6 HOH A 59 459 58 HOH HOH . J 6 HOH A 60 460 109 HOH HOH . J 6 HOH A 61 461 139 HOH HOH . J 6 HOH A 62 462 205 HOH HOH . J 6 HOH A 63 463 21 HOH HOH . J 6 HOH A 64 464 125 HOH HOH . J 6 HOH A 65 465 28 HOH HOH . J 6 HOH A 66 466 14 HOH HOH . J 6 HOH A 67 467 3 HOH HOH . J 6 HOH A 68 468 202 HOH HOH . J 6 HOH A 69 469 177 HOH HOH . J 6 HOH A 70 470 52 HOH HOH . J 6 HOH A 71 471 160 HOH HOH . J 6 HOH A 72 472 13 HOH HOH . J 6 HOH A 73 473 195 HOH HOH . J 6 HOH A 74 474 24 HOH HOH . J 6 HOH A 75 475 148 HOH HOH . J 6 HOH A 76 476 46 HOH HOH . J 6 HOH A 77 477 79 HOH HOH . J 6 HOH A 78 478 167 HOH HOH . J 6 HOH A 79 479 31 HOH HOH . J 6 HOH A 80 480 188 HOH HOH . J 6 HOH A 81 481 35 HOH HOH . J 6 HOH A 82 482 76 HOH HOH . J 6 HOH A 83 483 33 HOH HOH . J 6 HOH A 84 484 45 HOH HOH . J 6 HOH A 85 485 143 HOH HOH . J 6 HOH A 86 486 49 HOH HOH . J 6 HOH A 87 487 70 HOH HOH . J 6 HOH A 88 488 168 HOH HOH . J 6 HOH A 89 489 152 HOH HOH . J 6 HOH A 90 490 198 HOH HOH . J 6 HOH A 91 491 201 HOH HOH . J 6 HOH A 92 492 155 HOH HOH . J 6 HOH A 93 493 186 HOH HOH . J 6 HOH A 94 494 90 HOH HOH . J 6 HOH A 95 495 129 HOH HOH . J 6 HOH A 96 496 101 HOH HOH . J 6 HOH A 97 497 184 HOH HOH . J 6 HOH A 98 498 181 HOH HOH . J 6 HOH A 99 499 135 HOH HOH . J 6 HOH A 100 500 34 HOH HOH . J 6 HOH A 101 501 158 HOH HOH . J 6 HOH A 102 502 64 HOH HOH . J 6 HOH A 103 503 190 HOH HOH . J 6 HOH A 104 504 88 HOH HOH . J 6 HOH A 105 505 82 HOH HOH . J 6 HOH A 106 506 121 HOH HOH . J 6 HOH A 107 507 113 HOH HOH . J 6 HOH A 108 508 147 HOH HOH . J 6 HOH A 109 509 206 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 30.906 24.413 61.728 1 82.73 ? C1 GOL 304 A 1 HETATM 2 O O1 GOL . . . E 2 30.085 23.595 60.922 1 85.29 ? O1 GOL 304 A 1 HETATM 3 C C2 GOL . . . E 2 31.534 25.495 60.871 1 84.02 ? C2 GOL 304 A 1 HETATM 4 O O2 GOL . . . E 2 30.499 26.182 60.202 1 104.76 ? O2 GOL 304 A 1 HETATM 5 C C3 GOL . . . E 2 32.335 26.443 61.758 1 81.13 ? C3 GOL 304 A 1 HETATM 6 O O3 GOL . . . E 2 33.662 25.987 61.909 1 82.8 ? O3 GOL 304 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #