data_6FZB # _model_server_result.job_id YWDTCkJ4bF3wylBJ-qdGjQ _model_server_result.datetime_utc '2024-11-23 08:46:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fzb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6FZB # _exptl.entry_id 6FZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FZB _cell.length_a 82.67 _cell.length_b 82.67 _cell.length_c 79.86 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,P 1 1 B,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 L N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 11 1_555 B SG CYS 11 B CYS 11 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 11 A CYS 11 1_555 B SG CYS 11 B CYS 11 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.856 ? metalc ? metalc1 A OD1 ASP 47 A ASP 47 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 A OD2 ASP 47 A ASP 47 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc3 A OD2 ASP 49 A ASP 49 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 A OD1 ASP 49 A ASP 49 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc5 A OE1 GLU 87 A GLU 87 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc6 D MG MG . A MG 302 1_555 F O2A ATP . A ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc7 D MG MG . A MG 302 1_555 F O2B ATP . A ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc8 D MG MG . A MG 302 1_555 F O2G ATP . A ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc9 D MG MG . A MG 302 1_555 P O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc10 E MG MG . A MG 303 1_555 F O2A ATP . A ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc11 B OD1 ASP 47 B ASP 47 1_555 L MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc12 B OD2 ASP 47 B ASP 47 1_555 M MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc13 B OD2 ASP 49 B ASP 49 1_555 L MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc14 B OD1 ASP 49 B ASP 49 1_555 M MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc15 B OE1 GLU 87 B GLU 87 1_555 M MG MG . B MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc16 L MG MG . B MG 302 1_555 N O1A ATP . B ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc17 L MG MG . B MG 302 1_555 N O1B ATP . B ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? metalc ? metalc18 L MG MG . B MG 302 1_555 N O2G ATP . B ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc19 L MG MG . B MG 302 1_555 Q O HOH . B HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc20 M MG MG . B MG 303 1_555 N O1A ATP . B ATP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6FZB _atom_sites.fract_transf_matrix[1][1] 0.012096 _atom_sites.fract_transf_matrix[1][2] 0.006984 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013968 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012522 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SRY A 1 301 304 SRY SRY . D 3 MG A 1 302 3263 MG MG . E 3 MG A 1 303 3264 MG MG . F 4 ATP A 1 304 3265 ATP ATP . G 5 CL A 1 305 1 CL CL . H 5 CL A 1 306 2 CL CL . I 6 PEG A 1 307 1 PEG PEG . J 6 PEG A 1 308 2 PEG PEG . K 2 SRY B 1 301 303 SRY SRY . L 3 MG B 1 302 3267 MG MG . M 3 MG B 1 303 3268 MG MG . N 4 ATP B 1 304 3269 ATP ATP . O 7 GOL B 1 305 1 GOL GOL . P 8 HOH A 1 401 145 HOH HOH . P 8 HOH A 2 402 82 HOH HOH . P 8 HOH A 3 403 22 HOH HOH . P 8 HOH A 4 404 19 HOH HOH . P 8 HOH A 5 405 64 HOH HOH . P 8 HOH A 6 406 195 HOH HOH . P 8 HOH A 7 407 12 HOH HOH . P 8 HOH A 8 408 221 HOH HOH . P 8 HOH A 9 409 291 HOH HOH . P 8 HOH A 10 410 257 HOH HOH . P 8 HOH A 11 411 109 HOH HOH . P 8 HOH A 12 412 99 HOH HOH . P 8 HOH A 13 413 146 HOH HOH . P 8 HOH A 14 414 70 HOH HOH . P 8 HOH A 15 415 201 HOH HOH . P 8 HOH A 16 416 289 HOH HOH . P 8 HOH A 17 417 203 HOH HOH . P 8 HOH A 18 418 128 HOH HOH . P 8 HOH A 19 419 214 HOH HOH . P 8 HOH A 20 420 251 HOH HOH . P 8 HOH A 21 421 108 HOH HOH . P 8 HOH A 22 422 72 HOH HOH . P 8 HOH A 23 423 77 HOH HOH . P 8 HOH A 24 424 41 HOH HOH . P 8 HOH A 25 425 4 HOH HOH . P 8 HOH A 26 426 115 HOH HOH . P 8 HOH A 27 427 153 HOH HOH . P 8 HOH A 28 428 37 HOH HOH . P 8 HOH A 29 429 217 HOH HOH . P 8 HOH A 30 430 240 HOH HOH . P 8 HOH A 31 431 46 HOH HOH . P 8 HOH A 32 432 211 HOH HOH . P 8 HOH A 33 433 55 HOH HOH . P 8 HOH A 34 434 202 HOH HOH . P 8 HOH A 35 435 39 HOH HOH . P 8 HOH A 36 436 29 HOH HOH . P 8 HOH A 37 437 212 HOH HOH . P 8 HOH A 38 438 40 HOH HOH . P 8 HOH A 39 439 258 HOH HOH . P 8 HOH A 40 440 7 HOH HOH . P 8 HOH A 41 441 300 HOH HOH . P 8 HOH A 42 442 66 HOH HOH . P 8 HOH A 43 443 206 HOH HOH . P 8 HOH A 44 444 15 HOH HOH . P 8 HOH A 45 445 247 HOH HOH . P 8 HOH A 46 446 23 HOH HOH . P 8 HOH A 47 447 139 HOH HOH . P 8 HOH A 48 448 35 HOH HOH . P 8 HOH A 49 449 154 HOH HOH . P 8 HOH A 50 450 53 HOH HOH . P 8 HOH A 51 451 127 HOH HOH . P 8 HOH A 52 452 286 HOH HOH . P 8 HOH A 53 453 51 HOH HOH . P 8 HOH A 54 454 223 HOH HOH . P 8 HOH A 55 455 74 HOH HOH . P 8 HOH A 56 456 218 HOH HOH . P 8 HOH A 57 457 62 HOH HOH . P 8 HOH A 58 458 156 HOH HOH . P 8 HOH A 59 459 34 HOH HOH . P 8 HOH A 60 460 56 HOH HOH . P 8 HOH A 61 461 47 HOH HOH . P 8 HOH A 62 462 63 HOH HOH . P 8 HOH A 63 463 17 HOH HOH . P 8 HOH A 64 464 36 HOH HOH . P 8 HOH A 65 465 86 HOH HOH . P 8 HOH A 66 466 266 HOH HOH . P 8 HOH A 67 467 205 HOH HOH . P 8 HOH A 68 468 45 HOH HOH . P 8 HOH A 69 469 191 HOH HOH . P 8 HOH A 70 470 103 HOH HOH . P 8 HOH A 71 471 118 HOH HOH . P 8 HOH A 72 472 173 HOH HOH . P 8 HOH A 73 473 27 HOH HOH . P 8 HOH A 74 474 259 HOH HOH . P 8 HOH A 75 475 9 HOH HOH . P 8 HOH A 76 476 21 HOH HOH . P 8 HOH A 77 477 71 HOH HOH . P 8 HOH A 78 478 94 HOH HOH . P 8 HOH A 79 479 79 HOH HOH . P 8 HOH A 80 480 2 HOH HOH . P 8 HOH A 81 481 102 HOH HOH . P 8 HOH A 82 482 150 HOH HOH . P 8 HOH A 83 483 250 HOH HOH . P 8 HOH A 84 484 248 HOH HOH . P 8 HOH A 85 485 106 HOH HOH . P 8 HOH A 86 486 254 HOH HOH . P 8 HOH A 87 487 209 HOH HOH . P 8 HOH A 88 488 261 HOH HOH . P 8 HOH A 89 489 200 HOH HOH . P 8 HOH A 90 490 198 HOH HOH . P 8 HOH A 91 491 90 HOH HOH . P 8 HOH A 92 492 126 HOH HOH . P 8 HOH A 93 493 216 HOH HOH . P 8 HOH A 94 494 194 HOH HOH . P 8 HOH A 95 495 246 HOH HOH . P 8 HOH A 96 496 192 HOH HOH . Q 8 HOH B 1 401 120 HOH HOH . Q 8 HOH B 2 402 295 HOH HOH . Q 8 HOH B 3 403 296 HOH HOH . Q 8 HOH B 4 404 91 HOH HOH . Q 8 HOH B 5 405 10 HOH HOH . Q 8 HOH B 6 406 88 HOH HOH . Q 8 HOH B 7 407 165 HOH HOH . Q 8 HOH B 8 408 54 HOH HOH . Q 8 HOH B 9 409 196 HOH HOH . Q 8 HOH B 10 410 242 HOH HOH . Q 8 HOH B 11 411 107 HOH HOH . Q 8 HOH B 12 412 93 HOH HOH . Q 8 HOH B 13 413 269 HOH HOH . Q 8 HOH B 14 414 138 HOH HOH . Q 8 HOH B 15 415 96 HOH HOH . Q 8 HOH B 16 416 97 HOH HOH . Q 8 HOH B 17 417 233 HOH HOH . Q 8 HOH B 18 418 285 HOH HOH . Q 8 HOH B 19 419 59 HOH HOH . Q 8 HOH B 20 420 3 HOH HOH . Q 8 HOH B 21 421 76 HOH HOH . Q 8 HOH B 22 422 67 HOH HOH . Q 8 HOH B 23 423 14 HOH HOH . Q 8 HOH B 24 424 11 HOH HOH . Q 8 HOH B 25 425 284 HOH HOH . Q 8 HOH B 26 426 117 HOH HOH . Q 8 HOH B 27 427 277 HOH HOH . Q 8 HOH B 28 428 75 HOH HOH . Q 8 HOH B 29 429 38 HOH HOH . Q 8 HOH B 30 430 6 HOH HOH . Q 8 HOH B 31 431 25 HOH HOH . Q 8 HOH B 32 432 61 HOH HOH . Q 8 HOH B 33 433 57 HOH HOH . Q 8 HOH B 34 434 294 HOH HOH . Q 8 HOH B 35 435 20 HOH HOH . Q 8 HOH B 36 436 121 HOH HOH . Q 8 HOH B 37 437 140 HOH HOH . Q 8 HOH B 38 438 73 HOH HOH . Q 8 HOH B 39 439 159 HOH HOH . Q 8 HOH B 40 440 32 HOH HOH . Q 8 HOH B 41 441 123 HOH HOH . Q 8 HOH B 42 442 68 HOH HOH . Q 8 HOH B 43 443 283 HOH HOH . Q 8 HOH B 44 444 279 HOH HOH . Q 8 HOH B 45 445 44 HOH HOH . Q 8 HOH B 46 446 265 HOH HOH . Q 8 HOH B 47 447 30 HOH HOH . Q 8 HOH B 48 448 31 HOH HOH . Q 8 HOH B 49 449 249 HOH HOH . Q 8 HOH B 50 450 26 HOH HOH . Q 8 HOH B 51 451 204 HOH HOH . Q 8 HOH B 52 452 297 HOH HOH . Q 8 HOH B 53 453 48 HOH HOH . Q 8 HOH B 54 454 69 HOH HOH . Q 8 HOH B 55 455 85 HOH HOH . Q 8 HOH B 56 456 110 HOH HOH . Q 8 HOH B 57 457 100 HOH HOH . Q 8 HOH B 58 458 52 HOH HOH . Q 8 HOH B 59 459 5 HOH HOH . Q 8 HOH B 60 460 281 HOH HOH . Q 8 HOH B 61 461 24 HOH HOH . Q 8 HOH B 62 462 1 HOH HOH . Q 8 HOH B 63 463 270 HOH HOH . Q 8 HOH B 64 464 28 HOH HOH . Q 8 HOH B 65 465 81 HOH HOH . Q 8 HOH B 66 466 113 HOH HOH . Q 8 HOH B 67 467 8 HOH HOH . Q 8 HOH B 68 468 83 HOH HOH . Q 8 HOH B 69 469 234 HOH HOH . Q 8 HOH B 70 470 18 HOH HOH . Q 8 HOH B 71 471 16 HOH HOH . Q 8 HOH B 72 472 227 HOH HOH . Q 8 HOH B 73 473 13 HOH HOH . Q 8 HOH B 74 474 42 HOH HOH . Q 8 HOH B 75 475 148 HOH HOH . Q 8 HOH B 76 476 237 HOH HOH . Q 8 HOH B 77 477 282 HOH HOH . Q 8 HOH B 78 478 111 HOH HOH . Q 8 HOH B 79 479 33 HOH HOH . Q 8 HOH B 80 480 230 HOH HOH . Q 8 HOH B 81 481 239 HOH HOH . Q 8 HOH B 82 482 122 HOH HOH . Q 8 HOH B 83 483 298 HOH HOH . Q 8 HOH B 84 484 228 HOH HOH . Q 8 HOH B 85 485 105 HOH HOH . Q 8 HOH B 86 486 95 HOH HOH . Q 8 HOH B 87 487 130 HOH HOH . Q 8 HOH B 88 488 293 HOH HOH . Q 8 HOH B 89 489 190 HOH HOH . Q 8 HOH B 90 490 238 HOH HOH . Q 8 HOH B 91 491 116 HOH HOH . Q 8 HOH B 92 492 147 HOH HOH . Q 8 HOH B 93 493 210 HOH HOH . Q 8 HOH B 94 494 275 HOH HOH . Q 8 HOH B 95 495 225 HOH HOH . Q 8 HOH B 96 496 299 HOH HOH . Q 8 HOH B 97 497 193 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -15.09 _atom_site.Cartn_y 86.784 _atom_site.Cartn_z 73.365 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #