data_6FZO # _model_server_result.job_id VDIH1vbDNSlJW80NSZomsw _model_server_result.datetime_utc '2024-12-02 03:03:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fzo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":204}' # _entry.id 6FZO # _exptl.entry_id 6FZO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.83 _cell.angle_gamma 90 _cell.entry_id 6FZO _cell.length_a 41.31 _cell.length_b 77.32 _cell.length_c 79.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FZO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 S N N ? 3 T N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6FZO _atom_sites.fract_transf_matrix[1][1] 0.024207 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001196 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 201 15 SO4 SO4 . F 2 SO4 A 1 202 16 SO4 SO4 . G 3 EDO A 1 203 3 EDO EDO . H 3 EDO A 1 204 6 EDO EDO . I 4 CL A 1 205 4 CL CL . J 4 CL A 1 206 10 CL CL . K 2 SO4 B 1 201 1 SO4 SO4 . L 2 SO4 B 1 202 4 SO4 SO4 . M 2 SO4 B 1 203 13 SO4 SO4 . N 2 SO4 B 1 204 18 SO4 SO4 . O 4 CL B 1 205 1 CL CL . P 4 CL B 1 206 3 CL CL . Q 2 SO4 C 1 201 14 SO4 SO4 . R 2 SO4 C 1 202 17 SO4 SO4 . S 3 EDO C 1 203 5 EDO EDO . T 3 EDO C 1 204 7 EDO EDO . U 4 CL C 1 205 2 CL CL . V 2 SO4 D 1 201 19 SO4 SO4 . W 4 CL D 1 202 8 CL CL . X 5 HOH A 1 301 242 HOH HOH . X 5 HOH A 2 302 169 HOH HOH . X 5 HOH A 3 303 245 HOH HOH . X 5 HOH A 4 304 60 HOH HOH . X 5 HOH A 5 305 240 HOH HOH . X 5 HOH A 6 306 244 HOH HOH . X 5 HOH A 7 307 246 HOH HOH . X 5 HOH A 8 308 148 HOH HOH . X 5 HOH A 9 309 198 HOH HOH . X 5 HOH A 10 310 166 HOH HOH . X 5 HOH A 11 311 54 HOH HOH . X 5 HOH A 12 312 94 HOH HOH . X 5 HOH A 13 313 196 HOH HOH . X 5 HOH A 14 314 241 HOH HOH . X 5 HOH A 15 315 226 HOH HOH . X 5 HOH A 16 316 124 HOH HOH . X 5 HOH A 17 317 97 HOH HOH . X 5 HOH A 18 318 59 HOH HOH . X 5 HOH A 19 319 194 HOH HOH . X 5 HOH A 20 320 140 HOH HOH . X 5 HOH A 21 321 200 HOH HOH . X 5 HOH A 22 322 121 HOH HOH . X 5 HOH A 23 323 266 HOH HOH . X 5 HOH A 24 324 159 HOH HOH . X 5 HOH A 25 325 125 HOH HOH . X 5 HOH A 26 326 145 HOH HOH . X 5 HOH A 27 327 230 HOH HOH . X 5 HOH A 28 328 177 HOH HOH . Y 5 HOH B 1 301 250 HOH HOH . Y 5 HOH B 2 302 252 HOH HOH . Y 5 HOH B 3 303 75 HOH HOH . Y 5 HOH B 4 304 16 HOH HOH . Y 5 HOH B 5 305 215 HOH HOH . Y 5 HOH B 6 306 3 HOH HOH . Y 5 HOH B 7 307 151 HOH HOH . Y 5 HOH B 8 308 238 HOH HOH . Y 5 HOH B 9 309 92 HOH HOH . Y 5 HOH B 10 310 259 HOH HOH . Y 5 HOH B 11 311 247 HOH HOH . Y 5 HOH B 12 312 26 HOH HOH . Y 5 HOH B 13 313 142 HOH HOH . Y 5 HOH B 14 314 254 HOH HOH . Y 5 HOH B 15 315 135 HOH HOH . Y 5 HOH B 16 316 19 HOH HOH . Y 5 HOH B 17 317 132 HOH HOH . Y 5 HOH B 18 318 25 HOH HOH . Y 5 HOH B 19 319 17 HOH HOH . Y 5 HOH B 20 320 51 HOH HOH . Y 5 HOH B 21 321 24 HOH HOH . Y 5 HOH B 22 322 264 HOH HOH . Y 5 HOH B 23 323 100 HOH HOH . Y 5 HOH B 24 324 65 HOH HOH . Y 5 HOH B 25 325 66 HOH HOH . Y 5 HOH B 26 326 189 HOH HOH . Y 5 HOH B 27 327 101 HOH HOH . Y 5 HOH B 28 328 251 HOH HOH . Y 5 HOH B 29 329 205 HOH HOH . Y 5 HOH B 30 330 237 HOH HOH . Z 5 HOH C 1 301 30 HOH HOH . Z 5 HOH C 2 302 208 HOH HOH . Z 5 HOH C 3 303 173 HOH HOH . Z 5 HOH C 4 304 211 HOH HOH . Z 5 HOH C 5 305 137 HOH HOH . Z 5 HOH C 6 306 181 HOH HOH . Z 5 HOH C 7 307 256 HOH HOH . Z 5 HOH C 8 308 222 HOH HOH . Z 5 HOH C 9 309 219 HOH HOH . Z 5 HOH C 10 310 232 HOH HOH . Z 5 HOH C 11 311 4 HOH HOH . Z 5 HOH C 12 312 233 HOH HOH . Z 5 HOH C 13 313 183 HOH HOH . Z 5 HOH C 14 314 260 HOH HOH . Z 5 HOH C 15 315 63 HOH HOH . Z 5 HOH C 16 316 79 HOH HOH . Z 5 HOH C 17 317 6 HOH HOH . Z 5 HOH C 18 318 77 HOH HOH . Z 5 HOH C 19 319 29 HOH HOH . Z 5 HOH C 20 320 265 HOH HOH . Z 5 HOH C 21 321 80 HOH HOH . Z 5 HOH C 22 322 255 HOH HOH . Z 5 HOH C 23 323 195 HOH HOH . Z 5 HOH C 24 324 112 HOH HOH . Z 5 HOH C 25 325 161 HOH HOH . Z 5 HOH C 26 326 248 HOH HOH . Z 5 HOH C 27 327 170 HOH HOH . AA 5 HOH D 1 301 262 HOH HOH . AA 5 HOH D 2 302 50 HOH HOH . AA 5 HOH D 3 303 47 HOH HOH . AA 5 HOH D 4 304 52 HOH HOH . AA 5 HOH D 5 305 263 HOH HOH . AA 5 HOH D 6 306 249 HOH HOH . AA 5 HOH D 7 307 91 HOH HOH . AA 5 HOH D 8 308 175 HOH HOH . AA 5 HOH D 9 309 171 HOH HOH . AA 5 HOH D 10 310 257 HOH HOH . AA 5 HOH D 11 311 258 HOH HOH . AA 5 HOH D 12 312 172 HOH HOH . AA 5 HOH D 13 313 120 HOH HOH . AA 5 HOH D 14 314 119 HOH HOH . AA 5 HOH D 15 315 128 HOH HOH . AA 5 HOH D 16 316 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 3 42.017 24.621 11.021 1 48.32 ? C1 EDO 204 A 1 HETATM 2 O O1 EDO . . . H 3 42.275 24.62 9.621 1 44.17 ? O1 EDO 204 A 1 HETATM 3 C C2 EDO . . . H 3 43.348 24.87 11.711 1 49.84 ? C2 EDO 204 A 1 HETATM 4 O O2 EDO . . . H 3 43.181 25.954 12.621 1 54.55 ? O2 EDO 204 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 444 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #