data_6G0O # _model_server_result.job_id Xih-IChk8GvMlPdw2BPScw _model_server_result.datetime_utc '2024-10-19 16:37:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g0o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6G0O # _exptl.entry_id 6G0O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G0O _cell.length_a 48.864 _cell.length_b 52.797 _cell.length_c 53.317 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G0O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C PRO 3 B PRO 1029 1_555 B N ALY 4 B ALY 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 B C ALY 4 B ALY 1030 1_555 B N GLY 5 B GLY 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale3 B C ILE 6 B ILE 1032 1_555 B N ALY 7 B ALY 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale4 B C ALY 7 B ALY 1033 1_555 B N GLN 8 B GLN 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 111 n n C1 C2 EDO sing 112 n n C1 H11 EDO sing 113 n n C1 H12 EDO sing 114 n n O1 HO1 EDO sing 115 n n C2 O2 EDO sing 116 n n C2 H21 EDO sing 117 n n C2 H22 EDO sing 118 n n O2 HO2 EDO sing 119 n n # _atom_sites.entry_id 6G0O _atom_sites.fract_transf_matrix[1][1] 0.020465 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 201 1 EDO EDO . D 3 EDO A 1 202 2 EDO EDO . E 3 EDO A 1 203 3 EDO EDO . F 4 HOH A 1 301 125 HOH HOH . F 4 HOH A 2 302 147 HOH HOH . F 4 HOH A 3 303 161 HOH HOH . F 4 HOH A 4 304 85 HOH HOH . F 4 HOH A 5 305 4 HOH HOH . F 4 HOH A 6 306 19 HOH HOH . F 4 HOH A 7 307 118 HOH HOH . F 4 HOH A 8 308 55 HOH HOH . F 4 HOH A 9 309 11 HOH HOH . F 4 HOH A 10 310 57 HOH HOH . F 4 HOH A 11 311 182 HOH HOH . F 4 HOH A 12 312 217 HOH HOH . F 4 HOH A 13 313 107 HOH HOH . F 4 HOH A 14 314 105 HOH HOH . F 4 HOH A 15 315 151 HOH HOH . F 4 HOH A 16 316 124 HOH HOH . F 4 HOH A 17 317 219 HOH HOH . F 4 HOH A 18 318 68 HOH HOH . F 4 HOH A 19 319 95 HOH HOH . F 4 HOH A 20 320 157 HOH HOH . F 4 HOH A 21 321 23 HOH HOH . F 4 HOH A 22 322 59 HOH HOH . F 4 HOH A 23 323 160 HOH HOH . F 4 HOH A 24 324 168 HOH HOH . F 4 HOH A 25 325 201 HOH HOH . F 4 HOH A 26 326 183 HOH HOH . F 4 HOH A 27 327 15 HOH HOH . F 4 HOH A 28 328 12 HOH HOH . F 4 HOH A 29 329 34 HOH HOH . F 4 HOH A 30 330 20 HOH HOH . F 4 HOH A 31 331 176 HOH HOH . F 4 HOH A 32 332 87 HOH HOH . F 4 HOH A 33 333 40 HOH HOH . F 4 HOH A 34 334 13 HOH HOH . F 4 HOH A 35 335 60 HOH HOH . F 4 HOH A 36 336 169 HOH HOH . F 4 HOH A 37 337 112 HOH HOH . F 4 HOH A 38 338 38 HOH HOH . F 4 HOH A 39 339 67 HOH HOH . F 4 HOH A 40 340 26 HOH HOH . F 4 HOH A 41 341 17 HOH HOH . F 4 HOH A 42 342 6 HOH HOH . F 4 HOH A 43 343 47 HOH HOH . F 4 HOH A 44 344 121 HOH HOH . F 4 HOH A 45 345 218 HOH HOH . F 4 HOH A 46 346 54 HOH HOH . F 4 HOH A 47 347 72 HOH HOH . F 4 HOH A 48 348 110 HOH HOH . F 4 HOH A 49 349 28 HOH HOH . F 4 HOH A 50 350 24 HOH HOH . F 4 HOH A 51 351 27 HOH HOH . F 4 HOH A 52 352 63 HOH HOH . F 4 HOH A 53 353 25 HOH HOH . F 4 HOH A 54 354 18 HOH HOH . F 4 HOH A 55 355 66 HOH HOH . F 4 HOH A 56 356 35 HOH HOH . F 4 HOH A 57 357 197 HOH HOH . F 4 HOH A 58 358 71 HOH HOH . F 4 HOH A 59 359 9 HOH HOH . F 4 HOH A 60 360 144 HOH HOH . F 4 HOH A 61 361 120 HOH HOH . F 4 HOH A 62 362 202 HOH HOH . F 4 HOH A 63 363 79 HOH HOH . F 4 HOH A 64 364 142 HOH HOH . F 4 HOH A 65 365 93 HOH HOH . F 4 HOH A 66 366 208 HOH HOH . F 4 HOH A 67 367 181 HOH HOH . F 4 HOH A 68 368 10 HOH HOH . F 4 HOH A 69 369 37 HOH HOH . F 4 HOH A 70 370 123 HOH HOH . F 4 HOH A 71 371 96 HOH HOH . F 4 HOH A 72 372 129 HOH HOH . F 4 HOH A 73 373 29 HOH HOH . F 4 HOH A 74 374 31 HOH HOH . F 4 HOH A 75 375 162 HOH HOH . F 4 HOH A 76 376 114 HOH HOH . F 4 HOH A 77 377 7 HOH HOH . F 4 HOH A 78 378 39 HOH HOH . F 4 HOH A 79 379 86 HOH HOH . F 4 HOH A 80 380 104 HOH HOH . F 4 HOH A 81 381 8 HOH HOH . F 4 HOH A 82 382 3 HOH HOH . F 4 HOH A 83 383 46 HOH HOH . F 4 HOH A 84 384 180 HOH HOH . F 4 HOH A 85 385 64 HOH HOH . F 4 HOH A 86 386 42 HOH HOH . F 4 HOH A 87 387 78 HOH HOH . F 4 HOH A 88 388 189 HOH HOH . F 4 HOH A 89 389 177 HOH HOH . F 4 HOH A 90 390 188 HOH HOH . F 4 HOH A 91 391 186 HOH HOH . F 4 HOH A 92 392 154 HOH HOH . F 4 HOH A 93 393 82 HOH HOH . F 4 HOH A 94 394 150 HOH HOH . F 4 HOH A 95 395 53 HOH HOH . F 4 HOH A 96 396 48 HOH HOH . F 4 HOH A 97 397 33 HOH HOH . F 4 HOH A 98 398 50 HOH HOH . F 4 HOH A 99 399 94 HOH HOH . F 4 HOH A 100 400 137 HOH HOH . F 4 HOH A 101 401 207 HOH HOH . F 4 HOH A 102 402 43 HOH HOH . F 4 HOH A 103 403 158 HOH HOH . F 4 HOH A 104 404 106 HOH HOH . F 4 HOH A 105 405 88 HOH HOH . F 4 HOH A 106 406 69 HOH HOH . F 4 HOH A 107 407 61 HOH HOH . F 4 HOH A 108 408 44 HOH HOH . F 4 HOH A 109 409 131 HOH HOH . F 4 HOH A 110 410 185 HOH HOH . F 4 HOH A 111 411 164 HOH HOH . F 4 HOH A 112 412 172 HOH HOH . F 4 HOH A 113 413 56 HOH HOH . F 4 HOH A 114 414 204 HOH HOH . F 4 HOH A 115 415 206 HOH HOH . F 4 HOH A 116 416 173 HOH HOH . F 4 HOH A 117 417 136 HOH HOH . F 4 HOH A 118 418 108 HOH HOH . F 4 HOH A 119 419 143 HOH HOH . F 4 HOH A 120 420 213 HOH HOH . F 4 HOH A 121 421 97 HOH HOH . F 4 HOH A 122 422 198 HOH HOH . F 4 HOH A 123 423 153 HOH HOH . F 4 HOH A 124 424 141 HOH HOH . F 4 HOH A 125 425 196 HOH HOH . F 4 HOH A 126 426 113 HOH HOH . F 4 HOH A 127 427 115 HOH HOH . F 4 HOH A 128 428 211 HOH HOH . F 4 HOH A 129 429 156 HOH HOH . F 4 HOH A 130 430 116 HOH HOH . F 4 HOH A 131 431 102 HOH HOH . F 4 HOH A 132 432 133 HOH HOH . F 4 HOH A 133 433 134 HOH HOH . F 4 HOH A 134 434 191 HOH HOH . F 4 HOH A 135 435 184 HOH HOH . F 4 HOH A 136 436 155 HOH HOH . F 4 HOH A 137 437 140 HOH HOH . F 4 HOH A 138 438 117 HOH HOH . F 4 HOH A 139 439 84 HOH HOH . F 4 HOH A 140 440 175 HOH HOH . F 4 HOH A 141 441 49 HOH HOH . F 4 HOH A 142 442 152 HOH HOH . F 4 HOH A 143 443 187 HOH HOH . F 4 HOH A 144 444 89 HOH HOH . F 4 HOH A 145 445 98 HOH HOH . F 4 HOH A 146 446 174 HOH HOH . F 4 HOH A 147 447 193 HOH HOH . F 4 HOH A 148 448 203 HOH HOH . F 4 HOH A 149 449 179 HOH HOH . F 4 HOH A 150 450 190 HOH HOH . F 4 HOH A 151 451 170 HOH HOH . F 4 HOH A 152 452 76 HOH HOH . F 4 HOH A 153 453 148 HOH HOH . F 4 HOH A 154 454 192 HOH HOH . F 4 HOH A 155 455 178 HOH HOH . G 4 HOH B 1 1101 14 HOH HOH . G 4 HOH B 2 1102 45 HOH HOH . G 4 HOH B 3 1103 212 HOH HOH . G 4 HOH B 4 1104 209 HOH HOH . G 4 HOH B 5 1105 200 HOH HOH . G 4 HOH B 6 1106 205 HOH HOH . G 4 HOH B 7 1107 210 HOH HOH . G 4 HOH B 8 1108 83 HOH HOH . G 4 HOH B 9 1109 126 HOH HOH . G 4 HOH B 10 1110 216 HOH HOH . G 4 HOH B 11 1111 199 HOH HOH . G 4 HOH B 12 1112 214 HOH HOH . G 4 HOH B 13 1113 215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 65.082 14.913 3.496 1 22.11 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . D 3 64.195 13.817 3.686 1 19.84 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . D 3 66.248 14.927 4.479 1 21.84 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . D 3 67.099 13.795 4.245 1 18.4 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #