data_6G0S # _model_server_result.job_id w8X2qfaDMqNDQO7zXS3YEw _model_server_result.datetime_utc '2024-11-02 20:21:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 6G0S # _exptl.entry_id 6G0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G0S _cell.length_a 42.393 _cell.length_b 59.376 _cell.length_c 106.017 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C LEU 3 D LEU 271 1_555 B N ALY 4 D ALY 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 B C ALY 4 D ALY 272 1_555 B N VAL 5 D VAL 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 B C LEU 6 D LEU 274 1_555 B N ALY 7 D ALY 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 B C ALY 7 D ALY 275 1_555 B N LYS 8 D LYS 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 111 n n C1 C2 EDO sing 112 n n C1 H11 EDO sing 113 n n C1 H12 EDO sing 114 n n O1 HO1 EDO sing 115 n n C2 O2 EDO sing 116 n n C2 H21 EDO sing 117 n n C2 H22 EDO sing 118 n n O2 HO2 EDO sing 119 n n # _atom_sites.entry_id 6G0S _atom_sites.fract_transf_matrix[1][1] 0.023589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016842 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 EDO A 1 201 1 EDO EDO . E 3 EDO A 1 202 3 EDO EDO . F 3 EDO B 1 201 2 EDO EDO . G 4 HOH A 1 301 213 HOH HOH . G 4 HOH A 2 302 263 HOH HOH . G 4 HOH A 3 303 247 HOH HOH . G 4 HOH A 4 304 90 HOH HOH . G 4 HOH A 5 305 297 HOH HOH . G 4 HOH A 6 306 1 HOH HOH . G 4 HOH A 7 307 227 HOH HOH . G 4 HOH A 8 308 43 HOH HOH . G 4 HOH A 9 309 142 HOH HOH . G 4 HOH A 10 310 11 HOH HOH . G 4 HOH A 11 311 320 HOH HOH . G 4 HOH A 12 312 92 HOH HOH . G 4 HOH A 13 313 94 HOH HOH . G 4 HOH A 14 314 60 HOH HOH . G 4 HOH A 15 315 82 HOH HOH . G 4 HOH A 16 316 265 HOH HOH . G 4 HOH A 17 317 155 HOH HOH . G 4 HOH A 18 318 105 HOH HOH . G 4 HOH A 19 319 39 HOH HOH . G 4 HOH A 20 320 20 HOH HOH . G 4 HOH A 21 321 96 HOH HOH . G 4 HOH A 22 322 2 HOH HOH . G 4 HOH A 23 323 156 HOH HOH . G 4 HOH A 24 324 202 HOH HOH . G 4 HOH A 25 325 14 HOH HOH . G 4 HOH A 26 326 139 HOH HOH . G 4 HOH A 27 327 167 HOH HOH . G 4 HOH A 28 328 150 HOH HOH . G 4 HOH A 29 329 10 HOH HOH . G 4 HOH A 30 330 54 HOH HOH . G 4 HOH A 31 331 5 HOH HOH . G 4 HOH A 32 332 211 HOH HOH . G 4 HOH A 33 333 7 HOH HOH . G 4 HOH A 34 334 107 HOH HOH . G 4 HOH A 35 335 253 HOH HOH . G 4 HOH A 36 336 95 HOH HOH . G 4 HOH A 37 337 309 HOH HOH . G 4 HOH A 38 338 67 HOH HOH . G 4 HOH A 39 339 177 HOH HOH . G 4 HOH A 40 340 193 HOH HOH . G 4 HOH A 41 341 69 HOH HOH . G 4 HOH A 42 342 289 HOH HOH . G 4 HOH A 43 343 210 HOH HOH . G 4 HOH A 44 344 245 HOH HOH . G 4 HOH A 45 345 170 HOH HOH . G 4 HOH A 46 346 178 HOH HOH . G 4 HOH A 47 347 46 HOH HOH . G 4 HOH A 48 348 41 HOH HOH . G 4 HOH A 49 349 179 HOH HOH . G 4 HOH A 50 350 214 HOH HOH . G 4 HOH A 51 351 15 HOH HOH . G 4 HOH A 52 352 40 HOH HOH . G 4 HOH A 53 353 70 HOH HOH . G 4 HOH A 54 354 57 HOH HOH . G 4 HOH A 55 355 116 HOH HOH . G 4 HOH A 56 356 240 HOH HOH . G 4 HOH A 57 357 24 HOH HOH . G 4 HOH A 58 358 149 HOH HOH . G 4 HOH A 59 359 195 HOH HOH . G 4 HOH A 60 360 98 HOH HOH . G 4 HOH A 61 361 12 HOH HOH . G 4 HOH A 62 362 230 HOH HOH . G 4 HOH A 63 363 32 HOH HOH . G 4 HOH A 64 364 49 HOH HOH . G 4 HOH A 65 365 175 HOH HOH . G 4 HOH A 66 366 271 HOH HOH . G 4 HOH A 67 367 264 HOH HOH . G 4 HOH A 68 368 259 HOH HOH . G 4 HOH A 69 369 189 HOH HOH . G 4 HOH A 70 370 17 HOH HOH . G 4 HOH A 71 371 25 HOH HOH . G 4 HOH A 72 372 110 HOH HOH . G 4 HOH A 73 373 117 HOH HOH . G 4 HOH A 74 374 248 HOH HOH . G 4 HOH A 75 375 183 HOH HOH . G 4 HOH A 76 376 42 HOH HOH . G 4 HOH A 77 377 260 HOH HOH . G 4 HOH A 78 378 158 HOH HOH . G 4 HOH A 79 379 251 HOH HOH . G 4 HOH A 80 380 301 HOH HOH . G 4 HOH A 81 381 252 HOH HOH . G 4 HOH A 82 382 74 HOH HOH . G 4 HOH A 83 383 207 HOH HOH . G 4 HOH A 84 384 111 HOH HOH . G 4 HOH A 85 385 153 HOH HOH . G 4 HOH A 86 386 316 HOH HOH . G 4 HOH A 87 387 319 HOH HOH . G 4 HOH A 88 388 180 HOH HOH . G 4 HOH A 89 389 47 HOH HOH . G 4 HOH A 90 390 35 HOH HOH . G 4 HOH A 91 391 269 HOH HOH . G 4 HOH A 92 392 99 HOH HOH . G 4 HOH A 93 393 270 HOH HOH . G 4 HOH A 94 394 229 HOH HOH . G 4 HOH A 95 395 267 HOH HOH . G 4 HOH A 96 396 291 HOH HOH . G 4 HOH A 97 397 182 HOH HOH . G 4 HOH A 98 398 97 HOH HOH . G 4 HOH A 99 399 305 HOH HOH . G 4 HOH A 100 400 133 HOH HOH . G 4 HOH A 101 401 169 HOH HOH . G 4 HOH A 102 402 266 HOH HOH . G 4 HOH A 103 403 171 HOH HOH . G 4 HOH A 104 404 244 HOH HOH . G 4 HOH A 105 405 258 HOH HOH . G 4 HOH A 106 406 204 HOH HOH . G 4 HOH A 107 407 268 HOH HOH . G 4 HOH A 108 408 317 HOH HOH . G 4 HOH A 109 409 140 HOH HOH . G 4 HOH A 110 410 144 HOH HOH . G 4 HOH A 111 411 243 HOH HOH . G 4 HOH A 112 412 249 HOH HOH . G 4 HOH A 113 413 83 HOH HOH . G 4 HOH A 114 414 255 HOH HOH . G 4 HOH A 115 415 254 HOH HOH . G 4 HOH A 116 416 176 HOH HOH . G 4 HOH A 117 417 257 HOH HOH . G 4 HOH A 118 418 138 HOH HOH . G 4 HOH A 119 419 250 HOH HOH . H 4 HOH D 1 301 172 HOH HOH . H 4 HOH D 2 302 37 HOH HOH . H 4 HOH D 3 303 315 HOH HOH . H 4 HOH D 4 304 314 HOH HOH . H 4 HOH D 5 305 72 HOH HOH . H 4 HOH D 6 306 159 HOH HOH . H 4 HOH D 7 307 75 HOH HOH . H 4 HOH D 8 308 203 HOH HOH . H 4 HOH D 9 309 128 HOH HOH . H 4 HOH D 10 310 299 HOH HOH . H 4 HOH D 11 311 306 HOH HOH . H 4 HOH D 12 312 322 HOH HOH . H 4 HOH D 13 313 209 HOH HOH . I 4 HOH B 1 301 206 HOH HOH . I 4 HOH B 2 302 89 HOH HOH . I 4 HOH B 3 303 191 HOH HOH . I 4 HOH B 4 304 302 HOH HOH . I 4 HOH B 5 305 38 HOH HOH . I 4 HOH B 6 306 8 HOH HOH . I 4 HOH B 7 307 313 HOH HOH . I 4 HOH B 8 308 324 HOH HOH . I 4 HOH B 9 309 28 HOH HOH . I 4 HOH B 10 310 318 HOH HOH . I 4 HOH B 11 311 136 HOH HOH . I 4 HOH B 12 312 296 HOH HOH . I 4 HOH B 13 313 168 HOH HOH . I 4 HOH B 14 314 31 HOH HOH . I 4 HOH B 15 315 283 HOH HOH . I 4 HOH B 16 316 86 HOH HOH . I 4 HOH B 17 317 303 HOH HOH . I 4 HOH B 18 318 323 HOH HOH . I 4 HOH B 19 319 273 HOH HOH . I 4 HOH B 20 320 16 HOH HOH . I 4 HOH B 21 321 53 HOH HOH . I 4 HOH B 22 322 23 HOH HOH . I 4 HOH B 23 323 190 HOH HOH . I 4 HOH B 24 324 93 HOH HOH . I 4 HOH B 25 325 145 HOH HOH . I 4 HOH B 26 326 278 HOH HOH . I 4 HOH B 27 327 22 HOH HOH . I 4 HOH B 28 328 285 HOH HOH . I 4 HOH B 29 329 287 HOH HOH . I 4 HOH B 30 330 27 HOH HOH . I 4 HOH B 31 331 29 HOH HOH . I 4 HOH B 32 332 312 HOH HOH . I 4 HOH B 33 333 109 HOH HOH . I 4 HOH B 34 334 277 HOH HOH . I 4 HOH B 35 335 4 HOH HOH . I 4 HOH B 36 336 300 HOH HOH . I 4 HOH B 37 337 162 HOH HOH . I 4 HOH B 38 338 106 HOH HOH . I 4 HOH B 39 339 65 HOH HOH . I 4 HOH B 40 340 281 HOH HOH . I 4 HOH B 41 341 282 HOH HOH . I 4 HOH B 42 342 276 HOH HOH . I 4 HOH B 43 343 51 HOH HOH . I 4 HOH B 44 344 137 HOH HOH . I 4 HOH B 45 345 181 HOH HOH . I 4 HOH B 46 346 220 HOH HOH . I 4 HOH B 47 347 76 HOH HOH . I 4 HOH B 48 348 104 HOH HOH . I 4 HOH B 49 349 9 HOH HOH . I 4 HOH B 50 350 113 HOH HOH . I 4 HOH B 51 351 298 HOH HOH . I 4 HOH B 52 352 6 HOH HOH . I 4 HOH B 53 353 275 HOH HOH . I 4 HOH B 54 354 160 HOH HOH . I 4 HOH B 55 355 19 HOH HOH . I 4 HOH B 56 356 63 HOH HOH . I 4 HOH B 57 357 34 HOH HOH . I 4 HOH B 58 358 272 HOH HOH . I 4 HOH B 59 359 80 HOH HOH . I 4 HOH B 60 360 304 HOH HOH . I 4 HOH B 61 361 45 HOH HOH . I 4 HOH B 62 362 292 HOH HOH . I 4 HOH B 63 363 233 HOH HOH . I 4 HOH B 64 364 141 HOH HOH . I 4 HOH B 65 365 115 HOH HOH . I 4 HOH B 66 366 129 HOH HOH . I 4 HOH B 67 367 295 HOH HOH . I 4 HOH B 68 368 286 HOH HOH . I 4 HOH B 69 369 288 HOH HOH . I 4 HOH B 70 370 66 HOH HOH . I 4 HOH B 71 371 163 HOH HOH . I 4 HOH B 72 372 279 HOH HOH . I 4 HOH B 73 373 164 HOH HOH . I 4 HOH B 74 374 284 HOH HOH . I 4 HOH B 75 375 166 HOH HOH . I 4 HOH B 76 376 48 HOH HOH . I 4 HOH B 77 377 232 HOH HOH . I 4 HOH B 78 378 62 HOH HOH . I 4 HOH B 79 379 112 HOH HOH . I 4 HOH B 80 380 224 HOH HOH . I 4 HOH B 81 381 152 HOH HOH . I 4 HOH B 82 382 50 HOH HOH . I 4 HOH B 83 383 241 HOH HOH . I 4 HOH B 84 384 147 HOH HOH . I 4 HOH B 85 385 184 HOH HOH . I 4 HOH B 86 386 56 HOH HOH . I 4 HOH B 87 387 310 HOH HOH . I 4 HOH B 88 388 311 HOH HOH . I 4 HOH B 89 389 219 HOH HOH . I 4 HOH B 90 390 321 HOH HOH . I 4 HOH B 91 391 212 HOH HOH . I 4 HOH B 92 392 246 HOH HOH . I 4 HOH B 93 393 290 HOH HOH . I 4 HOH B 94 394 293 HOH HOH . I 4 HOH B 95 395 85 HOH HOH . I 4 HOH B 96 396 84 HOH HOH . I 4 HOH B 97 397 120 HOH HOH . I 4 HOH B 98 398 307 HOH HOH . I 4 HOH B 99 399 280 HOH HOH . I 4 HOH B 100 400 222 HOH HOH . I 4 HOH B 101 401 100 HOH HOH . I 4 HOH B 102 402 33 HOH HOH . I 4 HOH B 103 403 192 HOH HOH . I 4 HOH B 104 404 126 HOH HOH . I 4 HOH B 105 405 185 HOH HOH . I 4 HOH B 106 406 188 HOH HOH . I 4 HOH B 107 407 256 HOH HOH . I 4 HOH B 108 408 200 HOH HOH . I 4 HOH B 109 409 294 HOH HOH . I 4 HOH B 110 410 308 HOH HOH . I 4 HOH B 111 411 208 HOH HOH . I 4 HOH B 112 412 235 HOH HOH . I 4 HOH B 113 413 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 29.144 22.299 22.941 1 31.32 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . E 3 28.953 21.292 23.942 1 33.37 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . E 3 28.144 23.408 23.041 1 29.27 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . E 3 27.276 23.369 21.941 1 30.35 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #