data_6G1J
#
_model_server_result.job_id            36dWKIZFsiKEMHQZlY3npw 
_model_server_result.datetime_utc      '2024-11-24 14:29:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g1j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":408}' 
#
_entry.id    6G1J 
#
_exptl.entry_id    6G1J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6G1J 
_cell.length_a            69.67 
_cell.length_b            69.67 
_cell.length_c            186.43 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G1J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 136 A LYS 169 1_555 B C FMT . A FMT 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
metalc ? metalc1 A NE2 HIS 22 A HIS 55 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc2 A NE2 HIS 24 A HIS 57 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc3 A ND1 HIS 168 A HIS 201 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc4 A NE2 HIS 197 A HIS 230 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc5 A OD1 ASP 268 A ASP 301 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc6 B O1 FMT . A FMT 401 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc7 B O2 FMT . A FMT 401 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? 
metalc ? metalc8 C ZN ZN . A ZN 402 1_555 P O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? 
metalc ? metalc9 D ZN ZN . A ZN 403 1_555 P O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc10 D ZN ZN . A ZN 403 1_555 P O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 160 n n 
C1 C2 GOL sing 161 n n 
C1 H11 GOL sing 162 n n 
C1 H12 GOL sing 163 n n 
O1 HO1 GOL sing 164 n n 
C2 O2 GOL sing 165 n n 
C2 C3 GOL sing 166 n n 
C2 H2 GOL sing 167 n n 
O2 HO2 GOL sing 168 n n 
C3 O3 GOL sing 169 n n 
C3 H31 GOL sing 170 n n 
C3 H32 GOL sing 171 n n 
O3 HO3 GOL sing 172 n n 
#
_atom_sites.entry_id                     6G1J 
_atom_sites.fract_transf_matrix[1][1]    0.014353 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014353 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005364 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMT A 1 401 369 FMT FMT . 
C 3 ZN A 1 402 401 ZN ZN . 
D 3 ZN A 1 403 402 ZN ZN . 
E 4 IMD A 1 404 1 IMD IMD . 
F 5 GOL A 1 405 502 GOL GOL . 
G 5 GOL A 1 406 503 GOL GOL . 
H 5 GOL A 1 407 504 GOL GOL . 
I 5 GOL A 1 408 507 GOL GOL . 
J 6 SO4 A 1 409 506 SO4 SO4 . 
K 6 SO4 A 1 410 508 SO4 SO4 . 
L 3 ZN A 1 411 601 ZN ZN . 
M 3 ZN A 1 412 603 ZN ZN . 
N 7 E8N A 1 413 577 E8N DRG . 
O 6 SO4 A 1 414 1 SO4 SO4 . 
P 8 HOH A 1 501 195 HOH HOH . 
P 8 HOH A 2 502 194 HOH HOH . 
P 8 HOH A 3 503 87 HOH HOH . 
P 8 HOH A 4 504 109 HOH HOH . 
P 8 HOH A 5 505 104 HOH HOH . 
P 8 HOH A 6 506 100 HOH HOH . 
P 8 HOH A 7 507 58 HOH HOH . 
P 8 HOH A 8 508 96 HOH HOH . 
P 8 HOH A 9 509 149 HOH HOH . 
P 8 HOH A 10 510 57 HOH HOH . 
P 8 HOH A 11 511 51 HOH HOH . 
P 8 HOH A 12 512 53 HOH HOH . 
P 8 HOH A 13 513 59 HOH HOH . 
P 8 HOH A 14 514 123 HOH HOH . 
P 8 HOH A 15 515 11 HOH HOH . 
P 8 HOH A 16 516 82 HOH HOH . 
P 8 HOH A 17 517 144 HOH HOH . 
P 8 HOH A 18 518 112 HOH HOH . 
P 8 HOH A 19 519 83 HOH HOH . 
P 8 HOH A 20 520 130 HOH HOH . 
P 8 HOH A 21 521 119 HOH HOH . 
P 8 HOH A 22 522 36 HOH HOH . 
P 8 HOH A 23 523 7 HOH HOH . 
P 8 HOH A 24 524 185 HOH HOH . 
P 8 HOH A 25 525 71 HOH HOH . 
P 8 HOH A 26 526 139 HOH HOH . 
P 8 HOH A 27 527 154 HOH HOH . 
P 8 HOH A 28 528 31 HOH HOH . 
P 8 HOH A 29 529 166 HOH HOH . 
P 8 HOH A 30 530 103 HOH HOH . 
P 8 HOH A 31 531 94 HOH HOH . 
P 8 HOH A 32 532 23 HOH HOH . 
P 8 HOH A 33 533 155 HOH HOH . 
P 8 HOH A 34 534 164 HOH HOH . 
P 8 HOH A 35 535 24 HOH HOH . 
P 8 HOH A 36 536 61 HOH HOH . 
P 8 HOH A 37 537 145 HOH HOH . 
P 8 HOH A 38 538 95 HOH HOH . 
P 8 HOH A 39 539 52 HOH HOH . 
P 8 HOH A 40 540 101 HOH HOH . 
P 8 HOH A 41 541 88 HOH HOH . 
P 8 HOH A 42 542 97 HOH HOH . 
P 8 HOH A 43 543 84 HOH HOH . 
P 8 HOH A 44 544 44 HOH HOH . 
P 8 HOH A 45 545 175 HOH HOH . 
P 8 HOH A 46 546 178 HOH HOH . 
P 8 HOH A 47 547 42 HOH HOH . 
P 8 HOH A 48 548 62 HOH HOH . 
P 8 HOH A 49 549 171 HOH HOH . 
P 8 HOH A 50 550 140 HOH HOH . 
P 8 HOH A 51 551 111 HOH HOH . 
P 8 HOH A 52 552 122 HOH HOH . 
P 8 HOH A 53 553 65 HOH HOH . 
P 8 HOH A 54 554 79 HOH HOH . 
P 8 HOH A 55 555 148 HOH HOH . 
P 8 HOH A 56 556 142 HOH HOH . 
P 8 HOH A 57 557 105 HOH HOH . 
P 8 HOH A 58 558 81 HOH HOH . 
P 8 HOH A 59 559 80 HOH HOH . 
P 8 HOH A 60 560 28 HOH HOH . 
P 8 HOH A 61 561 74 HOH HOH . 
P 8 HOH A 62 562 77 HOH HOH . 
P 8 HOH A 63 563 9 HOH HOH . 
P 8 HOH A 64 564 34 HOH HOH . 
P 8 HOH A 65 565 46 HOH HOH . 
P 8 HOH A 66 566 45 HOH HOH . 
P 8 HOH A 67 567 54 HOH HOH . 
P 8 HOH A 68 568 136 HOH HOH . 
P 8 HOH A 69 569 55 HOH HOH . 
P 8 HOH A 70 570 99 HOH HOH . 
P 8 HOH A 71 571 159 HOH HOH . 
P 8 HOH A 72 572 186 HOH HOH . 
P 8 HOH A 73 573 75 HOH HOH . 
P 8 HOH A 74 574 32 HOH HOH . 
P 8 HOH A 75 575 106 HOH HOH . 
P 8 HOH A 76 576 172 HOH HOH . 
P 8 HOH A 77 577 128 HOH HOH . 
P 8 HOH A 78 578 177 HOH HOH . 
P 8 HOH A 79 579 19 HOH HOH . 
P 8 HOH A 80 580 72 HOH HOH . 
P 8 HOH A 81 581 39 HOH HOH . 
P 8 HOH A 82 582 26 HOH HOH . 
P 8 HOH A 83 583 188 HOH HOH . 
P 8 HOH A 84 584 92 HOH HOH . 
P 8 HOH A 85 585 116 HOH HOH . 
P 8 HOH A 86 586 157 HOH HOH . 
P 8 HOH A 87 587 90 HOH HOH . 
P 8 HOH A 88 588 43 HOH HOH . 
P 8 HOH A 89 589 118 HOH HOH . 
P 8 HOH A 90 590 129 HOH HOH . 
P 8 HOH A 91 591 20 HOH HOH . 
P 8 HOH A 92 592 6 HOH HOH . 
P 8 HOH A 93 593 153 HOH HOH . 
P 8 HOH A 94 594 29 HOH HOH . 
P 8 HOH A 95 595 5 HOH HOH . 
P 8 HOH A 96 596 108 HOH HOH . 
P 8 HOH A 97 597 73 HOH HOH . 
P 8 HOH A 98 598 63 HOH HOH . 
P 8 HOH A 99 599 30 HOH HOH . 
P 8 HOH A 100 600 125 HOH HOH . 
P 8 HOH A 101 601 47 HOH HOH . 
P 8 HOH A 102 602 89 HOH HOH . 
P 8 HOH A 103 603 8 HOH HOH . 
P 8 HOH A 104 604 133 HOH HOH . 
P 8 HOH A 105 605 66 HOH HOH . 
P 8 HOH A 106 606 16 HOH HOH . 
P 8 HOH A 107 607 184 HOH HOH . 
P 8 HOH A 108 608 48 HOH HOH . 
P 8 HOH A 109 609 102 HOH HOH . 
P 8 HOH A 110 610 173 HOH HOH . 
P 8 HOH A 111 611 115 HOH HOH . 
P 8 HOH A 112 612 67 HOH HOH . 
P 8 HOH A 113 613 180 HOH HOH . 
P 8 HOH A 114 614 10 HOH HOH . 
P 8 HOH A 115 615 68 HOH HOH . 
P 8 HOH A 116 616 18 HOH HOH . 
P 8 HOH A 117 617 169 HOH HOH . 
P 8 HOH A 118 618 143 HOH HOH . 
P 8 HOH A 119 619 187 HOH HOH . 
P 8 HOH A 120 620 114 HOH HOH . 
P 8 HOH A 121 621 85 HOH HOH . 
P 8 HOH A 122 622 181 HOH HOH . 
P 8 HOH A 123 623 12 HOH HOH . 
P 8 HOH A 124 624 21 HOH HOH . 
P 8 HOH A 125 625 33 HOH HOH . 
P 8 HOH A 126 626 41 HOH HOH . 
P 8 HOH A 127 627 152 HOH HOH . 
P 8 HOH A 128 628 56 HOH HOH . 
P 8 HOH A 129 629 182 HOH HOH . 
P 8 HOH A 130 630 50 HOH HOH . 
P 8 HOH A 131 631 69 HOH HOH . 
P 8 HOH A 132 632 37 HOH HOH . 
P 8 HOH A 133 633 13 HOH HOH . 
P 8 HOH A 134 634 14 HOH HOH . 
P 8 HOH A 135 635 191 HOH HOH . 
P 8 HOH A 136 636 131 HOH HOH . 
P 8 HOH A 137 637 17 HOH HOH . 
P 8 HOH A 138 638 190 HOH HOH . 
P 8 HOH A 139 639 98 HOH HOH . 
P 8 HOH A 140 640 91 HOH HOH . 
P 8 HOH A 141 641 107 HOH HOH . 
P 8 HOH A 142 642 156 HOH HOH . 
P 8 HOH A 143 643 124 HOH HOH . 
P 8 HOH A 144 644 35 HOH HOH . 
P 8 HOH A 145 645 192 HOH HOH . 
P 8 HOH A 146 646 138 HOH HOH . 
P 8 HOH A 147 647 38 HOH HOH . 
P 8 HOH A 148 648 126 HOH HOH . 
P 8 HOH A 149 649 127 HOH HOH . 
P 8 HOH A 150 650 158 HOH HOH . 
P 8 HOH A 151 651 76 HOH HOH . 
P 8 HOH A 152 652 40 HOH HOH . 
P 8 HOH A 153 653 150 HOH HOH . 
P 8 HOH A 154 654 64 HOH HOH . 
P 8 HOH A 155 655 49 HOH HOH . 
P 8 HOH A 156 656 147 HOH HOH . 
P 8 HOH A 157 657 162 HOH HOH . 
P 8 HOH A 158 658 93 HOH HOH . 
P 8 HOH A 159 659 151 HOH HOH . 
P 8 HOH A 160 660 189 HOH HOH . 
P 8 HOH A 161 661 132 HOH HOH . 
P 8 HOH A 162 662 27 HOH HOH . 
P 8 HOH A 163 663 163 HOH HOH . 
P 8 HOH A 164 664 176 HOH HOH . 
P 8 HOH A 165 665 160 HOH HOH . 
P 8 HOH A 166 666 134 HOH HOH . 
P 8 HOH A 167 667 168 HOH HOH . 
P 8 HOH A 168 668 161 HOH HOH . 
P 8 HOH A 169 669 170 HOH HOH . 
P 8 HOH A 170 670 179 HOH HOH . 
P 8 HOH A 171 671 70 HOH HOH . 
P 8 HOH A 172 672 183 HOH HOH . 
P 8 HOH A 173 673 141 HOH HOH . 
P 8 HOH A 174 674 15 HOH HOH . 
P 8 HOH A 175 675 165 HOH HOH . 
P 8 HOH A 176 676 167 HOH HOH . 
P 8 HOH A 177 677 135 HOH HOH . 
P 8 HOH A 178 678 146 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 5 -29.449 -18.421 7.869 1 40.99 ? C1 GOL 408 A 1 
HETATM 2 O O1 GOL . . . I 5 -28.265 -18.341 7.037 1 39.06 ? O1 GOL 408 A 1 
HETATM 3 C C2 GOL . . . I 5 -29.994 -16.989 8.062 1 38.9 ? C2 GOL 408 A 1 
HETATM 4 O O2 GOL . . . I 5 -31.242 -16.903 7.435 1 40.12 ? O2 GOL 408 A 1 
HETATM 5 C C3 GOL . . . I 5 -30.2 -16.502 9.511 1 35.63 ? C3 GOL 408 A 1 
HETATM 6 O O3 GOL . . . I 5 -29.997 -15.08 9.725 1 24.99 ? O3 GOL 408 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#