data_6G22 # _model_server_result.job_id T5rE7aNyt3s7u6QxG2s7nw _model_server_result.datetime_utc '2024-11-07 02:46:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6G22 # _exptl.entry_id 6G22 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G22 _cell.length_a 73.753 _cell.length_b 73.753 _cell.length_c 106.563 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 53.2815 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 171 A CYS 197 1_555 C S2 BME . A BME 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc1 A OD2 ASP 15 A ASP 41 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc2 A O ASP 17 A ASP 43 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc3 A OD1 ASP 150 A ASP 176 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc4 B MG MG . A MG 301 1_555 F OBG 2O2 . A 2O2 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc5 B MG MG . A MG 301 1_555 G O HOH . A HOH 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc6 B MG MG . A MG 301 1_555 G O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 194 n n C1 C2 GOL sing 195 n n C1 H11 GOL sing 196 n n C1 H12 GOL sing 197 n n O1 HO1 GOL sing 198 n n C2 O2 GOL sing 199 n n C2 C3 GOL sing 200 n n C2 H2 GOL sing 201 n n O2 HO2 GOL sing 202 n n C3 O3 GOL sing 203 n n C3 H31 GOL sing 204 n n C3 H32 GOL sing 205 n n O3 HO3 GOL sing 206 n n # _atom_sites.entry_id 6G22 _atom_sites.fract_transf_matrix[1][1] 0.013559 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013559 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009384 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 301 MG MG . C 3 BME A 1 302 1 BME BME . D 4 GOL A 1 303 1 GOL GOL . E 4 GOL A 1 304 2 GOL GOL . F 5 2O2 A 1 305 1 2O2 DP2 . G 6 HOH A 1 401 232 HOH HOH . G 6 HOH A 2 402 120 HOH HOH . G 6 HOH A 3 403 196 HOH HOH . G 6 HOH A 4 404 181 HOH HOH . G 6 HOH A 5 405 139 HOH HOH . G 6 HOH A 6 406 135 HOH HOH . G 6 HOH A 7 407 126 HOH HOH . G 6 HOH A 8 408 110 HOH HOH . G 6 HOH A 9 409 115 HOH HOH . G 6 HOH A 10 410 171 HOH HOH . G 6 HOH A 11 411 202 HOH HOH . G 6 HOH A 12 412 65 HOH HOH . G 6 HOH A 13 413 1 HOH HOH . G 6 HOH A 14 414 78 HOH HOH . G 6 HOH A 15 415 187 HOH HOH . G 6 HOH A 16 416 9 HOH HOH . G 6 HOH A 17 417 82 HOH HOH . G 6 HOH A 18 418 11 HOH HOH . G 6 HOH A 19 419 48 HOH HOH . G 6 HOH A 20 420 206 HOH HOH . G 6 HOH A 21 421 100 HOH HOH . G 6 HOH A 22 422 91 HOH HOH . G 6 HOH A 23 423 24 HOH HOH . G 6 HOH A 24 424 36 HOH HOH . G 6 HOH A 25 425 79 HOH HOH . G 6 HOH A 26 426 159 HOH HOH . G 6 HOH A 27 427 144 HOH HOH . G 6 HOH A 28 428 33 HOH HOH . G 6 HOH A 29 429 86 HOH HOH . G 6 HOH A 30 430 22 HOH HOH . G 6 HOH A 31 431 56 HOH HOH . G 6 HOH A 32 432 62 HOH HOH . G 6 HOH A 33 433 53 HOH HOH . G 6 HOH A 34 434 49 HOH HOH . G 6 HOH A 35 435 109 HOH HOH . G 6 HOH A 36 436 223 HOH HOH . G 6 HOH A 37 437 2 HOH HOH . G 6 HOH A 38 438 239 HOH HOH . G 6 HOH A 39 439 73 HOH HOH . G 6 HOH A 40 440 59 HOH HOH . G 6 HOH A 41 441 74 HOH HOH . G 6 HOH A 42 442 133 HOH HOH . G 6 HOH A 43 443 183 HOH HOH . G 6 HOH A 44 444 34 HOH HOH . G 6 HOH A 45 445 145 HOH HOH . G 6 HOH A 46 446 218 HOH HOH . G 6 HOH A 47 447 5 HOH HOH . G 6 HOH A 48 448 15 HOH HOH . G 6 HOH A 49 449 80 HOH HOH . G 6 HOH A 50 450 42 HOH HOH . G 6 HOH A 51 451 112 HOH HOH . G 6 HOH A 52 452 192 HOH HOH . G 6 HOH A 53 453 194 HOH HOH . G 6 HOH A 54 454 3 HOH HOH . G 6 HOH A 55 455 163 HOH HOH . G 6 HOH A 56 456 197 HOH HOH . G 6 HOH A 57 457 150 HOH HOH . G 6 HOH A 58 458 8 HOH HOH . G 6 HOH A 59 459 98 HOH HOH . G 6 HOH A 60 460 122 HOH HOH . G 6 HOH A 61 461 167 HOH HOH . G 6 HOH A 62 462 209 HOH HOH . G 6 HOH A 63 463 215 HOH HOH . G 6 HOH A 64 464 200 HOH HOH . G 6 HOH A 65 465 12 HOH HOH . G 6 HOH A 66 466 198 HOH HOH . G 6 HOH A 67 467 165 HOH HOH . G 6 HOH A 68 468 46 HOH HOH . G 6 HOH A 69 469 136 HOH HOH . G 6 HOH A 70 470 123 HOH HOH . G 6 HOH A 71 471 27 HOH HOH . G 6 HOH A 72 472 130 HOH HOH . G 6 HOH A 73 473 129 HOH HOH . G 6 HOH A 74 474 182 HOH HOH . G 6 HOH A 75 475 41 HOH HOH . G 6 HOH A 76 476 104 HOH HOH . G 6 HOH A 77 477 185 HOH HOH . G 6 HOH A 78 478 140 HOH HOH . G 6 HOH A 79 479 236 HOH HOH . G 6 HOH A 80 480 116 HOH HOH . G 6 HOH A 81 481 23 HOH HOH . G 6 HOH A 82 482 16 HOH HOH . G 6 HOH A 83 483 87 HOH HOH . G 6 HOH A 84 484 29 HOH HOH . G 6 HOH A 85 485 164 HOH HOH . G 6 HOH A 86 486 17 HOH HOH . G 6 HOH A 87 487 205 HOH HOH . G 6 HOH A 88 488 180 HOH HOH . G 6 HOH A 89 489 76 HOH HOH . G 6 HOH A 90 490 157 HOH HOH . G 6 HOH A 91 491 69 HOH HOH . G 6 HOH A 92 492 195 HOH HOH . G 6 HOH A 93 493 21 HOH HOH . G 6 HOH A 94 494 44 HOH HOH . G 6 HOH A 95 495 191 HOH HOH . G 6 HOH A 96 496 71 HOH HOH . G 6 HOH A 97 497 127 HOH HOH . G 6 HOH A 98 498 20 HOH HOH . G 6 HOH A 99 499 45 HOH HOH . G 6 HOH A 100 500 94 HOH HOH . G 6 HOH A 101 501 60 HOH HOH . G 6 HOH A 102 502 30 HOH HOH . G 6 HOH A 103 503 19 HOH HOH . G 6 HOH A 104 504 68 HOH HOH . G 6 HOH A 105 505 212 HOH HOH . G 6 HOH A 106 506 83 HOH HOH . G 6 HOH A 107 507 28 HOH HOH . G 6 HOH A 108 508 224 HOH HOH . G 6 HOH A 109 509 84 HOH HOH . G 6 HOH A 110 510 190 HOH HOH . G 6 HOH A 111 511 85 HOH HOH . G 6 HOH A 112 512 32 HOH HOH . G 6 HOH A 113 513 77 HOH HOH . G 6 HOH A 114 514 143 HOH HOH . G 6 HOH A 115 515 51 HOH HOH . G 6 HOH A 116 516 221 HOH HOH . G 6 HOH A 117 517 158 HOH HOH . G 6 HOH A 118 518 52 HOH HOH . G 6 HOH A 119 519 50 HOH HOH . G 6 HOH A 120 520 154 HOH HOH . G 6 HOH A 121 521 146 HOH HOH . G 6 HOH A 122 522 211 HOH HOH . G 6 HOH A 123 523 64 HOH HOH . G 6 HOH A 124 524 92 HOH HOH . G 6 HOH A 125 525 7 HOH HOH . G 6 HOH A 126 526 43 HOH HOH . G 6 HOH A 127 527 37 HOH HOH . G 6 HOH A 128 528 188 HOH HOH . G 6 HOH A 129 529 58 HOH HOH . G 6 HOH A 130 530 10 HOH HOH . G 6 HOH A 131 531 113 HOH HOH . G 6 HOH A 132 532 99 HOH HOH . G 6 HOH A 133 533 124 HOH HOH . G 6 HOH A 134 534 63 HOH HOH . G 6 HOH A 135 535 125 HOH HOH . G 6 HOH A 136 536 39 HOH HOH . G 6 HOH A 137 537 61 HOH HOH . G 6 HOH A 138 538 177 HOH HOH . G 6 HOH A 139 539 138 HOH HOH . G 6 HOH A 140 540 66 HOH HOH . G 6 HOH A 141 541 26 HOH HOH . G 6 HOH A 142 542 179 HOH HOH . G 6 HOH A 143 543 152 HOH HOH . G 6 HOH A 144 544 14 HOH HOH . G 6 HOH A 145 545 107 HOH HOH . G 6 HOH A 146 546 47 HOH HOH . G 6 HOH A 147 547 40 HOH HOH . G 6 HOH A 148 548 141 HOH HOH . G 6 HOH A 149 549 13 HOH HOH . G 6 HOH A 150 550 35 HOH HOH . G 6 HOH A 151 551 201 HOH HOH . G 6 HOH A 152 552 72 HOH HOH . G 6 HOH A 153 553 4 HOH HOH . G 6 HOH A 154 554 114 HOH HOH . G 6 HOH A 155 555 193 HOH HOH . G 6 HOH A 156 556 148 HOH HOH . G 6 HOH A 157 557 178 HOH HOH . G 6 HOH A 158 558 174 HOH HOH . G 6 HOH A 159 559 128 HOH HOH . G 6 HOH A 160 560 208 HOH HOH . G 6 HOH A 161 561 189 HOH HOH . G 6 HOH A 162 562 75 HOH HOH . G 6 HOH A 163 563 31 HOH HOH . G 6 HOH A 164 564 18 HOH HOH . G 6 HOH A 165 565 38 HOH HOH . G 6 HOH A 166 566 97 HOH HOH . G 6 HOH A 167 567 131 HOH HOH . G 6 HOH A 168 568 6 HOH HOH . G 6 HOH A 169 569 55 HOH HOH . G 6 HOH A 170 570 132 HOH HOH . G 6 HOH A 171 571 57 HOH HOH . G 6 HOH A 172 572 207 HOH HOH . G 6 HOH A 173 573 184 HOH HOH . G 6 HOH A 174 574 106 HOH HOH . G 6 HOH A 175 575 121 HOH HOH . G 6 HOH A 176 576 172 HOH HOH . G 6 HOH A 177 577 203 HOH HOH . G 6 HOH A 178 578 54 HOH HOH . G 6 HOH A 179 579 137 HOH HOH . G 6 HOH A 180 580 168 HOH HOH . G 6 HOH A 181 581 81 HOH HOH . G 6 HOH A 182 582 155 HOH HOH . G 6 HOH A 183 583 219 HOH HOH . G 6 HOH A 184 584 186 HOH HOH . G 6 HOH A 185 585 67 HOH HOH . G 6 HOH A 186 586 95 HOH HOH . G 6 HOH A 187 587 199 HOH HOH . G 6 HOH A 188 588 222 HOH HOH . G 6 HOH A 189 589 118 HOH HOH . G 6 HOH A 190 590 231 HOH HOH . G 6 HOH A 191 591 119 HOH HOH . G 6 HOH A 192 592 160 HOH HOH . G 6 HOH A 193 593 169 HOH HOH . G 6 HOH A 194 594 237 HOH HOH . G 6 HOH A 195 595 229 HOH HOH . G 6 HOH A 196 596 230 HOH HOH . G 6 HOH A 197 597 162 HOH HOH . G 6 HOH A 198 598 93 HOH HOH . G 6 HOH A 199 599 213 HOH HOH . G 6 HOH A 200 600 216 HOH HOH . G 6 HOH A 201 601 227 HOH HOH . G 6 HOH A 202 602 170 HOH HOH . G 6 HOH A 203 603 90 HOH HOH . G 6 HOH A 204 604 175 HOH HOH . G 6 HOH A 205 605 225 HOH HOH . G 6 HOH A 206 606 103 HOH HOH . G 6 HOH A 207 607 240 HOH HOH . G 6 HOH A 208 608 234 HOH HOH . G 6 HOH A 209 609 108 HOH HOH . G 6 HOH A 210 610 173 HOH HOH . G 6 HOH A 211 611 25 HOH HOH . G 6 HOH A 212 612 102 HOH HOH . G 6 HOH A 213 613 161 HOH HOH . G 6 HOH A 214 614 151 HOH HOH . G 6 HOH A 215 615 153 HOH HOH . G 6 HOH A 216 616 142 HOH HOH . G 6 HOH A 217 617 88 HOH HOH . G 6 HOH A 218 618 70 HOH HOH . G 6 HOH A 219 619 210 HOH HOH . G 6 HOH A 220 620 117 HOH HOH . G 6 HOH A 221 621 147 HOH HOH . G 6 HOH A 222 622 105 HOH HOH . G 6 HOH A 223 623 238 HOH HOH . G 6 HOH A 224 624 228 HOH HOH . G 6 HOH A 225 625 156 HOH HOH . G 6 HOH A 226 626 214 HOH HOH . G 6 HOH A 227 627 226 HOH HOH . G 6 HOH A 228 628 166 HOH HOH . G 6 HOH A 229 629 149 HOH HOH . G 6 HOH A 230 630 96 HOH HOH . G 6 HOH A 231 631 89 HOH HOH . G 6 HOH A 232 632 217 HOH HOH . G 6 HOH A 233 633 176 HOH HOH . G 6 HOH A 234 634 101 HOH HOH . G 6 HOH A 235 635 233 HOH HOH . G 6 HOH A 236 636 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . A . D 4 6.235 22.351 28.204 0.5 29.57 ? C1 GOL 303 A 1 HETATM 2 O O1 GOL . A . D 4 6.745 21.119 27.711 0.5 27.03 ? O1 GOL 303 A 1 HETATM 3 C C2 GOL . A . D 4 6.121 22.183 29.696 0.5 31.26 ? C2 GOL 303 A 1 HETATM 4 O O2 GOL . A . D 4 5.657 20.832 29.924 0.5 33.23 ? O2 GOL 303 A 1 HETATM 5 C C3 GOL . A . D 4 5.159 23.271 30.124 0.5 29.92 ? C3 GOL 303 A 1 HETATM 6 O O3 GOL . A . D 4 5.198 23.504 31.522 0.5 27.36 ? O3 GOL 303 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #