data_6G2P # _model_server_result.job_id xCocFFm9Glwc3ovFFZYniA _model_server_result.datetime_utc '2024-11-23 13:59:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 6G2P # _exptl.entry_id 6G2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G2P _cell.length_a 152.092 _cell.length_b 175.338 _cell.length_c 94.436 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 365 A CYS 366 1_555 B SG CYS 394 A CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 A O ALA 239 B ALA 240 1_555 F MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc2 C O1P FAD . B FAD 501 1_555 F MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? metalc ? metalc3 B O ALA 239 A ALA 240 1_555 J MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 406 n n N H TRP sing 407 n n N H2 TRP sing 408 n n CA C TRP sing 409 n n CA CB TRP sing 410 n n CA HA TRP sing 411 n n C O TRP doub 412 n n C OXT TRP sing 413 n n CB CG TRP sing 414 n n CB HB2 TRP sing 415 n n CB HB3 TRP sing 416 n n CG CD1 TRP doub 417 n y CG CD2 TRP sing 418 n y CD1 NE1 TRP sing 419 n y CD1 HD1 TRP sing 420 n n CD2 CE2 TRP doub 421 n y CD2 CE3 TRP sing 422 n y NE1 CE2 TRP sing 423 n y NE1 HE1 TRP sing 424 n n CE2 CZ2 TRP sing 425 n y CE3 CZ3 TRP doub 426 n y CE3 HE3 TRP sing 427 n n CZ2 CH2 TRP doub 428 n y CZ2 HZ2 TRP sing 429 n n CZ3 CH2 TRP sing 430 n y CZ3 HZ3 TRP sing 431 n n CH2 HH2 TRP sing 432 n n OXT HXT TRP sing 433 n n # _atom_sites.entry_id 6G2P _atom_sites.fract_transf_matrix[1][1] 0.006575 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005703 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD B 1 501 1 FAD FAD . D 3 TRP B 1 502 2 TRP TRP . E 4 EDO B 1 503 2 EDO EDO . F 5 MG B 1 504 2 MG MG . G 2 FAD A 1 501 2 FAD FAD . H 3 TRP A 1 502 1 TRP TRP . I 4 EDO A 1 503 1 EDO EDO . J 5 MG A 1 504 1 MG MG . K 6 HOH B 1 601 91 HOH HOH . K 6 HOH B 2 602 87 HOH HOH . K 6 HOH B 3 603 165 HOH HOH . K 6 HOH B 4 604 31 HOH HOH . K 6 HOH B 5 605 193 HOH HOH . K 6 HOH B 6 606 29 HOH HOH . K 6 HOH B 7 607 189 HOH HOH . K 6 HOH B 8 608 102 HOH HOH . K 6 HOH B 9 609 39 HOH HOH . K 6 HOH B 10 610 92 HOH HOH . K 6 HOH B 11 611 98 HOH HOH . K 6 HOH B 12 612 5 HOH HOH . K 6 HOH B 13 613 180 HOH HOH . K 6 HOH B 14 614 106 HOH HOH . K 6 HOH B 15 615 53 HOH HOH . K 6 HOH B 16 616 28 HOH HOH . K 6 HOH B 17 617 49 HOH HOH . K 6 HOH B 18 618 82 HOH HOH . K 6 HOH B 19 619 10 HOH HOH . K 6 HOH B 20 620 249 HOH HOH . K 6 HOH B 21 621 11 HOH HOH . K 6 HOH B 22 622 43 HOH HOH . K 6 HOH B 23 623 188 HOH HOH . K 6 HOH B 24 624 13 HOH HOH . K 6 HOH B 25 625 78 HOH HOH . K 6 HOH B 26 626 65 HOH HOH . K 6 HOH B 27 627 50 HOH HOH . K 6 HOH B 28 628 75 HOH HOH . K 6 HOH B 29 629 89 HOH HOH . K 6 HOH B 30 630 245 HOH HOH . K 6 HOH B 31 631 12 HOH HOH . K 6 HOH B 32 632 169 HOH HOH . K 6 HOH B 33 633 171 HOH HOH . K 6 HOH B 34 634 250 HOH HOH . K 6 HOH B 35 635 121 HOH HOH . K 6 HOH B 36 636 52 HOH HOH . K 6 HOH B 37 637 167 HOH HOH . K 6 HOH B 38 638 196 HOH HOH . K 6 HOH B 39 639 57 HOH HOH . K 6 HOH B 40 640 152 HOH HOH . K 6 HOH B 41 641 100 HOH HOH . K 6 HOH B 42 642 173 HOH HOH . K 6 HOH B 43 643 133 HOH HOH . K 6 HOH B 44 644 162 HOH HOH . K 6 HOH B 45 645 46 HOH HOH . K 6 HOH B 46 646 115 HOH HOH . K 6 HOH B 47 647 33 HOH HOH . K 6 HOH B 48 648 159 HOH HOH . K 6 HOH B 49 649 228 HOH HOH . K 6 HOH B 50 650 59 HOH HOH . K 6 HOH B 51 651 101 HOH HOH . K 6 HOH B 52 652 62 HOH HOH . K 6 HOH B 53 653 223 HOH HOH . K 6 HOH B 54 654 72 HOH HOH . K 6 HOH B 55 655 136 HOH HOH . K 6 HOH B 56 656 35 HOH HOH . K 6 HOH B 57 657 110 HOH HOH . K 6 HOH B 58 658 160 HOH HOH . K 6 HOH B 59 659 27 HOH HOH . K 6 HOH B 60 660 60 HOH HOH . K 6 HOH B 61 661 69 HOH HOH . K 6 HOH B 62 662 18 HOH HOH . K 6 HOH B 63 663 41 HOH HOH . K 6 HOH B 64 664 195 HOH HOH . K 6 HOH B 65 665 157 HOH HOH . K 6 HOH B 66 666 225 HOH HOH . K 6 HOH B 67 667 120 HOH HOH . K 6 HOH B 68 668 163 HOH HOH . K 6 HOH B 69 669 129 HOH HOH . K 6 HOH B 70 670 88 HOH HOH . K 6 HOH B 71 671 127 HOH HOH . K 6 HOH B 72 672 71 HOH HOH . K 6 HOH B 73 673 226 HOH HOH . K 6 HOH B 74 674 114 HOH HOH . K 6 HOH B 75 675 38 HOH HOH . K 6 HOH B 76 676 179 HOH HOH . K 6 HOH B 77 677 219 HOH HOH . K 6 HOH B 78 678 244 HOH HOH . K 6 HOH B 79 679 90 HOH HOH . K 6 HOH B 80 680 74 HOH HOH . K 6 HOH B 81 681 215 HOH HOH . K 6 HOH B 82 682 246 HOH HOH . K 6 HOH B 83 683 107 HOH HOH . K 6 HOH B 84 684 192 HOH HOH . K 6 HOH B 85 685 95 HOH HOH . K 6 HOH B 86 686 221 HOH HOH . K 6 HOH B 87 687 123 HOH HOH . K 6 HOH B 88 688 222 HOH HOH . K 6 HOH B 89 689 97 HOH HOH . K 6 HOH B 90 690 149 HOH HOH . K 6 HOH B 91 691 83 HOH HOH . K 6 HOH B 92 692 96 HOH HOH . K 6 HOH B 93 693 151 HOH HOH . K 6 HOH B 94 694 248 HOH HOH . K 6 HOH B 95 695 170 HOH HOH . K 6 HOH B 96 696 174 HOH HOH . K 6 HOH B 97 697 224 HOH HOH . K 6 HOH B 98 698 36 HOH HOH . K 6 HOH B 99 699 112 HOH HOH . K 6 HOH B 100 700 187 HOH HOH . K 6 HOH B 101 701 126 HOH HOH . K 6 HOH B 102 702 99 HOH HOH . K 6 HOH B 103 703 175 HOH HOH . K 6 HOH B 104 704 176 HOH HOH . K 6 HOH B 105 705 94 HOH HOH . K 6 HOH B 106 706 190 HOH HOH . K 6 HOH B 107 707 66 HOH HOH . K 6 HOH B 108 708 144 HOH HOH . K 6 HOH B 109 709 116 HOH HOH . K 6 HOH B 110 710 227 HOH HOH . L 6 HOH A 1 601 247 HOH HOH . L 6 HOH A 2 602 209 HOH HOH . L 6 HOH A 3 603 204 HOH HOH . L 6 HOH A 4 604 51 HOH HOH . L 6 HOH A 5 605 185 HOH HOH . L 6 HOH A 6 606 58 HOH HOH . L 6 HOH A 7 607 119 HOH HOH . L 6 HOH A 8 608 201 HOH HOH . L 6 HOH A 9 609 203 HOH HOH . L 6 HOH A 10 610 122 HOH HOH . L 6 HOH A 11 611 184 HOH HOH . L 6 HOH A 12 612 186 HOH HOH . L 6 HOH A 13 613 212 HOH HOH . L 6 HOH A 14 614 153 HOH HOH . L 6 HOH A 15 615 14 HOH HOH . L 6 HOH A 16 616 156 HOH HOH . L 6 HOH A 17 617 26 HOH HOH . L 6 HOH A 18 618 22 HOH HOH . L 6 HOH A 19 619 148 HOH HOH . L 6 HOH A 20 620 30 HOH HOH . L 6 HOH A 21 621 54 HOH HOH . L 6 HOH A 22 622 21 HOH HOH . L 6 HOH A 23 623 7 HOH HOH . L 6 HOH A 24 624 155 HOH HOH . L 6 HOH A 25 625 20 HOH HOH . L 6 HOH A 26 626 64 HOH HOH . L 6 HOH A 27 627 70 HOH HOH . L 6 HOH A 28 628 24 HOH HOH . L 6 HOH A 29 629 111 HOH HOH . L 6 HOH A 30 630 45 HOH HOH . L 6 HOH A 31 631 23 HOH HOH . L 6 HOH A 32 632 3 HOH HOH . L 6 HOH A 33 633 2 HOH HOH . L 6 HOH A 34 634 142 HOH HOH . L 6 HOH A 35 635 73 HOH HOH . L 6 HOH A 36 636 84 HOH HOH . L 6 HOH A 37 637 4 HOH HOH . L 6 HOH A 38 638 240 HOH HOH . L 6 HOH A 39 639 108 HOH HOH . L 6 HOH A 40 640 9 HOH HOH . L 6 HOH A 41 641 17 HOH HOH . L 6 HOH A 42 642 44 HOH HOH . L 6 HOH A 43 643 154 HOH HOH . L 6 HOH A 44 644 15 HOH HOH . L 6 HOH A 45 645 242 HOH HOH . L 6 HOH A 46 646 81 HOH HOH . L 6 HOH A 47 647 200 HOH HOH . L 6 HOH A 48 648 177 HOH HOH . L 6 HOH A 49 649 232 HOH HOH . L 6 HOH A 50 650 34 HOH HOH . L 6 HOH A 51 651 32 HOH HOH . L 6 HOH A 52 652 40 HOH HOH . L 6 HOH A 53 653 178 HOH HOH . L 6 HOH A 54 654 85 HOH HOH . L 6 HOH A 55 655 199 HOH HOH . L 6 HOH A 56 656 25 HOH HOH . L 6 HOH A 57 657 63 HOH HOH . L 6 HOH A 58 658 210 HOH HOH . L 6 HOH A 59 659 16 HOH HOH . L 6 HOH A 60 660 55 HOH HOH . L 6 HOH A 61 661 243 HOH HOH . L 6 HOH A 62 662 104 HOH HOH . L 6 HOH A 63 663 37 HOH HOH . L 6 HOH A 64 664 6 HOH HOH . L 6 HOH A 65 665 230 HOH HOH . L 6 HOH A 66 666 125 HOH HOH . L 6 HOH A 67 667 56 HOH HOH . L 6 HOH A 68 668 205 HOH HOH . L 6 HOH A 69 669 146 HOH HOH . L 6 HOH A 70 670 217 HOH HOH . L 6 HOH A 71 671 124 HOH HOH . L 6 HOH A 72 672 67 HOH HOH . L 6 HOH A 73 673 80 HOH HOH . L 6 HOH A 74 674 198 HOH HOH . L 6 HOH A 75 675 76 HOH HOH . L 6 HOH A 76 676 131 HOH HOH . L 6 HOH A 77 677 48 HOH HOH . L 6 HOH A 78 678 218 HOH HOH . L 6 HOH A 79 679 77 HOH HOH . L 6 HOH A 80 680 207 HOH HOH . L 6 HOH A 81 681 19 HOH HOH . L 6 HOH A 82 682 168 HOH HOH . L 6 HOH A 83 683 147 HOH HOH . L 6 HOH A 84 684 213 HOH HOH . L 6 HOH A 85 685 216 HOH HOH . L 6 HOH A 86 686 47 HOH HOH . L 6 HOH A 87 687 103 HOH HOH . L 6 HOH A 88 688 79 HOH HOH . L 6 HOH A 89 689 233 HOH HOH . L 6 HOH A 90 690 181 HOH HOH . L 6 HOH A 91 691 150 HOH HOH . L 6 HOH A 92 692 135 HOH HOH . L 6 HOH A 93 693 42 HOH HOH . L 6 HOH A 94 694 183 HOH HOH . L 6 HOH A 95 695 138 HOH HOH . L 6 HOH A 96 696 229 HOH HOH . L 6 HOH A 97 697 164 HOH HOH . L 6 HOH A 98 698 208 HOH HOH . L 6 HOH A 99 699 137 HOH HOH . L 6 HOH A 100 700 61 HOH HOH . L 6 HOH A 101 701 68 HOH HOH . L 6 HOH A 102 702 161 HOH HOH . L 6 HOH A 103 703 109 HOH HOH . L 6 HOH A 104 704 236 HOH HOH . L 6 HOH A 105 705 239 HOH HOH . L 6 HOH A 106 706 238 HOH HOH . L 6 HOH A 107 707 241 HOH HOH . L 6 HOH A 108 708 235 HOH HOH . L 6 HOH A 109 709 194 HOH HOH . L 6 HOH A 110 710 139 HOH HOH . L 6 HOH A 111 711 202 HOH HOH . L 6 HOH A 112 712 214 HOH HOH . L 6 HOH A 113 713 86 HOH HOH . L 6 HOH A 114 714 234 HOH HOH . L 6 HOH A 115 715 132 HOH HOH . L 6 HOH A 116 716 141 HOH HOH . L 6 HOH A 117 717 117 HOH HOH . L 6 HOH A 118 718 134 HOH HOH . L 6 HOH A 119 719 191 HOH HOH . L 6 HOH A 120 720 206 HOH HOH . L 6 HOH A 121 721 158 HOH HOH . L 6 HOH A 122 722 113 HOH HOH . L 6 HOH A 123 723 220 HOH HOH . L 6 HOH A 124 724 93 HOH HOH . L 6 HOH A 125 725 211 HOH HOH . L 6 HOH A 126 726 130 HOH HOH . L 6 HOH A 127 727 182 HOH HOH . L 6 HOH A 128 728 231 HOH HOH . L 6 HOH A 129 729 105 HOH HOH . L 6 HOH A 130 730 172 HOH HOH . L 6 HOH A 131 731 237 HOH HOH . L 6 HOH A 132 732 197 HOH HOH . L 6 HOH A 133 733 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . H 3 4.109 21.089 8.685 1 59.48 ? N TRP 502 A 1 HETATM 2 C CA TRP . . . H 3 5.007 21.64 7.702 1 58.83 ? CA TRP 502 A 1 HETATM 3 C C TRP . . . H 3 4.211 22.59 6.856 1 52.24 ? C TRP 502 A 1 HETATM 4 O O TRP . . . H 3 4.123 22.471 5.663 1 46.36 ? O TRP 502 A 1 HETATM 5 C CB TRP . . . H 3 5.617 20.562 6.822 1 58.2 ? CB TRP 502 A 1 HETATM 6 C CG TRP . . . H 3 4.964 19.207 6.98 1 65.47 ? CG TRP 502 A 1 HETATM 7 C CD1 TRP . . . H 3 5.135 18.561 8.152 1 77.53 ? CD1 TRP 502 A 1 HETATM 8 C CD2 TRP . . . H 3 4.216 18.448 6.169 1 65.33 ? CD2 TRP 502 A 1 HETATM 9 N NE1 TRP . . . H 3 4.513 17.391 8.049 1 80.99 ? NE1 TRP 502 A 1 HETATM 10 C CE2 TRP . . . H 3 3.938 17.317 6.836 1 70.19 ? CE2 TRP 502 A 1 HETATM 11 C CE3 TRP . . . H 3 3.757 18.651 4.865 1 61.93 ? CE3 TRP 502 A 1 HETATM 12 C CZ2 TRP . . . H 3 3.18 16.34 6.239 1 73.95 ? CZ2 TRP 502 A 1 HETATM 13 C CZ3 TRP . . . H 3 3.005 17.689 4.26 1 58.41 ? CZ3 TRP 502 A 1 HETATM 14 C CH2 TRP . . . H 3 2.719 16.548 4.962 1 70.79 ? CH2 TRP 502 A 1 HETATM 15 O OXT TRP . . . H 3 3.628 23.529 7.391 1 56.99 -1 OXT TRP 502 A 1 # _model_server_stats.io_time_ms 112 _model_server_stats.parse_time_ms 113 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #