data_6G2Z # _model_server_result.job_id ukEVaIn2PQ2yVORfo0OCzQ _model_server_result.datetime_utc '2024-11-08 03:50:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":808}' # _entry.id 6G2Z # _exptl.entry_id 6G2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6G2Z _cell.length_a 92.389 _cell.length_b 92.389 _cell.length_c 65.988 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 166 A ASN 624 1_555 I NA NA . A NA 808 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc2 H O3B ADP . A ADP 807 1_555 I NA NA . A NA 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.012 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6G2Z _atom_sites.fract_transf_matrix[1][1] 0.010824 _atom_sites.fract_transf_matrix[1][2] 0.006249 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD A 1 801 1 MPD MPD . C 2 MPD A 1 802 2 MPD MPD . D 2 MPD A 1 803 3 MPD MPD . E 2 MPD A 1 804 4 MPD MPD . F 3 DMS A 1 805 5 DMS DMS . G 3 DMS A 1 806 6 DMS DMS . H 4 ADP A 1 807 9 ADP ADP . I 5 NA A 1 808 10 NA NA . J 6 EJW A 1 809 1 EJW LIG . K 7 HOH A 1 901 49 HOH HOH . K 7 HOH A 2 902 14 HOH HOH . K 7 HOH A 3 903 41 HOH HOH . K 7 HOH A 4 904 20 HOH HOH . K 7 HOH A 5 905 27 HOH HOH . K 7 HOH A 6 906 24 HOH HOH . K 7 HOH A 7 907 13 HOH HOH . K 7 HOH A 8 908 23 HOH HOH . K 7 HOH A 9 909 16 HOH HOH . K 7 HOH A 10 910 8 HOH HOH . K 7 HOH A 11 911 25 HOH HOH . K 7 HOH A 12 912 39 HOH HOH . K 7 HOH A 13 913 33 HOH HOH . K 7 HOH A 14 914 42 HOH HOH . K 7 HOH A 15 915 1 HOH HOH . K 7 HOH A 16 916 11 HOH HOH . K 7 HOH A 17 917 9 HOH HOH . K 7 HOH A 18 918 7 HOH HOH . K 7 HOH A 19 919 4 HOH HOH . K 7 HOH A 20 920 15 HOH HOH . K 7 HOH A 21 921 38 HOH HOH . K 7 HOH A 22 922 18 HOH HOH . K 7 HOH A 23 923 35 HOH HOH . K 7 HOH A 24 924 6 HOH HOH . K 7 HOH A 25 925 2 HOH HOH . K 7 HOH A 26 926 29 HOH HOH . K 7 HOH A 27 927 3 HOH HOH . K 7 HOH A 28 928 37 HOH HOH . K 7 HOH A 29 929 34 HOH HOH . K 7 HOH A 30 930 36 HOH HOH . K 7 HOH A 31 931 22 HOH HOH . K 7 HOH A 32 932 10 HOH HOH . K 7 HOH A 33 933 28 HOH HOH . K 7 HOH A 34 934 19 HOH HOH . K 7 HOH A 35 935 48 HOH HOH . K 7 HOH A 36 936 31 HOH HOH . K 7 HOH A 37 937 12 HOH HOH . K 7 HOH A 38 938 32 HOH HOH . K 7 HOH A 39 939 21 HOH HOH . K 7 HOH A 40 940 5 HOH HOH . K 7 HOH A 41 941 26 HOH HOH . K 7 HOH A 42 942 44 HOH HOH . K 7 HOH A 43 943 17 HOH HOH . K 7 HOH A 44 944 47 HOH HOH . K 7 HOH A 45 945 40 HOH HOH . K 7 HOH A 46 946 45 HOH HOH . K 7 HOH A 47 947 30 HOH HOH . K 7 HOH A 48 948 43 HOH HOH . K 7 HOH A 49 949 46 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 5 _atom_site.Cartn_x 119.612 _atom_site.Cartn_y 16.405 _atom_site.Cartn_z 3.121 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 808 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #