data_6G4P
#
_model_server_result.job_id            Npz0DHKqpZrYNrFaVIY2cA 
_model_server_result.datetime_utc      '2024-11-13 11:43:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g4p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    6G4P 
#
_exptl.entry_id    6G4P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6G4P 
_cell.length_a            91.51 
_cell.length_b            106.56 
_cell.length_c            150.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G4P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 K N N 
? 2 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 67 A CYS 67 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 A SG CYS 254 A CYS 254 1_555 A SG CYS 265 A CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf3 A SG CYS 402 A CYS 402 1_555 A SG CYS 521 A CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf4 B SG CYS 67 B CYS 67 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf5 B SG CYS 254 B CYS 254 1_555 B SG CYS 265 B CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf6 B SG CYS 402 B CYS 402 1_555 B SG CYS 521 B CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
covale ? covale1 A ND2 ASN 59 A ASN 59 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale2 A OG SER 200 A SER 200 1_555 E P01 ELT . A ELT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? 
covale ? covale3 A ND2 ASN 416 A ASN 416 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale4 B ND2 ASN 59 B ASN 59 1_555 K C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale5 B OG SER 200 B SER 200 1_555 M P01 ELT . B ELT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.654 ? 
covale ? covale6 B ND2 ASN 416 B ASN 416 1_555 L C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.517 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 315 n n 
C1 O1 NAG sing 316 n n 
C1 O5 NAG sing 317 n n 
C1 H1 NAG sing 318 n n 
C2 C3 NAG sing 319 n n 
C2 N2 NAG sing 320 n n 
C2 H2 NAG sing 321 n n 
C3 C4 NAG sing 322 n n 
C3 O3 NAG sing 323 n n 
C3 H3 NAG sing 324 n n 
C4 C5 NAG sing 325 n n 
C4 O4 NAG sing 326 n n 
C4 H4 NAG sing 327 n n 
C5 C6 NAG sing 328 n n 
C5 O5 NAG sing 329 n n 
C5 H5 NAG sing 330 n n 
C6 O6 NAG sing 331 n n 
C6 H61 NAG sing 332 n n 
C6 H62 NAG sing 333 n n 
C7 C8 NAG sing 334 n n 
C7 N2 NAG sing 335 n n 
C7 O7 NAG doub 336 n n 
C8 H81 NAG sing 337 n n 
C8 H82 NAG sing 338 n n 
C8 H83 NAG sing 339 n n 
N2 HN2 NAG sing 340 n n 
O1 HO1 NAG sing 341 n n 
O3 HO3 NAG sing 342 n n 
O4 HO4 NAG sing 343 n n 
O6 HO6 NAG sing 344 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6G4P 
_atom_sites.fract_transf_matrix[1][1]    0.010928 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009384 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006658 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 601 560 NAG NAG . 
D 2 NAG A 1 602 561 NAG NAG . 
E 3 ELT A 1 603 550 ELT TBN . 
F 4 JDS A 1 604 551 JDS JDS . 
G 5 CL A 1 605 1 CL CL . 
H 5 CL A 1 606 5 CL CL . 
I 5 CL A 1 607 8 CL CL . 
J 6 PG4 A 1 608 2 PG4 PG4 . 
K 2 NAG B 1 601 560 NAG NAG . 
L 2 NAG B 1 602 561 NAG NAG . 
M 3 ELT B 1 603 550 ELT TBN . 
N 4 JDS B 1 604 551 JDS JDS . 
O 5 CL B 1 605 2 CL CL . 
P 5 CL B 1 606 3 CL CL . 
Q 5 CL B 1 607 4 CL CL . 
R 5 CL B 1 608 6 CL CL . 
S 5 CL B 1 609 7 CL CL . 
T 6 PG4 B 1 610 1 PG4 PG4 . 
U 7 HOH A 1 701 38 HOH HOH . 
U 7 HOH A 2 702 26 HOH HOH . 
U 7 HOH A 3 703 51 HOH HOH . 
U 7 HOH A 4 704 27 HOH HOH . 
U 7 HOH A 5 705 36 HOH HOH . 
U 7 HOH A 6 706 8 HOH HOH . 
U 7 HOH A 7 707 35 HOH HOH . 
U 7 HOH A 8 708 37 HOH HOH . 
U 7 HOH A 9 709 10 HOH HOH . 
U 7 HOH A 10 710 11 HOH HOH . 
U 7 HOH A 11 711 34 HOH HOH . 
U 7 HOH A 12 712 29 HOH HOH . 
U 7 HOH A 13 713 39 HOH HOH . 
U 7 HOH A 14 714 50 HOH HOH . 
U 7 HOH A 15 715 49 HOH HOH . 
U 7 HOH A 16 716 46 HOH HOH . 
U 7 HOH A 17 717 32 HOH HOH . 
U 7 HOH A 18 718 12 HOH HOH . 
U 7 HOH A 19 719 9 HOH HOH . 
U 7 HOH A 20 720 33 HOH HOH . 
U 7 HOH A 21 721 25 HOH HOH . 
U 7 HOH A 22 722 24 HOH HOH . 
U 7 HOH A 23 723 52 HOH HOH . 
U 7 HOH A 24 724 53 HOH HOH . 
U 7 HOH A 25 725 31 HOH HOH . 
U 7 HOH A 26 726 28 HOH HOH . 
U 7 HOH A 27 727 14 HOH HOH . 
U 7 HOH A 28 728 57 HOH HOH . 
U 7 HOH A 29 729 13 HOH HOH . 
U 7 HOH A 30 730 30 HOH HOH . 
V 7 HOH B 1 701 7 HOH HOH . 
V 7 HOH B 2 702 47 HOH HOH . 
V 7 HOH B 3 703 20 HOH HOH . 
V 7 HOH B 4 704 23 HOH HOH . 
V 7 HOH B 5 705 48 HOH HOH . 
V 7 HOH B 6 706 22 HOH HOH . 
V 7 HOH B 7 707 56 HOH HOH . 
V 7 HOH B 8 708 44 HOH HOH . 
V 7 HOH B 9 709 6 HOH HOH . 
V 7 HOH B 10 710 21 HOH HOH . 
V 7 HOH B 11 711 45 HOH HOH . 
V 7 HOH B 12 712 15 HOH HOH . 
V 7 HOH B 13 713 16 HOH HOH . 
V 7 HOH B 14 714 19 HOH HOH . 
V 7 HOH B 15 715 55 HOH HOH . 
V 7 HOH B 16 716 4 HOH HOH . 
V 7 HOH B 17 717 42 HOH HOH . 
V 7 HOH B 18 718 5 HOH HOH . 
V 7 HOH B 19 719 40 HOH HOH . 
V 7 HOH B 20 720 3 HOH HOH . 
V 7 HOH B 21 721 18 HOH HOH . 
V 7 HOH B 22 722 54 HOH HOH . 
V 7 HOH B 23 723 17 HOH HOH . 
V 7 HOH B 24 724 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . D 2 31.84 -5.932 44.767 1 72.46 ? C1 NAG 602 A 1 
HETATM 2 C C2 NAG . . . D 2 31.93 -6.698 43.446 1 71.19 ? C2 NAG 602 A 1 
HETATM 3 C C3 NAG . . . D 2 33.191 -7.556 43.428 1 79.55 ? C3 NAG 602 A 1 
HETATM 4 C C4 NAG . . . D 2 34.41 -6.666 43.604 1 81.15 ? C4 NAG 602 A 1 
HETATM 5 C C5 NAG . . . D 2 34.305 -5.948 44.947 1 76.82 ? C5 NAG 602 A 1 
HETATM 6 C C6 NAG . . . D 2 35.443 -4.978 45.187 1 73.64 ? C6 NAG 602 A 1 
HETATM 7 C C7 NAG . . . D 2 29.621 -7.049 42.653 1 65.41 ? C7 NAG 602 A 1 
HETATM 8 C C8 NAG . . . D 2 28.51 -8.045 42.483 1 55.19 ? C8 NAG 602 A 1 
HETATM 9 N N2 NAG . . . D 2 30.746 -7.514 43.215 1 68.45 ? N2 NAG 602 A 1 
HETATM 10 O O3 NAG . . . D 2 33.292 -8.288 42.212 1 87.85 ? O3 NAG 602 A 1 
HETATM 11 O O4 NAG . . . D 2 35.616 -7.418 43.49 1 80.39 ? O4 NAG 602 A 1 
HETATM 12 O O5 NAG . . . D 2 33.088 -5.183 44.995 1 74.35 ? O5 NAG 602 A 1 
HETATM 13 O O6 NAG . . . D 2 35.058 -3.879 46.001 1 67.96 ? O6 NAG 602 A 1 
HETATM 14 O O7 NAG . . . D 2 29.502 -5.875 42.3 1 64.99 ? O7 NAG 602 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#