data_6G4P
#
_model_server_result.job_id            viyQMq8A0qU92bnmXzF6Mw 
_model_server_result.datetime_utc      '2024-11-13 11:46:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g4p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":603}' 
#
_entry.id    6G4P 
#
_exptl.entry_id    6G4P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              153.117 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ethoxy-~{N},~{N}-dimethyl-phosphonamidic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6G4P 
_cell.length_a            91.51 
_cell.length_b            106.56 
_cell.length_c            150.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G4P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 67 A CYS 67 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 A SG CYS 254 A CYS 254 1_555 A SG CYS 265 A CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf3 A SG CYS 402 A CYS 402 1_555 A SG CYS 521 A CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf4 B SG CYS 67 B CYS 67 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf5 B SG CYS 254 B CYS 254 1_555 B SG CYS 265 B CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf6 B SG CYS 402 B CYS 402 1_555 B SG CYS 521 B CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
covale ? covale1 A ND2 ASN 59 A ASN 59 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale2 A OG SER 200 A SER 200 1_555 E P01 ELT . A ELT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? 
covale ? covale3 A ND2 ASN 416 A ASN 416 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale4 B ND2 ASN 59 B ASN 59 1_555 K C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale5 B OG SER 200 B SER 200 1_555 M P01 ELT . B ELT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.654 ? 
covale ? covale6 B ND2 ASN 416 B ASN 416 1_555 L C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.517 ? 
#
_chem_comp.formula           'C4 H12 N O3 P' 
_chem_comp.formula_weight    153.117 
_chem_comp.id                ELT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ethoxy-~{N},~{N}-dimethyl-phosphonamidic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O02 P01 ELT doub 83 n n 
C07 C08 ELT sing 84 n n 
C07 O06 ELT sing 85 n n 
O06 P01 ELT sing 86 n n 
P01 N03 ELT sing 87 n n 
C04 N03 ELT sing 88 n n 
N03 C05 ELT sing 89 n n 
P01 O1 ELT sing 90 n n 
C04 H1 ELT sing 91 n n 
C04 H2 ELT sing 92 n n 
C04 H3 ELT sing 93 n n 
C05 H4 ELT sing 94 n n 
C05 H5 ELT sing 95 n n 
C05 H6 ELT sing 96 n n 
C07 H7 ELT sing 97 n n 
C07 H8 ELT sing 98 n n 
C08 H9 ELT sing 99 n n 
C08 H10 ELT sing 100 n n 
C08 H11 ELT sing 101 n n 
O1 H12 ELT sing 102 n n 
#
_atom_sites.entry_id                     6G4P 
_atom_sites.fract_transf_matrix[1][1]    0.010928 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009384 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006658 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 601 560 NAG NAG . 
D 2 NAG A 1 602 561 NAG NAG . 
E 3 ELT A 1 603 550 ELT TBN . 
F 4 JDS A 1 604 551 JDS JDS . 
G 5 CL A 1 605 1 CL CL . 
H 5 CL A 1 606 5 CL CL . 
I 5 CL A 1 607 8 CL CL . 
J 6 PG4 A 1 608 2 PG4 PG4 . 
K 2 NAG B 1 601 560 NAG NAG . 
L 2 NAG B 1 602 561 NAG NAG . 
M 3 ELT B 1 603 550 ELT TBN . 
N 4 JDS B 1 604 551 JDS JDS . 
O 5 CL B 1 605 2 CL CL . 
P 5 CL B 1 606 3 CL CL . 
Q 5 CL B 1 607 4 CL CL . 
R 5 CL B 1 608 6 CL CL . 
S 5 CL B 1 609 7 CL CL . 
T 6 PG4 B 1 610 1 PG4 PG4 . 
U 7 HOH A 1 701 38 HOH HOH . 
U 7 HOH A 2 702 26 HOH HOH . 
U 7 HOH A 3 703 51 HOH HOH . 
U 7 HOH A 4 704 27 HOH HOH . 
U 7 HOH A 5 705 36 HOH HOH . 
U 7 HOH A 6 706 8 HOH HOH . 
U 7 HOH A 7 707 35 HOH HOH . 
U 7 HOH A 8 708 37 HOH HOH . 
U 7 HOH A 9 709 10 HOH HOH . 
U 7 HOH A 10 710 11 HOH HOH . 
U 7 HOH A 11 711 34 HOH HOH . 
U 7 HOH A 12 712 29 HOH HOH . 
U 7 HOH A 13 713 39 HOH HOH . 
U 7 HOH A 14 714 50 HOH HOH . 
U 7 HOH A 15 715 49 HOH HOH . 
U 7 HOH A 16 716 46 HOH HOH . 
U 7 HOH A 17 717 32 HOH HOH . 
U 7 HOH A 18 718 12 HOH HOH . 
U 7 HOH A 19 719 9 HOH HOH . 
U 7 HOH A 20 720 33 HOH HOH . 
U 7 HOH A 21 721 25 HOH HOH . 
U 7 HOH A 22 722 24 HOH HOH . 
U 7 HOH A 23 723 52 HOH HOH . 
U 7 HOH A 24 724 53 HOH HOH . 
U 7 HOH A 25 725 31 HOH HOH . 
U 7 HOH A 26 726 28 HOH HOH . 
U 7 HOH A 27 727 14 HOH HOH . 
U 7 HOH A 28 728 57 HOH HOH . 
U 7 HOH A 29 729 13 HOH HOH . 
U 7 HOH A 30 730 30 HOH HOH . 
V 7 HOH B 1 701 7 HOH HOH . 
V 7 HOH B 2 702 47 HOH HOH . 
V 7 HOH B 3 703 20 HOH HOH . 
V 7 HOH B 4 704 23 HOH HOH . 
V 7 HOH B 5 705 48 HOH HOH . 
V 7 HOH B 6 706 22 HOH HOH . 
V 7 HOH B 7 707 56 HOH HOH . 
V 7 HOH B 8 708 44 HOH HOH . 
V 7 HOH B 9 709 6 HOH HOH . 
V 7 HOH B 10 710 21 HOH HOH . 
V 7 HOH B 11 711 45 HOH HOH . 
V 7 HOH B 12 712 15 HOH HOH . 
V 7 HOH B 13 713 16 HOH HOH . 
V 7 HOH B 14 714 19 HOH HOH . 
V 7 HOH B 15 715 55 HOH HOH . 
V 7 HOH B 16 716 4 HOH HOH . 
V 7 HOH B 17 717 42 HOH HOH . 
V 7 HOH B 18 718 5 HOH HOH . 
V 7 HOH B 19 719 40 HOH HOH . 
V 7 HOH B 20 720 3 HOH HOH . 
V 7 HOH B 21 721 18 HOH HOH . 
V 7 HOH B 22 722 54 HOH HOH . 
V 7 HOH B 23 723 17 HOH HOH . 
V 7 HOH B 24 724 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P01 ELT . . . M 3 -1.447 -1.861 -4.501 1 33.76 ? P01 ELT 603 B 1 
HETATM 2 O O02 ELT . . . M 3 -1.735 -1.029 -5.703 1 31.77 ? O02 ELT 603 B 1 
HETATM 3 N N03 ELT . . . M 3 -1.408 -1.036 -3.087 1 56.36 ? N03 ELT 603 B 1 
HETATM 4 C C04 ELT . . . M 3 -0.997 0.321 -3.036 1 65.02 ? C04 ELT 603 B 1 
HETATM 5 C C05 ELT . . . M 3 -1.198 -1.829 -1.846 1 60.71 ? C05 ELT 603 B 1 
HETATM 6 O O06 ELT . . . M 3 -0.154 -2.802 -4.734 1 51.75 ? O06 ELT 603 B 1 
HETATM 7 C C07 ELT . . . M 3 0.62 -2.682 -5.916 1 67.93 ? C07 ELT 603 B 1 
HETATM 8 C C08 ELT . . . M 3 2.088 -2.362 -5.625 1 77.92 ? C08 ELT 603 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           238 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           8 
#