data_6G4P
#
_model_server_result.job_id            sbFAROn2cgGFnmkpnQsgzQ 
_model_server_result.datetime_utc      '2024-11-23 23:03:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g4p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":604}' 
#
_entry.id    6G4P 
#
_exptl.entry_id    6G4P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              424.923 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-[4-[(7-chloranyl-1,2,3,4-tetrahydroacridin-9-yl)amino]butyl]-2-[(~{Z})-hydroxyiminomethyl]pyridin-3-ol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6G4P 
_cell.length_a            91.51 
_cell.length_b            106.56 
_cell.length_c            150.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G4P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 67 A CYS 67 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 A SG CYS 254 A CYS 254 1_555 A SG CYS 265 A CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf3 A SG CYS 402 A CYS 402 1_555 A SG CYS 521 A CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf4 B SG CYS 67 B CYS 67 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf5 B SG CYS 254 B CYS 254 1_555 B SG CYS 265 B CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf6 B SG CYS 402 B CYS 402 1_555 B SG CYS 521 B CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
covale ? covale1 A ND2 ASN 59 A ASN 59 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale2 A OG SER 200 A SER 200 1_555 E P01 ELT . A ELT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? 
covale ? covale3 A ND2 ASN 416 A ASN 416 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale4 B ND2 ASN 59 B ASN 59 1_555 K C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale5 B OG SER 200 B SER 200 1_555 M P01 ELT . B ELT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.654 ? 
covale ? covale6 B ND2 ASN 416 B ASN 416 1_555 L C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.517 ? 
#
_chem_comp.formula           'C23 H25 Cl N4 O2' 
_chem_comp.formula_weight    424.923 
_chem_comp.id                JDS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-[4-[(7-chloranyl-1,2,3,4-tetrahydroacridin-9-yl)amino]butyl]-2-[(~{Z})-hydroxyiminomethyl]pyridin-3-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C14 JDS sing 193 n n 
C15 C16 JDS sing 194 n n 
C14 N02 JDS sing 195 n n 
N02 C09 JDS sing 196 n n 
C16 C17 JDS sing 197 n n 
CL1 C12 JDS sing 198 n n 
C17 C18 JDS sing 199 n n 
C09 C08 JDS doub 200 n y 
C09 C06 JDS sing 201 n y 
C13 C08 JDS sing 202 n y 
C13 C12 JDS doub 203 n y 
C05 C06 JDS sing 204 n n 
C05 C04 JDS sing 205 n n 
C08 C07 JDS sing 206 n y 
C12 C11 JDS sing 207 n y 
C06 C01 JDS doub 208 n y 
C04 C03 JDS sing 209 n n 
C18 N03 JDS doub 210 n y 
C18 C19 JDS sing 211 n y 
N03 C22 JDS sing 212 n y 
C07 C10 JDS sing 213 n y 
C07 N01 JDS doub 214 n y 
C11 C10 JDS doub 215 n y 
C01 N01 JDS sing 216 n y 
C01 C02 JDS sing 217 n n 
C03 C02 JDS sing 218 n n 
C19 C20 JDS doub 219 n y 
C22 C23 JDS sing 220 n n 
C22 C21 JDS doub 221 n y 
C23 N04 JDS doub 222 z n 
C20 C21 JDS sing 223 n y 
N04 O01 JDS sing 224 n n 
C21 O02 JDS sing 225 n n 
O01 H1 JDS sing 226 n n 
C02 H2 JDS sing 227 n n 
C02 H3 JDS sing 228 n n 
N02 H4 JDS sing 229 n n 
O02 H5 JDS sing 230 n n 
C03 H6 JDS sing 231 n n 
C03 H7 JDS sing 232 n n 
C04 H8 JDS sing 233 n n 
C04 H9 JDS sing 234 n n 
C05 H10 JDS sing 235 n n 
C05 H11 JDS sing 236 n n 
C10 H12 JDS sing 237 n n 
C11 H13 JDS sing 238 n n 
C13 H14 JDS sing 239 n n 
C14 H15 JDS sing 240 n n 
C14 H16 JDS sing 241 n n 
C15 H17 JDS sing 242 n n 
C15 H18 JDS sing 243 n n 
C16 H19 JDS sing 244 n n 
C16 H20 JDS sing 245 n n 
C17 H21 JDS sing 246 n n 
C17 H22 JDS sing 247 n n 
C19 H23 JDS sing 248 n n 
C20 H24 JDS sing 249 n n 
C23 H25 JDS sing 250 n n 
#
_atom_sites.entry_id                     6G4P 
_atom_sites.fract_transf_matrix[1][1]    0.010928 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009384 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006658 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 601 560 NAG NAG . 
D 2 NAG A 1 602 561 NAG NAG . 
E 3 ELT A 1 603 550 ELT TBN . 
F 4 JDS A 1 604 551 JDS JDS . 
G 5 CL A 1 605 1 CL CL . 
H 5 CL A 1 606 5 CL CL . 
I 5 CL A 1 607 8 CL CL . 
J 6 PG4 A 1 608 2 PG4 PG4 . 
K 2 NAG B 1 601 560 NAG NAG . 
L 2 NAG B 1 602 561 NAG NAG . 
M 3 ELT B 1 603 550 ELT TBN . 
N 4 JDS B 1 604 551 JDS JDS . 
O 5 CL B 1 605 2 CL CL . 
P 5 CL B 1 606 3 CL CL . 
Q 5 CL B 1 607 4 CL CL . 
R 5 CL B 1 608 6 CL CL . 
S 5 CL B 1 609 7 CL CL . 
T 6 PG4 B 1 610 1 PG4 PG4 . 
U 7 HOH A 1 701 38 HOH HOH . 
U 7 HOH A 2 702 26 HOH HOH . 
U 7 HOH A 3 703 51 HOH HOH . 
U 7 HOH A 4 704 27 HOH HOH . 
U 7 HOH A 5 705 36 HOH HOH . 
U 7 HOH A 6 706 8 HOH HOH . 
U 7 HOH A 7 707 35 HOH HOH . 
U 7 HOH A 8 708 37 HOH HOH . 
U 7 HOH A 9 709 10 HOH HOH . 
U 7 HOH A 10 710 11 HOH HOH . 
U 7 HOH A 11 711 34 HOH HOH . 
U 7 HOH A 12 712 29 HOH HOH . 
U 7 HOH A 13 713 39 HOH HOH . 
U 7 HOH A 14 714 50 HOH HOH . 
U 7 HOH A 15 715 49 HOH HOH . 
U 7 HOH A 16 716 46 HOH HOH . 
U 7 HOH A 17 717 32 HOH HOH . 
U 7 HOH A 18 718 12 HOH HOH . 
U 7 HOH A 19 719 9 HOH HOH . 
U 7 HOH A 20 720 33 HOH HOH . 
U 7 HOH A 21 721 25 HOH HOH . 
U 7 HOH A 22 722 24 HOH HOH . 
U 7 HOH A 23 723 52 HOH HOH . 
U 7 HOH A 24 724 53 HOH HOH . 
U 7 HOH A 25 725 31 HOH HOH . 
U 7 HOH A 26 726 28 HOH HOH . 
U 7 HOH A 27 727 14 HOH HOH . 
U 7 HOH A 28 728 57 HOH HOH . 
U 7 HOH A 29 729 13 HOH HOH . 
U 7 HOH A 30 730 30 HOH HOH . 
V 7 HOH B 1 701 7 HOH HOH . 
V 7 HOH B 2 702 47 HOH HOH . 
V 7 HOH B 3 703 20 HOH HOH . 
V 7 HOH B 4 704 23 HOH HOH . 
V 7 HOH B 5 705 48 HOH HOH . 
V 7 HOH B 6 706 22 HOH HOH . 
V 7 HOH B 7 707 56 HOH HOH . 
V 7 HOH B 8 708 44 HOH HOH . 
V 7 HOH B 9 709 6 HOH HOH . 
V 7 HOH B 10 710 21 HOH HOH . 
V 7 HOH B 11 711 45 HOH HOH . 
V 7 HOH B 12 712 15 HOH HOH . 
V 7 HOH B 13 713 16 HOH HOH . 
V 7 HOH B 14 714 19 HOH HOH . 
V 7 HOH B 15 715 55 HOH HOH . 
V 7 HOH B 16 716 4 HOH HOH . 
V 7 HOH B 17 717 42 HOH HOH . 
V 7 HOH B 18 718 5 HOH HOH . 
V 7 HOH B 19 719 40 HOH HOH . 
V 7 HOH B 20 720 3 HOH HOH . 
V 7 HOH B 21 721 18 HOH HOH . 
V 7 HOH B 22 722 54 HOH HOH . 
V 7 HOH B 23 723 17 HOH HOH . 
V 7 HOH B 24 724 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 CL CL1 JDS . . . F 4 -9.229 0.808 54.923 1 117.89 ? CL1 JDS 604 A 1 
HETATM 2 C C01 JDS . . . F 4 -9.353 5.913 50.785 1 78.81 ? C01 JDS 604 A 1 
HETATM 3 N N01 JDS . . . F 4 -8.442 4.961 50.896 1 87.5 ? N01 JDS 604 A 1 
HETATM 4 O O01 JDS . . . F 4 -9.08 1.28 48.933 1 68.98 ? O01 JDS 604 A 1 
HETATM 5 C C02 JDS . . . F 4 -9.318 6.762 49.523 1 81.38 ? C02 JDS 604 A 1 
HETATM 6 N N02 JDS . . . F 4 -11.158 5.495 54.161 1 76.73 ? N02 JDS 604 A 1 
HETATM 7 O O02 JDS . . . F 4 -11.98 4.075 48.805 1 81.32 ? O02 JDS 604 A 1 
HETATM 8 C C03 JDS . . . F 4 -10.488 7.739 49.37 1 92 ? C03 JDS 604 A 1 
HETATM 9 N N03 JDS . . . F 4 -12.417 2.663 52.153 1 76.24 ? N03 JDS 604 A 1 
HETATM 10 C C04 JDS . . . F 4 -10.797 8.385 50.681 1 87.56 ? C04 JDS 604 A 1 
HETATM 11 N N04 JDS . . . F 4 -9.966 2.246 49.295 1 82.74 ? N04 JDS 604 A 1 
HETATM 12 C C05 JDS . . . F 4 -11.254 7.311 51.606 1 76.04 ? C05 JDS 604 A 1 
HETATM 13 C C06 JDS . . . F 4 -10.292 6.204 51.853 1 74.02 ? C06 JDS 604 A 1 
HETATM 14 C C07 JDS . . . F 4 -8.651 4.013 51.875 1 95.58 ? C07 JDS 604 A 1 
HETATM 15 C C08 JDS . . . F 4 -9.521 4.22 52.955 1 87.13 ? C08 JDS 604 A 1 
HETATM 16 C C09 JDS . . . F 4 -10.226 5.456 53.06 1 76.04 ? C09 JDS 604 A 1 
HETATM 17 C C10 JDS . . . F 4 -7.96 2.768 51.783 1 106.05 ? C10 JDS 604 A 1 
HETATM 18 C C11 JDS . . . F 4 -8.149 1.797 52.724 1 108.61 ? C11 JDS 604 A 1 
HETATM 19 C C12 JDS . . . F 4 -9.018 2.031 53.776 1 108.7 ? C12 JDS 604 A 1 
HETATM 20 C C13 JDS . . . F 4 -9.701 3.205 53.911 1 96.25 ? C13 JDS 604 A 1 
HETATM 21 C C14 JDS . . . F 4 -12.202 6.508 54.626 1 67.9 ? C14 JDS 604 A 1 
HETATM 22 C C15 JDS . . . F 4 -13.681 5.933 54.822 1 58.96 ? C15 JDS 604 A 1 
HETATM 23 C C16 JDS . . . F 4 -13.801 4.375 55.22 1 49.06 ? C16 JDS 604 A 1 
HETATM 24 C C17 JDS . . . F 4 -13.969 3.243 54.112 1 44.82 ? C17 JDS 604 A 1 
HETATM 25 C C18 JDS . . . F 4 -13.416 3.479 52.662 1 57.83 ? C18 JDS 604 A 1 
HETATM 26 C C19 JDS . . . F 4 -13.959 4.509 51.872 1 57.24 ? C19 JDS 604 A 1 
HETATM 27 C C20 JDS . . . F 4 -13.493 4.731 50.589 1 72.17 ? C20 JDS 604 A 1 
HETATM 28 C C21 JDS . . . F 4 -12.489 3.918 50.07 1 83.31 ? C21 JDS 604 A 1 
HETATM 29 C C22 JDS . . . F 4 -11.948 2.879 50.867 1 84.8 ? C22 JDS 604 A 1 
HETATM 30 C C23 JDS . . . F 4 -10.85 2.013 50.264 1 85.41 ? C23 JDS 604 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           30 
#