data_6G4Q
#
_model_server_result.job_id            ZRjfoUjXGe0icetkzNowrw 
_model_server_result.datetime_utc      '2024-11-26 11:08:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g4q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    6G4Q 
#
_exptl.entry_id    6G4Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6G4Q 
_cell.length_a            130.2 
_cell.length_b            130.2 
_cell.length_c            119.772 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G4Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 259 A GLY 298 1_555 A N NEP 260 A NEP 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C NEP 260 A NEP 299 1_555 A N ALA 261 A ALA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6G4Q 
_atom_sites.fract_transf_matrix[1][1]    0.00768 
_atom_sites.fract_transf_matrix[1][2]    0.004434 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008869 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008349 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 401 2 EDO EDO . 
D 3 EDO A 1 402 3 EDO EDO . 
E 3 EDO A 1 403 4 EDO EDO . 
F 3 EDO A 1 404 5 EDO EDO . 
G 3 EDO A 1 405 7 EDO EDO . 
H 3 EDO A 1 406 8 EDO EDO . 
I 3 EDO A 1 407 14 EDO EDO . 
J 3 EDO B 1 501 16 EDO EDO . 
K 4 HOH A 1 501 45 HOH HOH . 
K 4 HOH A 2 502 65 HOH HOH . 
K 4 HOH A 3 503 104 HOH HOH . 
K 4 HOH A 4 504 126 HOH HOH . 
K 4 HOH A 5 505 93 HOH HOH . 
K 4 HOH A 6 506 110 HOH HOH . 
K 4 HOH A 7 507 113 HOH HOH . 
K 4 HOH A 8 508 44 HOH HOH . 
K 4 HOH A 9 509 25 HOH HOH . 
K 4 HOH A 10 510 48 HOH HOH . 
K 4 HOH A 11 511 63 HOH HOH . 
K 4 HOH A 12 512 50 HOH HOH . 
K 4 HOH A 13 513 68 HOH HOH . 
K 4 HOH A 14 514 42 HOH HOH . 
K 4 HOH A 15 515 85 HOH HOH . 
K 4 HOH A 16 516 19 HOH HOH . 
K 4 HOH A 17 517 1 HOH HOH . 
K 4 HOH A 18 518 99 HOH HOH . 
K 4 HOH A 19 519 11 HOH HOH . 
K 4 HOH A 20 520 114 HOH HOH . 
K 4 HOH A 21 521 27 HOH HOH . 
K 4 HOH A 22 522 31 HOH HOH . 
K 4 HOH A 23 523 32 HOH HOH . 
K 4 HOH A 24 524 43 HOH HOH . 
K 4 HOH A 25 525 117 HOH HOH . 
K 4 HOH A 26 526 121 HOH HOH . 
K 4 HOH A 27 527 108 HOH HOH . 
K 4 HOH A 28 528 125 HOH HOH . 
K 4 HOH A 29 529 56 HOH HOH . 
K 4 HOH A 30 530 67 HOH HOH . 
K 4 HOH A 31 531 103 HOH HOH . 
K 4 HOH A 32 532 3 HOH HOH . 
K 4 HOH A 33 533 124 HOH HOH . 
K 4 HOH A 34 534 107 HOH HOH . 
K 4 HOH A 35 535 131 HOH HOH . 
K 4 HOH A 36 536 66 HOH HOH . 
K 4 HOH A 37 537 105 HOH HOH . 
K 4 HOH A 38 538 71 HOH HOH . 
K 4 HOH A 39 539 69 HOH HOH . 
K 4 HOH A 40 540 132 HOH HOH . 
K 4 HOH A 41 541 143 HOH HOH . 
K 4 HOH A 42 542 28 HOH HOH . 
K 4 HOH A 43 543 81 HOH HOH . 
K 4 HOH A 44 544 79 HOH HOH . 
K 4 HOH A 45 545 23 HOH HOH . 
K 4 HOH A 46 546 24 HOH HOH . 
K 4 HOH A 47 547 83 HOH HOH . 
K 4 HOH A 48 548 80 HOH HOH . 
K 4 HOH A 49 549 21 HOH HOH . 
K 4 HOH A 50 550 8 HOH HOH . 
K 4 HOH A 51 551 82 HOH HOH . 
K 4 HOH A 52 552 100 HOH HOH . 
K 4 HOH A 53 553 15 HOH HOH . 
L 4 HOH B 1 601 101 HOH HOH . 
L 4 HOH B 2 602 46 HOH HOH . 
L 4 HOH B 3 603 39 HOH HOH . 
L 4 HOH B 4 604 38 HOH HOH . 
L 4 HOH B 5 605 106 HOH HOH . 
L 4 HOH B 6 606 122 HOH HOH . 
L 4 HOH B 7 607 147 HOH HOH . 
L 4 HOH B 8 608 95 HOH HOH . 
L 4 HOH B 9 609 37 HOH HOH . 
L 4 HOH B 10 610 144 HOH HOH . 
L 4 HOH B 11 611 118 HOH HOH . 
L 4 HOH B 12 612 138 HOH HOH . 
L 4 HOH B 13 613 135 HOH HOH . 
L 4 HOH B 14 614 145 HOH HOH . 
L 4 HOH B 15 615 115 HOH HOH . 
L 4 HOH B 16 616 140 HOH HOH . 
L 4 HOH B 17 617 9 HOH HOH . 
L 4 HOH B 18 618 128 HOH HOH . 
L 4 HOH B 19 619 152 HOH HOH . 
L 4 HOH B 20 620 10 HOH HOH . 
L 4 HOH B 21 621 151 HOH HOH . 
L 4 HOH B 22 622 139 HOH HOH . 
L 4 HOH B 23 623 134 HOH HOH . 
L 4 HOH B 24 624 6 HOH HOH . 
L 4 HOH B 25 625 35 HOH HOH . 
L 4 HOH B 26 626 70 HOH HOH . 
L 4 HOH B 27 627 136 HOH HOH . 
L 4 HOH B 28 628 7 HOH HOH . 
L 4 HOH B 29 629 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 3 -50.798 -7.448 25.152 1 67.4 ? C1 EDO 402 A 1 
HETATM 2 O O1 EDO . . . D 3 -49.615 -6.847 25.69 1 79.06 ? O1 EDO 402 A 1 
HETATM 3 C C2 EDO . . . D 3 -50.456 -8.127 23.834 1 76.03 ? C2 EDO 402 A 1 
HETATM 4 O O2 EDO . . . D 3 -49.471 -9.139 24.072 1 83.66 ? O2 EDO 402 A 1 
#
_model_server_stats.io_time_ms              85 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           553 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#