data_6G4R # _model_server_result.job_id xLNRTX35vShS8TVkH7NZPg _model_server_result.datetime_utc '2024-11-07 16:39:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 6G4R # _exptl.entry_id 6G4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 34.015 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'HYDROGEN PEROXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.02 _cell.angle_gamma 90 _cell.entry_id 6G4R _cell.length_a 71.216 _cell.length_b 56.991 _cell.length_c 154.182 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 21 B GLU 21 1_555 A N OCS 22 B OCS 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C OCS 22 B OCS 22 1_555 A N LYS 23 B LYS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C LEU 214 B LEU 214 1_555 A N CSO 215 B CSO 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C CSO 215 B CSO 215 1_555 A N ARG 216 B ARG 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B C LEU 214 A LEU 214 1_555 B N CSD 215 A CSD 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C CSD 215 A CSD 215 1_555 B N ARG 216 A ARG 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 C C GLU 21 E GLU 21 1_555 C N CSD 22 E CSD 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 C C CSD 22 E CSD 22 1_555 C N LYS 23 E LYS 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 D C LEU 214 G LEU 214 1_555 D N CSD 215 G CSD 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 D C CSD 215 G CSD 215 1_555 D N ARG 216 G ARG 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'H2 O2' _chem_comp.formula_weight 34.015 _chem_comp.id PEO _chem_comp.mon_nstd_flag . _chem_comp.name 'HYDROGEN PEROXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6G4R _atom_sites.fract_transf_matrix[1][1] 0.014042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001978 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 PEO B 1 401 2 PEO PEO . F 5 SO4 B 1 402 1 SO4 SO4 . G 6 EDO A 1 401 1 EDO EDO . H 4 PEO E 1 401 1 PEO PEO . I 4 PEO E 1 402 4 PEO PEO . J 7 HOH B 1 501 59 HOH HOH . J 7 HOH B 2 502 38 HOH HOH . J 7 HOH B 3 503 58 HOH HOH . J 7 HOH B 4 504 36 HOH HOH . J 7 HOH B 5 505 39 HOH HOH . J 7 HOH B 6 506 53 HOH HOH . J 7 HOH B 7 507 18 HOH HOH . J 7 HOH B 8 508 17 HOH HOH . J 7 HOH B 9 509 70 HOH HOH . J 7 HOH B 10 510 61 HOH HOH . J 7 HOH B 11 511 8 HOH HOH . J 7 HOH B 12 512 73 HOH HOH . J 7 HOH B 13 513 9 HOH HOH . J 7 HOH B 14 514 91 HOH HOH . J 7 HOH B 15 515 14 HOH HOH . J 7 HOH B 16 516 34 HOH HOH . J 7 HOH B 17 517 51 HOH HOH . J 7 HOH B 18 518 99 HOH HOH . J 7 HOH B 19 519 7 HOH HOH . J 7 HOH B 20 520 50 HOH HOH . J 7 HOH B 21 521 113 HOH HOH . J 7 HOH B 22 522 29 HOH HOH . J 7 HOH B 23 523 79 HOH HOH . J 7 HOH B 24 524 28 HOH HOH . J 7 HOH B 25 525 108 HOH HOH . J 7 HOH B 26 526 82 HOH HOH . J 7 HOH B 27 527 86 HOH HOH . J 7 HOH B 28 528 97 HOH HOH . J 7 HOH B 29 529 88 HOH HOH . J 7 HOH B 30 530 107 HOH HOH . J 7 HOH B 31 531 32 HOH HOH . J 7 HOH B 32 532 74 HOH HOH . K 7 HOH A 1 501 63 HOH HOH . K 7 HOH A 2 502 102 HOH HOH . K 7 HOH A 3 503 15 HOH HOH . K 7 HOH A 4 504 10 HOH HOH . K 7 HOH A 5 505 75 HOH HOH . K 7 HOH A 6 506 24 HOH HOH . K 7 HOH A 7 507 46 HOH HOH . K 7 HOH A 8 508 80 HOH HOH . K 7 HOH A 9 509 31 HOH HOH . K 7 HOH A 10 510 62 HOH HOH . K 7 HOH A 11 511 100 HOH HOH . K 7 HOH A 12 512 49 HOH HOH . K 7 HOH A 13 513 5 HOH HOH . K 7 HOH A 14 514 98 HOH HOH . K 7 HOH A 15 515 52 HOH HOH . K 7 HOH A 16 516 27 HOH HOH . K 7 HOH A 17 517 66 HOH HOH . K 7 HOH A 18 518 43 HOH HOH . K 7 HOH A 19 519 65 HOH HOH . K 7 HOH A 20 520 16 HOH HOH . K 7 HOH A 21 521 78 HOH HOH . K 7 HOH A 22 522 57 HOH HOH . K 7 HOH A 23 523 30 HOH HOH . K 7 HOH A 24 524 23 HOH HOH . K 7 HOH A 25 525 13 HOH HOH . K 7 HOH A 26 526 19 HOH HOH . K 7 HOH A 27 527 110 HOH HOH . K 7 HOH A 28 528 106 HOH HOH . K 7 HOH A 29 529 105 HOH HOH . K 7 HOH A 30 530 64 HOH HOH . K 7 HOH A 31 531 112 HOH HOH . K 7 HOH A 32 532 83 HOH HOH . K 7 HOH A 33 533 104 HOH HOH . K 7 HOH A 34 534 109 HOH HOH . K 7 HOH A 35 535 96 HOH HOH . L 7 HOH E 1 501 71 HOH HOH . L 7 HOH E 2 502 56 HOH HOH . L 7 HOH E 3 503 94 HOH HOH . L 7 HOH E 4 504 101 HOH HOH . L 7 HOH E 5 505 55 HOH HOH . L 7 HOH E 6 506 54 HOH HOH . L 7 HOH E 7 507 72 HOH HOH . L 7 HOH E 8 508 95 HOH HOH . L 7 HOH E 9 509 93 HOH HOH . L 7 HOH E 10 510 11 HOH HOH . L 7 HOH E 11 511 4 HOH HOH . L 7 HOH E 12 512 69 HOH HOH . L 7 HOH E 13 513 25 HOH HOH . L 7 HOH E 14 514 33 HOH HOH . L 7 HOH E 15 515 20 HOH HOH . L 7 HOH E 16 516 42 HOH HOH . L 7 HOH E 17 517 37 HOH HOH . L 7 HOH E 18 518 115 HOH HOH . L 7 HOH E 19 519 85 HOH HOH . L 7 HOH E 20 520 68 HOH HOH . M 7 HOH G 1 401 6 HOH HOH . M 7 HOH G 2 402 92 HOH HOH . M 7 HOH G 3 403 12 HOH HOH . M 7 HOH G 4 404 26 HOH HOH . M 7 HOH G 5 405 48 HOH HOH . M 7 HOH G 6 406 89 HOH HOH . M 7 HOH G 7 407 45 HOH HOH . M 7 HOH G 8 408 35 HOH HOH . M 7 HOH G 9 409 40 HOH HOH . M 7 HOH G 10 410 87 HOH HOH . M 7 HOH G 11 411 1 HOH HOH . M 7 HOH G 12 412 22 HOH HOH . M 7 HOH G 13 413 114 HOH HOH . M 7 HOH G 14 414 41 HOH HOH . M 7 HOH G 15 415 103 HOH HOH . M 7 HOH G 16 416 77 HOH HOH . M 7 HOH G 17 417 44 HOH HOH . M 7 HOH G 18 418 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PEO . . . H 4 -2.235 -7.547 -37.808 1 50.69 ? O1 PEO 401 E 1 HETATM 2 O O2 PEO . . . H 4 -2.206 -8.895 -37.401 1 52.51 ? O2 PEO 401 E 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 2 #