data_6G54
#
_model_server_result.job_id            Psbf43TA9NLeFX447Bq6og 
_model_server_result.datetime_utc      '2024-10-11 02:16:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g54 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    6G54 
#
_exptl.entry_id    6G54 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    13 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6G54 
_cell.length_a            91.751 
_cell.length_b            91.751 
_cell.length_c            99.305 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G54 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             167 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              166 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            D 
_struct_conn.ptnr2_label_atom_id            C31 
_struct_conn.ptnr2_label_comp_id            6H3 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             6H3 
_struct_conn.ptnr2_auth_seq_id              403 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.806 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 147 n n 
C1 C2 EDO sing 148 n n 
C1 H11 EDO sing 149 n n 
C1 H12 EDO sing 150 n n 
O1 HO1 EDO sing 151 n n 
C2 O2 EDO sing 152 n n 
C2 H21 EDO sing 153 n n 
C2 H22 EDO sing 154 n n 
O2 HO2 EDO sing 155 n n 
#
_atom_sites.entry_id                     6G54 
_atom_sites.fract_transf_matrix[1][1]    0.010899 
_atom_sites.fract_transf_matrix[1][2]    0.006293 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012585 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01007 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 401 1 SO4 SO4 . 
C 2 SO4 A 1 402 2 SO4 SO4 . 
D 3 6H3 A 1 403 1 6H3 ZZZ . 
E 4 EDO A 1 404 1 EDO EDO . 
F 4 EDO A 1 405 2 EDO EDO . 
G 4 EDO A 1 406 3 EDO EDO . 
H 4 EDO A 1 407 4 EDO EDO . 
I 4 EDO A 1 408 5 EDO EDO . 
J 4 EDO A 1 409 6 EDO EDO . 
K 4 EDO A 1 410 7 EDO EDO . 
L 4 EDO A 1 411 8 EDO EDO . 
M 4 EDO A 1 412 9 EDO EDO . 
N 4 EDO A 1 413 10 EDO EDO . 
O 4 EDO A 1 414 11 EDO EDO . 
P 4 EDO A 1 415 12 EDO EDO . 
Q 4 EDO A 1 416 13 EDO EDO . 
R 5 CL A 1 417 1 CL CL . 
S 6 HOH A 1 501 129 HOH HOH . 
S 6 HOH A 2 502 162 HOH HOH . 
S 6 HOH A 3 503 216 HOH HOH . 
S 6 HOH A 4 504 128 HOH HOH . 
S 6 HOH A 5 505 194 HOH HOH . 
S 6 HOH A 6 506 168 HOH HOH . 
S 6 HOH A 7 507 71 HOH HOH . 
S 6 HOH A 8 508 114 HOH HOH . 
S 6 HOH A 9 509 21 HOH HOH . 
S 6 HOH A 10 510 27 HOH HOH . 
S 6 HOH A 11 511 81 HOH HOH . 
S 6 HOH A 12 512 148 HOH HOH . 
S 6 HOH A 13 513 96 HOH HOH . 
S 6 HOH A 14 514 51 HOH HOH . 
S 6 HOH A 15 515 116 HOH HOH . 
S 6 HOH A 16 516 174 HOH HOH . 
S 6 HOH A 17 517 185 HOH HOH . 
S 6 HOH A 18 518 191 HOH HOH . 
S 6 HOH A 19 519 215 HOH HOH . 
S 6 HOH A 20 520 22 HOH HOH . 
S 6 HOH A 21 521 44 HOH HOH . 
S 6 HOH A 22 522 140 HOH HOH . 
S 6 HOH A 23 523 139 HOH HOH . 
S 6 HOH A 24 524 48 HOH HOH . 
S 6 HOH A 25 525 57 HOH HOH . 
S 6 HOH A 26 526 69 HOH HOH . 
S 6 HOH A 27 527 72 HOH HOH . 
S 6 HOH A 28 528 25 HOH HOH . 
S 6 HOH A 29 529 177 HOH HOH . 
S 6 HOH A 30 530 29 HOH HOH . 
S 6 HOH A 31 531 50 HOH HOH . 
S 6 HOH A 32 532 99 HOH HOH . 
S 6 HOH A 33 533 157 HOH HOH . 
S 6 HOH A 34 534 209 HOH HOH . 
S 6 HOH A 35 535 163 HOH HOH . 
S 6 HOH A 36 536 47 HOH HOH . 
S 6 HOH A 37 537 184 HOH HOH . 
S 6 HOH A 38 538 84 HOH HOH . 
S 6 HOH A 39 539 182 HOH HOH . 
S 6 HOH A 40 540 35 HOH HOH . 
S 6 HOH A 41 541 158 HOH HOH . 
S 6 HOH A 42 542 111 HOH HOH . 
S 6 HOH A 43 543 90 HOH HOH . 
S 6 HOH A 44 544 105 HOH HOH . 
S 6 HOH A 45 545 227 HOH HOH . 
S 6 HOH A 46 546 68 HOH HOH . 
S 6 HOH A 47 547 65 HOH HOH . 
S 6 HOH A 48 548 67 HOH HOH . 
S 6 HOH A 49 549 228 HOH HOH . 
S 6 HOH A 50 550 181 HOH HOH . 
S 6 HOH A 51 551 213 HOH HOH . 
S 6 HOH A 52 552 110 HOH HOH . 
S 6 HOH A 53 553 89 HOH HOH . 
S 6 HOH A 54 554 226 HOH HOH . 
S 6 HOH A 55 555 73 HOH HOH . 
S 6 HOH A 56 556 12 HOH HOH . 
S 6 HOH A 57 557 142 HOH HOH . 
S 6 HOH A 58 558 195 HOH HOH . 
S 6 HOH A 59 559 112 HOH HOH . 
S 6 HOH A 60 560 196 HOH HOH . 
S 6 HOH A 61 561 66 HOH HOH . 
S 6 HOH A 62 562 164 HOH HOH . 
S 6 HOH A 63 563 156 HOH HOH . 
S 6 HOH A 64 564 173 HOH HOH . 
S 6 HOH A 65 565 32 HOH HOH . 
S 6 HOH A 66 566 33 HOH HOH . 
S 6 HOH A 67 567 211 HOH HOH . 
S 6 HOH A 68 568 169 HOH HOH . 
S 6 HOH A 69 569 56 HOH HOH . 
S 6 HOH A 70 570 45 HOH HOH . 
S 6 HOH A 71 571 15 HOH HOH . 
S 6 HOH A 72 572 117 HOH HOH . 
S 6 HOH A 73 573 189 HOH HOH . 
S 6 HOH A 74 574 171 HOH HOH . 
S 6 HOH A 75 575 200 HOH HOH . 
S 6 HOH A 76 576 7 HOH HOH . 
S 6 HOH A 77 577 221 HOH HOH . 
S 6 HOH A 78 578 30 HOH HOH . 
S 6 HOH A 79 579 17 HOH HOH . 
S 6 HOH A 80 580 144 HOH HOH . 
S 6 HOH A 81 581 9 HOH HOH . 
S 6 HOH A 82 582 2 HOH HOH . 
S 6 HOH A 83 583 37 HOH HOH . 
S 6 HOH A 84 584 19 HOH HOH . 
S 6 HOH A 85 585 183 HOH HOH . 
S 6 HOH A 86 586 46 HOH HOH . 
S 6 HOH A 87 587 52 HOH HOH . 
S 6 HOH A 88 588 10 HOH HOH . 
S 6 HOH A 89 589 82 HOH HOH . 
S 6 HOH A 90 590 4 HOH HOH . 
S 6 HOH A 91 591 199 HOH HOH . 
S 6 HOH A 92 592 16 HOH HOH . 
S 6 HOH A 93 593 14 HOH HOH . 
S 6 HOH A 94 594 34 HOH HOH . 
S 6 HOH A 95 595 13 HOH HOH . 
S 6 HOH A 96 596 146 HOH HOH . 
S 6 HOH A 97 597 91 HOH HOH . 
S 6 HOH A 98 598 39 HOH HOH . 
S 6 HOH A 99 599 187 HOH HOH . 
S 6 HOH A 100 600 41 HOH HOH . 
S 6 HOH A 101 601 197 HOH HOH . 
S 6 HOH A 102 602 20 HOH HOH . 
S 6 HOH A 103 603 23 HOH HOH . 
S 6 HOH A 104 604 152 HOH HOH . 
S 6 HOH A 105 605 75 HOH HOH . 
S 6 HOH A 106 606 97 HOH HOH . 
S 6 HOH A 107 607 74 HOH HOH . 
S 6 HOH A 108 608 94 HOH HOH . 
S 6 HOH A 109 609 79 HOH HOH . 
S 6 HOH A 110 610 166 HOH HOH . 
S 6 HOH A 111 611 76 HOH HOH . 
S 6 HOH A 112 612 86 HOH HOH . 
S 6 HOH A 113 613 11 HOH HOH . 
S 6 HOH A 114 614 210 HOH HOH . 
S 6 HOH A 115 615 145 HOH HOH . 
S 6 HOH A 116 616 165 HOH HOH . 
S 6 HOH A 117 617 36 HOH HOH . 
S 6 HOH A 118 618 1 HOH HOH . 
S 6 HOH A 119 619 38 HOH HOH . 
S 6 HOH A 120 620 62 HOH HOH . 
S 6 HOH A 121 621 78 HOH HOH . 
S 6 HOH A 122 622 26 HOH HOH . 
S 6 HOH A 123 623 122 HOH HOH . 
S 6 HOH A 124 624 170 HOH HOH . 
S 6 HOH A 125 625 206 HOH HOH . 
S 6 HOH A 126 626 106 HOH HOH . 
S 6 HOH A 127 627 70 HOH HOH . 
S 6 HOH A 128 628 31 HOH HOH . 
S 6 HOH A 129 629 59 HOH HOH . 
S 6 HOH A 130 630 60 HOH HOH . 
S 6 HOH A 131 631 113 HOH HOH . 
S 6 HOH A 132 632 40 HOH HOH . 
S 6 HOH A 133 633 151 HOH HOH . 
S 6 HOH A 134 634 8 HOH HOH . 
S 6 HOH A 135 635 180 HOH HOH . 
S 6 HOH A 136 636 154 HOH HOH . 
S 6 HOH A 137 637 92 HOH HOH . 
S 6 HOH A 138 638 155 HOH HOH . 
S 6 HOH A 139 639 219 HOH HOH . 
S 6 HOH A 140 640 28 HOH HOH . 
S 6 HOH A 141 641 24 HOH HOH . 
S 6 HOH A 142 642 192 HOH HOH . 
S 6 HOH A 143 643 63 HOH HOH . 
S 6 HOH A 144 644 102 HOH HOH . 
S 6 HOH A 145 645 223 HOH HOH . 
S 6 HOH A 146 646 176 HOH HOH . 
S 6 HOH A 147 647 153 HOH HOH . 
S 6 HOH A 148 648 58 HOH HOH . 
S 6 HOH A 149 649 160 HOH HOH . 
S 6 HOH A 150 650 143 HOH HOH . 
S 6 HOH A 151 651 224 HOH HOH . 
S 6 HOH A 152 652 132 HOH HOH . 
S 6 HOH A 153 653 18 HOH HOH . 
S 6 HOH A 154 654 3 HOH HOH . 
S 6 HOH A 155 655 53 HOH HOH . 
S 6 HOH A 156 656 98 HOH HOH . 
S 6 HOH A 157 657 193 HOH HOH . 
S 6 HOH A 158 658 61 HOH HOH . 
S 6 HOH A 159 659 204 HOH HOH . 
S 6 HOH A 160 660 127 HOH HOH . 
S 6 HOH A 161 661 190 HOH HOH . 
S 6 HOH A 162 662 188 HOH HOH . 
S 6 HOH A 163 663 172 HOH HOH . 
S 6 HOH A 164 664 186 HOH HOH . 
S 6 HOH A 165 665 159 HOH HOH . 
S 6 HOH A 166 666 167 HOH HOH . 
S 6 HOH A 167 667 220 HOH HOH . 
S 6 HOH A 168 668 49 HOH HOH . 
S 6 HOH A 169 669 225 HOH HOH . 
S 6 HOH A 170 670 93 HOH HOH . 
S 6 HOH A 171 671 135 HOH HOH . 
S 6 HOH A 172 672 149 HOH HOH . 
S 6 HOH A 173 673 150 HOH HOH . 
S 6 HOH A 174 674 147 HOH HOH . 
S 6 HOH A 175 675 141 HOH HOH . 
S 6 HOH A 176 676 218 HOH HOH . 
S 6 HOH A 177 677 212 HOH HOH . 
S 6 HOH A 178 678 161 HOH HOH . 
S 6 HOH A 179 679 126 HOH HOH . 
S 6 HOH A 180 680 55 HOH HOH . 
S 6 HOH A 181 681 202 HOH HOH . 
S 6 HOH A 182 682 95 HOH HOH . 
S 6 HOH A 183 683 198 HOH HOH . 
S 6 HOH A 184 684 125 HOH HOH . 
S 6 HOH A 185 685 104 HOH HOH . 
S 6 HOH A 186 686 207 HOH HOH . 
S 6 HOH A 187 687 87 HOH HOH . 
S 6 HOH A 188 688 214 HOH HOH . 
S 6 HOH A 189 689 43 HOH HOH . 
S 6 HOH A 190 690 130 HOH HOH . 
S 6 HOH A 191 691 203 HOH HOH . 
S 6 HOH A 192 692 64 HOH HOH . 
S 6 HOH A 193 693 217 HOH HOH . 
S 6 HOH A 194 694 42 HOH HOH . 
S 6 HOH A 195 695 201 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 4 65.564 18.502 18.128 1 81.07 ? C1 EDO 404 A 1 
HETATM 2 O O1 EDO . . . E 4 66.531 19.05 17.215 1 78.77 ? O1 EDO 404 A 1 
HETATM 3 C C2 EDO . . . E 4 65.933 17.064 18.5 1 81.27 ? C2 EDO 404 A 1 
HETATM 4 O O2 EDO . . . E 4 66.772 16.465 17.498 1 80.82 ? O2 EDO 404 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#