data_6G5T # _model_server_result.job_id PXg5mJhMSmb7LORK8j6ogA _model_server_result.datetime_utc '2024-11-08 10:30:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g5t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6G5T # _exptl.entry_id 6G5T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G5T _cell.length_a 39.987 _cell.length_b 47.232 _cell.length_c 77.026 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G5T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 C O1 EDO . A EDO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6G5T _atom_sites.fract_transf_matrix[1][1] 0.025008 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012983 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 1 HEM HEM . C 3 EDO A 1 202 1 EDO EDO . D 4 HOH A 1 301 70 HOH HOH . D 4 HOH A 2 302 109 HOH HOH . D 4 HOH A 3 303 114 HOH HOH . D 4 HOH A 4 304 29 HOH HOH . D 4 HOH A 5 305 48 HOH HOH . D 4 HOH A 6 306 58 HOH HOH . D 4 HOH A 7 307 139 HOH HOH . D 4 HOH A 8 308 112 HOH HOH . D 4 HOH A 9 309 110 HOH HOH . D 4 HOH A 10 310 78 HOH HOH . D 4 HOH A 11 311 23 HOH HOH . D 4 HOH A 12 312 113 HOH HOH . D 4 HOH A 13 313 75 HOH HOH . D 4 HOH A 14 314 99 HOH HOH . D 4 HOH A 15 315 104 HOH HOH . D 4 HOH A 16 316 149 HOH HOH . D 4 HOH A 17 317 105 HOH HOH . D 4 HOH A 18 318 52 HOH HOH . D 4 HOH A 19 319 79 HOH HOH . D 4 HOH A 20 320 46 HOH HOH . D 4 HOH A 21 321 1 HOH HOH . D 4 HOH A 22 322 116 HOH HOH . D 4 HOH A 23 323 120 HOH HOH . D 4 HOH A 24 324 72 HOH HOH . D 4 HOH A 25 325 50 HOH HOH . D 4 HOH A 26 326 6 HOH HOH . D 4 HOH A 27 327 12 HOH HOH . D 4 HOH A 28 328 3 HOH HOH . D 4 HOH A 29 329 68 HOH HOH . D 4 HOH A 30 330 87 HOH HOH . D 4 HOH A 31 331 10 HOH HOH . D 4 HOH A 32 332 159 HOH HOH . D 4 HOH A 33 333 56 HOH HOH . D 4 HOH A 34 334 119 HOH HOH . D 4 HOH A 35 335 89 HOH HOH . D 4 HOH A 36 336 143 HOH HOH . D 4 HOH A 37 337 11 HOH HOH . D 4 HOH A 38 338 28 HOH HOH . D 4 HOH A 39 339 91 HOH HOH . D 4 HOH A 40 340 17 HOH HOH . D 4 HOH A 41 341 65 HOH HOH . D 4 HOH A 42 342 39 HOH HOH . D 4 HOH A 43 343 35 HOH HOH . D 4 HOH A 44 344 138 HOH HOH . D 4 HOH A 45 345 133 HOH HOH . D 4 HOH A 46 346 4 HOH HOH . D 4 HOH A 47 347 15 HOH HOH . D 4 HOH A 48 348 60 HOH HOH . D 4 HOH A 49 349 121 HOH HOH . D 4 HOH A 50 350 147 HOH HOH . D 4 HOH A 51 351 38 HOH HOH . D 4 HOH A 52 352 47 HOH HOH . D 4 HOH A 53 353 107 HOH HOH . D 4 HOH A 54 354 9 HOH HOH . D 4 HOH A 55 355 135 HOH HOH . D 4 HOH A 56 356 81 HOH HOH . D 4 HOH A 57 357 69 HOH HOH . D 4 HOH A 58 358 22 HOH HOH . D 4 HOH A 59 359 102 HOH HOH . D 4 HOH A 60 360 66 HOH HOH . D 4 HOH A 61 361 111 HOH HOH . D 4 HOH A 62 362 20 HOH HOH . D 4 HOH A 63 363 76 HOH HOH . D 4 HOH A 64 364 95 HOH HOH . D 4 HOH A 65 365 130 HOH HOH . D 4 HOH A 66 366 36 HOH HOH . D 4 HOH A 67 367 82 HOH HOH . D 4 HOH A 68 368 145 HOH HOH . D 4 HOH A 69 369 62 HOH HOH . D 4 HOH A 70 370 61 HOH HOH . D 4 HOH A 71 371 84 HOH HOH . D 4 HOH A 72 372 2 HOH HOH . D 4 HOH A 73 373 85 HOH HOH . D 4 HOH A 74 374 93 HOH HOH . D 4 HOH A 75 375 5 HOH HOH . D 4 HOH A 76 376 88 HOH HOH . D 4 HOH A 77 377 54 HOH HOH . D 4 HOH A 78 378 53 HOH HOH . D 4 HOH A 79 379 59 HOH HOH . D 4 HOH A 80 380 18 HOH HOH . D 4 HOH A 81 381 19 HOH HOH . D 4 HOH A 82 382 161 HOH HOH . D 4 HOH A 83 383 137 HOH HOH . D 4 HOH A 84 384 57 HOH HOH . D 4 HOH A 85 385 26 HOH HOH . D 4 HOH A 86 386 30 HOH HOH . D 4 HOH A 87 387 31 HOH HOH . D 4 HOH A 88 388 136 HOH HOH . D 4 HOH A 89 389 34 HOH HOH . D 4 HOH A 90 390 115 HOH HOH . D 4 HOH A 91 391 14 HOH HOH . D 4 HOH A 92 392 7 HOH HOH . D 4 HOH A 93 393 24 HOH HOH . D 4 HOH A 94 394 13 HOH HOH . D 4 HOH A 95 395 100 HOH HOH . D 4 HOH A 96 396 77 HOH HOH . D 4 HOH A 97 397 98 HOH HOH . D 4 HOH A 98 398 21 HOH HOH . D 4 HOH A 99 399 43 HOH HOH . D 4 HOH A 100 400 25 HOH HOH . D 4 HOH A 101 401 128 HOH HOH . D 4 HOH A 102 402 96 HOH HOH . D 4 HOH A 103 403 146 HOH HOH . D 4 HOH A 104 404 41 HOH HOH . D 4 HOH A 105 405 141 HOH HOH . D 4 HOH A 106 406 8 HOH HOH . D 4 HOH A 107 407 32 HOH HOH . D 4 HOH A 108 408 51 HOH HOH . D 4 HOH A 109 409 44 HOH HOH . D 4 HOH A 110 410 37 HOH HOH . D 4 HOH A 111 411 101 HOH HOH . D 4 HOH A 112 412 152 HOH HOH . D 4 HOH A 113 413 27 HOH HOH . D 4 HOH A 114 414 45 HOH HOH . D 4 HOH A 115 415 103 HOH HOH . D 4 HOH A 116 416 16 HOH HOH . D 4 HOH A 117 417 108 HOH HOH . D 4 HOH A 118 418 42 HOH HOH . D 4 HOH A 119 419 73 HOH HOH . D 4 HOH A 120 420 40 HOH HOH . D 4 HOH A 121 421 155 HOH HOH . D 4 HOH A 122 422 125 HOH HOH . D 4 HOH A 123 423 158 HOH HOH . D 4 HOH A 124 424 131 HOH HOH . D 4 HOH A 125 425 106 HOH HOH . D 4 HOH A 126 426 33 HOH HOH . D 4 HOH A 127 427 160 HOH HOH . D 4 HOH A 128 428 64 HOH HOH . D 4 HOH A 129 429 117 HOH HOH . D 4 HOH A 130 430 86 HOH HOH . D 4 HOH A 131 431 92 HOH HOH . D 4 HOH A 132 432 126 HOH HOH . D 4 HOH A 133 433 144 HOH HOH . D 4 HOH A 134 434 156 HOH HOH . D 4 HOH A 135 435 118 HOH HOH . D 4 HOH A 136 436 129 HOH HOH . D 4 HOH A 137 437 49 HOH HOH . D 4 HOH A 138 438 142 HOH HOH . D 4 HOH A 139 439 71 HOH HOH . D 4 HOH A 140 440 90 HOH HOH . D 4 HOH A 141 441 134 HOH HOH . D 4 HOH A 142 442 162 HOH HOH . D 4 HOH A 143 443 153 HOH HOH . D 4 HOH A 144 444 150 HOH HOH . D 4 HOH A 145 445 140 HOH HOH . D 4 HOH A 146 446 55 HOH HOH . D 4 HOH A 147 447 148 HOH HOH . D 4 HOH A 148 448 154 HOH HOH . D 4 HOH A 149 449 63 HOH HOH . D 4 HOH A 150 450 151 HOH HOH . D 4 HOH A 151 451 132 HOH HOH . D 4 HOH A 152 452 122 HOH HOH . D 4 HOH A 153 453 67 HOH HOH . D 4 HOH A 154 454 124 HOH HOH . D 4 HOH A 155 455 74 HOH HOH . D 4 HOH A 156 456 157 HOH HOH . D 4 HOH A 157 457 80 HOH HOH . D 4 HOH A 158 458 83 HOH HOH . D 4 HOH A 159 459 97 HOH HOH . D 4 HOH A 160 460 94 HOH HOH . D 4 HOH A 161 461 127 HOH HOH . D 4 HOH A 162 462 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -3.023 6.11 -10.081 0.74 21.3 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . C 3 -3.546 6.359 -8.784 0.74 18.02 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . C 3 -1.719 5.365 -9.882 0.74 31.13 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . C 3 -1.941 4.305 -8.947 0.74 26.01 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #