data_6G6V # _model_server_result.job_id JkvOuSnz_qGeBlgEgGitnw _model_server_result.datetime_utc '2025-08-31 11:43:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g6v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6G6V # _exptl.entry_id 6G6V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 315.234 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-carboxyphenyl)carbonyl-2-nitro-benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6G6V _cell.length_a 97.751 _cell.length_b 97.751 _cell.length_c 114.711 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 48.8755 84.654849 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -48.8755 84.654849 0 4 'crystal symmetry operation' 10_455 y-1/3,x+1/3,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 -48.8755 28.218283 38.237 5 'crystal symmetry operation' 11_565 x-y+2/3,-y+4/3,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 112.873132 38.237 6 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 48.8755 28.218283 38.237 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H9 N O7' _chem_comp.formula_weight 315.234 _chem_comp.id EO8 _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-carboxyphenyl)carbonyl-2-nitro-benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O17 C07 EO8 doub 83 n n C01 C02 EO8 doub 84 n y C01 C06 EO8 sing 85 n y C07 C06 EO8 sing 86 n n C07 C08 EO8 sing 87 n n C02 C03 EO8 sing 88 n y O15 C14 EO8 doub 89 n n C06 C05 EO8 doub 90 n y C08 C09 EO8 doub 91 n y C08 C13 EO8 sing 92 n y C09 C10 EO8 sing 93 n y C14 C13 EO8 sing 94 n n C14 O16 EO8 sing 95 n n O22 C21 EO8 doub 96 n n C13 C12 EO8 doub 97 n y C03 C21 EO8 sing 98 n n C03 C04 EO8 doub 99 n y C05 C04 EO8 sing 100 n y C10 C11 EO8 doub 101 n y C21 O23 EO8 sing 102 n n C12 C11 EO8 sing 103 n y C04 N18 EO8 sing 104 n n N18 O19 EO8 sing 105 n n N18 O20 EO8 doub 106 n n C10 H101 EO8 sing 107 n n C01 H011 EO8 sing 108 n n C02 H021 EO8 sing 109 n n C05 H051 EO8 sing 110 n n C09 H091 EO8 sing 111 n n C11 H111 EO8 sing 112 n n C12 H121 EO8 sing 113 n n O16 H1 EO8 sing 114 n n O23 H2 EO8 sing 115 n n # _atom_sites.entry_id 6G6V _atom_sites.fract_transf_matrix[1][1] 0.01023 _atom_sites.fract_transf_matrix[1][2] 0.005906 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EO8 A 1 201 1 EO8 LIG . C 3 HOH A 1 301 36 HOH HOH . C 3 HOH A 2 302 27 HOH HOH . C 3 HOH A 3 303 46 HOH HOH . C 3 HOH A 4 304 34 HOH HOH . C 3 HOH A 5 305 47 HOH HOH . C 3 HOH A 6 306 54 HOH HOH . C 3 HOH A 7 307 16 HOH HOH . C 3 HOH A 8 308 6 HOH HOH . C 3 HOH A 9 309 4 HOH HOH . C 3 HOH A 10 310 11 HOH HOH . C 3 HOH A 11 311 30 HOH HOH . C 3 HOH A 12 312 15 HOH HOH . C 3 HOH A 13 313 26 HOH HOH . C 3 HOH A 14 314 21 HOH HOH . C 3 HOH A 15 315 10 HOH HOH . C 3 HOH A 16 316 42 HOH HOH . C 3 HOH A 17 317 28 HOH HOH . C 3 HOH A 18 318 37 HOH HOH . C 3 HOH A 19 319 1 HOH HOH . C 3 HOH A 20 320 12 HOH HOH . C 3 HOH A 21 321 14 HOH HOH . C 3 HOH A 22 322 48 HOH HOH . C 3 HOH A 23 323 43 HOH HOH . C 3 HOH A 24 324 31 HOH HOH . C 3 HOH A 25 325 20 HOH HOH . C 3 HOH A 26 326 39 HOH HOH . C 3 HOH A 27 327 24 HOH HOH . C 3 HOH A 28 328 23 HOH HOH . C 3 HOH A 29 329 29 HOH HOH . C 3 HOH A 30 330 2 HOH HOH . C 3 HOH A 31 331 19 HOH HOH . C 3 HOH A 32 332 53 HOH HOH . C 3 HOH A 33 333 5 HOH HOH . C 3 HOH A 34 334 33 HOH HOH . C 3 HOH A 35 335 38 HOH HOH . C 3 HOH A 36 336 44 HOH HOH . C 3 HOH A 37 337 7 HOH HOH . C 3 HOH A 38 338 8 HOH HOH . C 3 HOH A 39 339 17 HOH HOH . C 3 HOH A 40 340 25 HOH HOH . C 3 HOH A 41 341 40 HOH HOH . C 3 HOH A 42 342 35 HOH HOH . C 3 HOH A 43 343 9 HOH HOH . C 3 HOH A 44 344 32 HOH HOH . C 3 HOH A 45 345 13 HOH HOH . C 3 HOH A 46 346 49 HOH HOH . C 3 HOH A 47 347 51 HOH HOH . C 3 HOH A 48 348 45 HOH HOH . C 3 HOH A 49 349 3 HOH HOH . C 3 HOH A 50 350 22 HOH HOH . C 3 HOH A 51 351 18 HOH HOH . C 3 HOH A 52 352 52 HOH HOH . C 3 HOH A 53 353 50 HOH HOH . C 3 HOH A 54 354 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 EO8 . . . B 2 -12.959 49.526 2.765 0.8 40.32 ? C10 EO8 201 A 1 HETATM 2 C C13 EO8 . . . B 2 -13.378 46.813 2.377 0.75 38.83 ? C13 EO8 201 A 1 HETATM 3 C C21 EO8 . . . B 2 -8.02 42.463 2.873 0.93 75.05 ? C21 EO8 201 A 1 HETATM 4 C C01 EO8 . . . B 2 -9.757 44.824 0.539 0.71 54.71 ? C01 EO8 201 A 1 HETATM 5 C C02 EO8 . . . B 2 -8.968 43.811 1.061 0.83 59.53 ? C02 EO8 201 A 1 HETATM 6 C C03 EO8 . . . B 2 -8.897 43.586 2.429 1 60.68 ? C03 EO8 201 A 1 HETATM 7 C C04 EO8 . . . B 2 -9.636 44.394 3.297 0.66 52.39 ? C04 EO8 201 A 1 HETATM 8 C C05 EO8 . . . B 2 -10.419 45.409 2.754 1 49.32 ? C05 EO8 201 A 1 HETATM 9 C C06 EO8 . . . B 2 -10.484 45.631 1.389 0.85 52.32 ? C06 EO8 201 A 1 HETATM 10 C C07 EO8 . . . B 2 -11.339 46.73 0.84 0.68 54.24 ? C07 EO8 201 A 1 HETATM 11 C C08 EO8 . . . B 2 -12.302 47.442 1.741 0.92 45.21 ? C08 EO8 201 A 1 HETATM 12 C C09 EO8 . . . B 2 -12.109 48.804 1.945 0.86 45.54 ? C09 EO8 201 A 1 HETATM 13 C C11 EO8 . . . B 2 -14.015 48.897 3.397 0.61 44.21 ? C11 EO8 201 A 1 HETATM 14 C C12 EO8 . . . B 2 -14.222 47.544 3.2 0.65 42.35 ? C12 EO8 201 A 1 HETATM 15 C C14 EO8 . . . B 2 -13.687 45.363 2.235 0.64 40.19 ? C14 EO8 201 A 1 HETATM 16 O O15 EO8 . . . B 2 -13.332 44.737 1.202 0.83 45.59 ? O15 EO8 201 A 1 HETATM 17 O O16 EO8 . . . B 2 -14.319 44.785 3.161 1 35.58 -1 O16 EO8 201 A 1 HETATM 18 O O17 EO8 . . . B 2 -11.241 47.033 -0.341 0.9 57.37 ? O17 EO8 201 A 1 HETATM 19 N N18 EO8 . . . B 2 -9.657 44.267 4.733 0.76 52.84 ? N18 EO8 201 A 1 HETATM 20 O O19 EO8 . . . B 2 -9.391 43.225 5.315 0.83 54.14 ? O19 EO8 201 A 1 HETATM 21 O O20 EO8 . . . B 2 -9.971 45.236 5.407 0.78 52.46 ? O20 EO8 201 A 1 HETATM 22 O O22 EO8 . . . B 2 -8.145 41.329 2.334 0.07 80.15 -1 O22 EO8 201 A 1 HETATM 23 O O23 EO8 . . . B 2 -7.156 42.644 3.772 0.46 82.27 ? O23 EO8 201 A 1 HETATM 24 H H101 EO8 . . . B 2 -12.81 50.475 2.901 0.8 48.39 ? H101 EO8 201 A 1 HETATM 25 H H011 EO8 . . . B 2 -9.791 44.97 -0.419 0.71 65.66 ? H011 EO8 201 A 1 HETATM 26 H H021 EO8 . . . B 2 -8.457 43.249 0.46 0.83 71.43 ? H021 EO8 201 A 1 HETATM 27 H H051 EO8 . . . B 2 -10.936 45.977 3.348 1 59.18 ? H051 EO8 201 A 1 HETATM 28 H H091 EO8 . . . B 2 -11.37 49.256 1.512 0.86 54.65 ? H091 EO8 201 A 1 HETATM 29 H H111 EO8 . . . B 2 -14.612 49.403 3.969 0.61 53.05 ? H111 EO8 201 A 1 HETATM 30 H H121 EO8 . . . B 2 -14.966 47.103 3.639 0.65 50.82 ? H121 EO8 201 A 1 # _model_server_stats.io_time_ms 104 _model_server_stats.parse_time_ms 198 _model_server_stats.create_model_time_ms 92 _model_server_stats.query_time_ms 434 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #