data_6G78
#
_model_server_result.job_id            P7Mpey8yUjRMwPKFSyQxig 
_model_server_result.datetime_utc      '2024-10-19 11:41:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g78 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    6G78 
#
_exptl.entry_id    6G78 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.22 
_cell.angle_gamma         90 
_cell.entry_id            6G78 
_cell.length_a            52.015 
_cell.length_b            110.614 
_cell.length_c            66.559 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G78 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     6G78 
_atom_sites.fract_transf_matrix[1][1]    0.019225 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000074 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00904 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015024 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ANP A 1 401 2 ANP ANP . 
D 2 ANP B 1 401 4 ANP ANP . 
E 3 HOH A 1 501 71 HOH HOH . 
E 3 HOH A 2 502 42 HOH HOH . 
E 3 HOH A 3 503 40 HOH HOH . 
E 3 HOH A 4 504 3 HOH HOH . 
E 3 HOH A 5 505 49 HOH HOH . 
E 3 HOH A 6 506 22 HOH HOH . 
E 3 HOH A 7 507 84 HOH HOH . 
E 3 HOH A 8 508 35 HOH HOH . 
E 3 HOH A 9 509 68 HOH HOH . 
E 3 HOH A 10 510 59 HOH HOH . 
E 3 HOH A 11 511 48 HOH HOH . 
E 3 HOH A 12 512 103 HOH HOH . 
E 3 HOH A 13 513 2 HOH HOH . 
E 3 HOH A 14 514 12 HOH HOH . 
E 3 HOH A 15 515 57 HOH HOH . 
E 3 HOH A 16 516 52 HOH HOH . 
E 3 HOH A 17 517 9 HOH HOH . 
E 3 HOH A 18 518 15 HOH HOH . 
E 3 HOH A 19 519 25 HOH HOH . 
E 3 HOH A 20 520 115 HOH HOH . 
E 3 HOH A 21 521 36 HOH HOH . 
E 3 HOH A 22 522 65 HOH HOH . 
E 3 HOH A 23 523 83 HOH HOH . 
E 3 HOH A 24 524 75 HOH HOH . 
E 3 HOH A 25 525 54 HOH HOH . 
E 3 HOH A 26 526 106 HOH HOH . 
E 3 HOH A 27 527 104 HOH HOH . 
E 3 HOH A 28 528 62 HOH HOH . 
E 3 HOH A 29 529 28 HOH HOH . 
E 3 HOH A 30 530 91 HOH HOH . 
E 3 HOH A 31 531 6 HOH HOH . 
E 3 HOH A 32 532 66 HOH HOH . 
E 3 HOH A 33 533 1 HOH HOH . 
E 3 HOH A 34 534 80 HOH HOH . 
E 3 HOH A 35 535 74 HOH HOH . 
E 3 HOH A 36 536 102 HOH HOH . 
E 3 HOH A 37 537 18 HOH HOH . 
E 3 HOH A 38 538 46 HOH HOH . 
E 3 HOH A 39 539 97 HOH HOH . 
F 3 HOH B 1 501 79 HOH HOH . 
F 3 HOH B 2 502 69 HOH HOH . 
F 3 HOH B 3 503 39 HOH HOH . 
F 3 HOH B 4 504 108 HOH HOH . 
F 3 HOH B 5 505 110 HOH HOH . 
F 3 HOH B 6 506 8 HOH HOH . 
F 3 HOH B 7 507 26 HOH HOH . 
F 3 HOH B 8 508 34 HOH HOH . 
F 3 HOH B 9 509 99 HOH HOH . 
F 3 HOH B 10 510 70 HOH HOH . 
F 3 HOH B 11 511 33 HOH HOH . 
F 3 HOH B 12 512 100 HOH HOH . 
F 3 HOH B 13 513 7 HOH HOH . 
F 3 HOH B 14 514 4 HOH HOH . 
F 3 HOH B 15 515 50 HOH HOH . 
F 3 HOH B 16 516 96 HOH HOH . 
F 3 HOH B 17 517 29 HOH HOH . 
F 3 HOH B 18 518 13 HOH HOH . 
F 3 HOH B 19 519 55 HOH HOH . 
F 3 HOH B 20 520 67 HOH HOH . 
F 3 HOH B 21 521 53 HOH HOH . 
F 3 HOH B 22 522 107 HOH HOH . 
F 3 HOH B 23 523 37 HOH HOH . 
F 3 HOH B 24 524 11 HOH HOH . 
F 3 HOH B 25 525 56 HOH HOH . 
F 3 HOH B 26 526 98 HOH HOH . 
F 3 HOH B 27 527 82 HOH HOH . 
F 3 HOH B 28 528 86 HOH HOH . 
F 3 HOH B 29 529 81 HOH HOH . 
F 3 HOH B 30 530 118 HOH HOH . 
F 3 HOH B 31 531 60 HOH HOH . 
F 3 HOH B 32 532 10 HOH HOH . 
F 3 HOH B 33 533 78 HOH HOH . 
F 3 HOH B 34 534 14 HOH HOH . 
F 3 HOH B 35 535 113 HOH HOH . 
F 3 HOH B 36 536 58 HOH HOH . 
F 3 HOH B 37 537 72 HOH HOH . 
F 3 HOH B 38 538 5 HOH HOH . 
F 3 HOH B 39 539 73 HOH HOH . 
F 3 HOH B 40 540 111 HOH HOH . 
F 3 HOH B 41 541 112 HOH HOH . 
F 3 HOH B 42 542 105 HOH HOH . 
F 3 HOH B 43 543 41 HOH HOH . 
F 3 HOH B 44 544 20 HOH HOH . 
F 3 HOH B 45 545 44 HOH HOH . 
F 3 HOH B 46 546 95 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . C 2 -6.261 -49.978 -17.811 1 85.07 ? PG ANP 401 A 1 
HETATM 2 O O1G ANP . . . C 2 -7.288 -50.629 -18.706 1 62.49 ? O1G ANP 401 A 1 
HETATM 3 O O2G ANP . . . C 2 -5.047 -49.466 -18.548 1 59.08 ? O2G ANP 401 A 1 
HETATM 4 O O3G ANP . . . C 2 -5.932 -50.78 -16.575 1 66.84 ? O3G ANP 401 A 1 
HETATM 5 P PB ANP . . . C 2 -8.346 -48.676 -16.038 1 56.63 ? PB ANP 401 A 1 
HETATM 6 O O1B ANP . . . C 2 -8.49 -50.133 -15.668 1 54.56 ? O1B ANP 401 A 1 
HETATM 7 O O2B ANP . . . C 2 -8.092 -47.677 -14.935 1 44.71 ? O2B ANP 401 A 1 
HETATM 8 N N3B ANP . . . C 2 -7.051 -48.538 -17.206 1 65.94 ? N3B ANP 401 A 1 
HETATM 9 P PA ANP . . . C 2 -9.695 -47.463 -18.164 1 49.53 ? PA ANP 401 A 1 
HETATM 10 O O1A ANP . . . C 2 -8.783 -48.218 -19.102 1 48.92 ? O1A ANP 401 A 1 
HETATM 11 O O2A ANP . . . C 2 -9.451 -45.998 -17.893 1 46.94 ? O2A ANP 401 A 1 
HETATM 12 O O3A ANP . . . C 2 -9.72 -48.24 -16.754 1 49.21 ? O3A ANP 401 A 1 
HETATM 13 O O5' ANP . . . C 2 -11.208 -47.633 -18.687 1 51.84 ? O5' ANP 401 A 1 
HETATM 14 C C5' ANP . . . C 2 -12.1 -48.539 -18.041 1 46.8 ? C5' ANP 401 A 1 
HETATM 15 C C4' ANP . . . C 2 -13.461 -48.484 -18.723 1 45.15 ? C4' ANP 401 A 1 
HETATM 16 O O4' ANP . . . C 2 -14.247 -47.436 -18.149 1 48.12 ? O4' ANP 401 A 1 
HETATM 17 C C3' ANP . . . C 2 -13.321 -48.203 -20.212 1 45.1 ? C3' ANP 401 A 1 
HETATM 18 O O3' ANP . . . C 2 -13.831 -49.312 -20.964 1 50.13 ? O3' ANP 401 A 1 
HETATM 19 C C2' ANP . . . C 2 -14.086 -46.911 -20.472 1 47.2 ? C2' ANP 401 A 1 
HETATM 20 O O2' ANP . . . C 2 -15.158 -47.08 -21.409 1 44.3 ? O2' ANP 401 A 1 
HETATM 21 C C1' ANP . . . C 2 -14.644 -46.472 -19.127 1 43.57 ? C1' ANP 401 A 1 
HETATM 22 N N9 ANP . . . C 2 -14.095 -45.14 -18.769 1 44.73 ? N9 ANP 401 A 1 
HETATM 23 C C8 ANP . . . C 2 -12.887 -44.908 -18.222 1 37.36 ? C8 ANP 401 A 1 
HETATM 24 N N7 ANP . . . C 2 -12.688 -43.581 -18.017 1 32.73 ? N7 ANP 401 A 1 
HETATM 25 C C5 ANP . . . C 2 -13.792 -42.938 -18.439 1 34.91 ? C5 ANP 401 A 1 
HETATM 26 C C6 ANP . . . C 2 -14.246 -41.529 -18.509 1 32.6 ? C6 ANP 401 A 1 
HETATM 27 N N6 ANP . . . C 2 -13.458 -40.516 -18.075 1 33.98 ? N6 ANP 401 A 1 
HETATM 28 N N1 ANP . . . C 2 -15.474 -41.288 -19.021 1 32 ? N1 ANP 401 A 1 
HETATM 29 C C2 ANP . . . C 2 -16.267 -42.285 -19.456 1 33.18 ? C2 ANP 401 A 1 
HETATM 30 N N3 ANP . . . C 2 -15.92 -43.584 -19.422 1 35.26 ? N3 ANP 401 A 1 
HETATM 31 C C4 ANP . . . C 2 -14.717 -43.97 -18.933 1 39.07 ? C4 ANP 401 A 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           31 
#