data_6G79 # _model_server_result.job_id 0btoOuO6sVQO7GBzukedcQ _model_server_result.datetime_utc '2024-12-23 05:29:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g79 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 6G79 # _exptl.entry_id 6G79 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 404.485 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[5-[2-[4-(4-cyanophenyl)piperazin-1-yl]-2-oxidanylidene-ethoxy]-1~{H}-indol-3-yl]ethylazanium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G79 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 90 _struct_conn.ptnr1_auth_asym_id S _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 122 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 167 _struct_conn.ptnr2_auth_asym_id S _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 199 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.032 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C23 H26 N5 O2 1' _chem_comp.formula_weight 404.485 _chem_comp.id EP5 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[5-[2-[4-(4-cyanophenyl)piperazin-1-yl]-2-oxidanylidene-ethoxy]-1~{H}-indol-3-yl]ethylazanium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C11 EP5 doub 83 n n C C1 EP5 sing 84 n n C N1 EP5 sing 85 n n C9 C8 EP5 doub 86 n y C9 C4 EP5 sing 87 n y C8 C7 EP5 sing 88 n y C1 N EP5 sing 89 n n C11 N EP5 sing 90 n n C11 C12 EP5 sing 91 n n N1 C4 EP5 sing 92 n n N1 C3 EP5 sing 93 n n C4 C5 EP5 doub 94 n y N C2 EP5 sing 95 n n C7 C10 EP5 sing 96 n n C7 C6 EP5 doub 97 n y C10 N2 EP5 trip 98 n n O1 C12 EP5 sing 99 n n O1 C13 EP5 sing 100 n n C3 C2 EP5 sing 101 n n C13 C14 EP5 doub 102 n y C13 C18 EP5 sing 103 n y C14 C15 EP5 sing 104 n y C5 C6 EP5 sing 105 n y C18 C17 EP5 doub 106 n y C15 C16 EP5 doub 107 n y C15 C20 EP5 sing 108 n y C17 C16 EP5 sing 109 n y C21 C20 EP5 sing 110 n n C21 C22 EP5 sing 111 n n C16 N3 EP5 sing 112 n y C20 C19 EP5 doub 113 n y C22 N4 EP5 sing 114 n n N3 C19 EP5 sing 115 n y C8 H1 EP5 sing 116 n n C9 H2 EP5 sing 117 n n C6 H3 EP5 sing 118 n n C5 H4 EP5 sing 119 n n C H5 EP5 sing 120 n n C H6 EP5 sing 121 n n C1 H7 EP5 sing 122 n n C1 H8 EP5 sing 123 n n C3 H9 EP5 sing 124 n n C3 H10 EP5 sing 125 n n C2 H11 EP5 sing 126 n n C2 H12 EP5 sing 127 n n C12 H13 EP5 sing 128 n n C12 H14 EP5 sing 129 n n C14 H15 EP5 sing 130 n n C17 H16 EP5 sing 131 n n C18 H17 EP5 sing 132 n n C19 H18 EP5 sing 133 n n N3 H19 EP5 sing 134 n n C21 H20 EP5 sing 135 n n C21 H21 EP5 sing 136 n n C22 H22 EP5 sing 137 n n C22 H23 EP5 sing 138 n n N4 H24 EP5 sing 139 n n N4 H25 EP5 sing 140 n n N4 H26 EP5 sing 141 n n # _atom_sites.entry_id 6G79 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id EP5 _pdbx_nonpoly_scheme.pdb_strand_id S _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id EP5 _pdbx_nonpoly_scheme.auth_mon_id don _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N2 EP5 . . . E 5 94.892 43.895 63.995 1 147.21 ? N2 EP5 401 S 1 HETATM 2 C C10 EP5 . . . E 5 95.112 45.037 63.976 1 145.2 ? C10 EP5 401 S 1 HETATM 3 C C7 EP5 . . . E 5 95.368 46.291 63.867 1 141.65 ? C7 EP5 401 S 1 HETATM 4 C C8 EP5 . . . E 5 95.078 46.968 62.684 1 138 ? C8 EP5 401 S 1 HETATM 5 C C9 EP5 . . . E 5 95.356 48.332 62.574 1 132.03 ? C9 EP5 401 S 1 HETATM 6 C C6 EP5 . . . E 5 95.94 46.985 64.934 1 139.23 ? C6 EP5 401 S 1 HETATM 7 C C5 EP5 . . . E 5 96.223 48.346 64.825 1 133.75 ? C5 EP5 401 S 1 HETATM 8 C C4 EP5 . . . E 5 95.931 49.038 63.646 1 128.09 ? C4 EP5 401 S 1 HETATM 9 N N1 EP5 . . . E 5 96.226 50.413 63.537 1 121.37 ? N1 EP5 401 S 1 HETATM 10 C C EP5 . . . E 5 96.838 50.945 62.329 1 121.12 ? C EP5 401 S 1 HETATM 11 C C1 EP5 . . . E 5 98.176 51.526 62.752 1 119 ? C1 EP5 401 S 1 HETATM 12 C C3 EP5 . . . E 5 95.957 51.381 64.603 1 113.53 ? C3 EP5 401 S 1 HETATM 13 C C2 EP5 . . . E 5 97.266 52.097 64.916 1 111.1 ? C2 EP5 401 S 1 HETATM 14 N N EP5 . . . E 5 97.819 52.615 63.66 1 113.36 ? N EP5 401 S 1 HETATM 15 C C11 EP5 . . . E 5 97.988 53.907 63.317 1 109.55 ? C11 EP5 401 S 1 HETATM 16 O O EP5 . . . E 5 98.259 54.252 62.176 1 107.48 ? O EP5 401 S 1 HETATM 17 C C12 EP5 . . . E 5 97.848 55.027 64.323 1 106.63 ? C12 EP5 401 S 1 HETATM 18 O O1 EP5 . . . E 5 96.601 55.681 64.068 1 99.53 ? O1 EP5 401 S 1 HETATM 19 C C13 EP5 . . . E 5 96.229 56.891 64.606 1 94.23 ? C13 EP5 401 S 1 HETATM 20 C C14 EP5 . . . E 5 94.862 57.121 64.805 1 89.5 ? C14 EP5 401 S 1 HETATM 21 C C15 EP5 . . . E 5 94.456 58.339 65.342 1 85.5 ? C15 EP5 401 S 1 HETATM 22 C C16 EP5 . . . E 5 95.447 59.377 65.689 1 85.67 ? C16 EP5 401 S 1 HETATM 23 C C17 EP5 . . . E 5 96.793 59.111 65.473 1 86.67 ? C17 EP5 401 S 1 HETATM 24 C C18 EP5 . . . E 5 97.176 57.881 64.936 1 90.67 ? C18 EP5 401 S 1 HETATM 25 C C20 EP5 . . . E 5 93.139 58.915 65.694 1 83.7 ? C20 EP5 401 S 1 HETATM 26 C C19 EP5 . . . E 5 93.429 60.188 66.191 1 86.34 ? C19 EP5 401 S 1 HETATM 27 N N3 EP5 . . . E 5 94.767 60.431 66.184 1 85.75 ? N3 EP5 401 S 1 HETATM 28 C C21 EP5 . . . E 5 91.764 58.295 65.529 1 80.89 ? C21 EP5 401 S 1 HETATM 29 C C22 EP5 . . . E 5 91.684 56.87 66.06 1 80.18 ? C22 EP5 401 S 1 HETATM 30 N N4 EP5 . . . E 5 90.299 56.51 66.407 1 81.43 ? N4 EP5 401 S 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #