data_6G80
#
_model_server_result.job_id            lPgdW8J6z9iycGaHsRoYOw 
_model_server_result.datetime_utc      '2024-11-13 06:01:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6g80 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":301}' 
#
_entry.id    6G80 
#
_exptl.entry_id    6G80 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYL-L-HOMOCYSTEINE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6G80 
_cell.length_a            117.15 
_cell.length_b            119.72 
_cell.length_c            145 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6G80 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
D,H,L 2 1 
C,G,K 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x+1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 58.575 59.86 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C14 H20 N6 O5 S' 
_chem_comp.formula_weight    384.411 
_chem_comp.id                SAH 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              S-ADENOSYL-L-HOMOCYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAH sing 290 n n 
N HN1 SAH sing 291 n n 
N HN2 SAH sing 292 n n 
CA CB SAH sing 293 n n 
CA C SAH sing 294 n n 
CA HA SAH sing 295 n n 
CB CG SAH sing 296 n n 
CB HB1 SAH sing 297 n n 
CB HB2 SAH sing 298 n n 
CG SD SAH sing 299 n n 
CG HG1 SAH sing 300 n n 
CG HG2 SAH sing 301 n n 
SD C5' SAH sing 302 n n 
C O SAH doub 303 n n 
C OXT SAH sing 304 n n 
OXT HXT SAH sing 305 n n 
C5' C4' SAH sing 306 n n 
C5' "H5'1" SAH sing 307 n n 
C5' "H5'2" SAH sing 308 n n 
C4' O4' SAH sing 309 n n 
C4' C3' SAH sing 310 n n 
C4' H4' SAH sing 311 n n 
O4' C1' SAH sing 312 n n 
C3' O3' SAH sing 313 n n 
C3' C2' SAH sing 314 n n 
C3' H3' SAH sing 315 n n 
O3' HO3' SAH sing 316 n n 
C2' O2' SAH sing 317 n n 
C2' C1' SAH sing 318 n n 
C2' H2' SAH sing 319 n n 
O2' HO2' SAH sing 320 n n 
C1' N9 SAH sing 321 n n 
C1' H1' SAH sing 322 n n 
N9 C8 SAH sing 323 n y 
N9 C4 SAH sing 324 n y 
C8 N7 SAH doub 325 n y 
C8 H8 SAH sing 326 n n 
N7 C5 SAH sing 327 n y 
C5 C6 SAH sing 328 n y 
C5 C4 SAH doub 329 n y 
C6 N6 SAH sing 330 n n 
C6 N1 SAH doub 331 n y 
N6 HN61 SAH sing 332 n n 
N6 HN62 SAH sing 333 n n 
N1 C2 SAH sing 334 n y 
C2 N3 SAH doub 335 n y 
C2 H2 SAH sing 336 n n 
N3 C4 SAH sing 337 n y 
#
_atom_sites.entry_id                     6G80 
_atom_sites.fract_transf_matrix[1][1]    0.008536 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008353 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006897 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SAH A 1 301 1 SAH SAH . 
F 3 GOL B 1 301 1 GOL GOL . 
G 2 SAH M 1 301 5 SAH SAH . 
H 2 SAH C 1 301 3 SAH SAH . 
I 4 HOH A 1 401 12 HOH HOH . 
I 4 HOH A 2 402 6 HOH HOH . 
I 4 HOH A 3 403 19 HOH HOH . 
I 4 HOH A 4 404 14 HOH HOH . 
I 4 HOH A 5 405 124 HOH HOH . 
I 4 HOH A 6 406 26 HOH HOH . 
I 4 HOH A 7 407 125 HOH HOH . 
I 4 HOH A 8 408 20 HOH HOH . 
I 4 HOH A 9 409 22 HOH HOH . 
I 4 HOH A 10 410 2 HOH HOH . 
I 4 HOH A 11 411 23 HOH HOH . 
I 4 HOH A 12 412 126 HOH HOH . 
I 4 HOH A 13 413 121 HOH HOH . 
I 4 HOH A 14 414 10 HOH HOH . 
I 4 HOH A 15 415 8 HOH HOH . 
I 4 HOH A 16 416 17 HOH HOH . 
I 4 HOH A 17 417 5 HOH HOH . 
I 4 HOH A 18 418 3 HOH HOH . 
I 4 HOH A 19 419 27 HOH HOH . 
I 4 HOH A 20 420 123 HOH HOH . 
I 4 HOH A 21 421 128 HOH HOH . 
I 4 HOH A 22 422 21 HOH HOH . 
I 4 HOH A 23 423 117 HOH HOH . 
I 4 HOH A 24 424 45 HOH HOH . 
I 4 HOH A 25 425 25 HOH HOH . 
I 4 HOH A 26 426 11 HOH HOH . 
I 4 HOH A 27 427 24 HOH HOH . 
I 4 HOH A 28 428 4 HOH HOH . 
I 4 HOH A 29 429 1 HOH HOH . 
I 4 HOH A 30 430 9 HOH HOH . 
I 4 HOH A 31 431 32 HOH HOH . 
I 4 HOH A 32 432 122 HOH HOH . 
I 4 HOH A 33 433 120 HOH HOH . 
J 4 HOH B 1 401 149 HOH HOH . 
J 4 HOH B 2 402 15 HOH HOH . 
J 4 HOH B 3 403 44 HOH HOH . 
J 4 HOH B 4 404 59 HOH HOH . 
J 4 HOH B 5 405 127 HOH HOH . 
J 4 HOH B 6 406 47 HOH HOH . 
J 4 HOH B 7 407 31 HOH HOH . 
J 4 HOH B 8 408 43 HOH HOH . 
J 4 HOH B 9 409 137 HOH HOH . 
J 4 HOH B 10 410 55 HOH HOH . 
J 4 HOH B 11 411 58 HOH HOH . 
J 4 HOH B 12 412 46 HOH HOH . 
J 4 HOH B 13 413 56 HOH HOH . 
J 4 HOH B 14 414 42 HOH HOH . 
J 4 HOH B 15 415 132 HOH HOH . 
J 4 HOH B 16 416 54 HOH HOH . 
J 4 HOH B 17 417 61 HOH HOH . 
J 4 HOH B 18 418 65 HOH HOH . 
J 4 HOH B 19 419 49 HOH HOH . 
J 4 HOH B 20 420 33 HOH HOH . 
J 4 HOH B 21 421 60 HOH HOH . 
J 4 HOH B 22 422 30 HOH HOH . 
J 4 HOH B 23 423 34 HOH HOH . 
J 4 HOH B 24 424 64 HOH HOH . 
J 4 HOH B 25 425 130 HOH HOH . 
J 4 HOH B 26 426 38 HOH HOH . 
J 4 HOH B 27 427 28 HOH HOH . 
J 4 HOH B 28 428 40 HOH HOH . 
J 4 HOH B 29 429 57 HOH HOH . 
J 4 HOH B 30 430 37 HOH HOH . 
J 4 HOH B 31 431 36 HOH HOH . 
J 4 HOH B 32 432 29 HOH HOH . 
J 4 HOH B 33 433 48 HOH HOH . 
J 4 HOH B 34 434 16 HOH HOH . 
J 4 HOH B 35 435 133 HOH HOH . 
J 4 HOH B 36 436 51 HOH HOH . 
J 4 HOH B 37 437 114 HOH HOH . 
J 4 HOH B 38 438 135 HOH HOH . 
J 4 HOH B 39 439 62 HOH HOH . 
J 4 HOH B 40 440 139 HOH HOH . 
J 4 HOH B 41 441 41 HOH HOH . 
J 4 HOH B 42 442 129 HOH HOH . 
J 4 HOH B 43 443 39 HOH HOH . 
J 4 HOH B 44 444 53 HOH HOH . 
J 4 HOH B 45 445 118 HOH HOH . 
J 4 HOH B 46 446 52 HOH HOH . 
J 4 HOH B 47 447 138 HOH HOH . 
J 4 HOH B 48 448 131 HOH HOH . 
J 4 HOH B 49 449 134 HOH HOH . 
K 4 HOH M 1 401 74 HOH HOH . 
K 4 HOH M 2 402 144 HOH HOH . 
K 4 HOH M 3 403 73 HOH HOH . 
K 4 HOH M 4 404 96 HOH HOH . 
K 4 HOH M 5 405 68 HOH HOH . 
K 4 HOH M 6 406 80 HOH HOH . 
K 4 HOH M 7 407 136 HOH HOH . 
K 4 HOH M 8 408 94 HOH HOH . 
K 4 HOH M 9 409 92 HOH HOH . 
K 4 HOH M 10 410 98 HOH HOH . 
K 4 HOH M 11 411 143 HOH HOH . 
K 4 HOH M 12 412 82 HOH HOH . 
K 4 HOH M 13 413 91 HOH HOH . 
K 4 HOH M 14 414 81 HOH HOH . 
K 4 HOH M 15 415 13 HOH HOH . 
K 4 HOH M 16 416 85 HOH HOH . 
K 4 HOH M 17 417 79 HOH HOH . 
K 4 HOH M 18 418 95 HOH HOH . 
K 4 HOH M 19 419 50 HOH HOH . 
K 4 HOH M 20 420 70 HOH HOH . 
K 4 HOH M 21 421 83 HOH HOH . 
K 4 HOH M 22 422 89 HOH HOH . 
K 4 HOH M 23 423 75 HOH HOH . 
K 4 HOH M 24 424 69 HOH HOH . 
K 4 HOH M 25 425 90 HOH HOH . 
K 4 HOH M 26 426 67 HOH HOH . 
K 4 HOH M 27 427 76 HOH HOH . 
K 4 HOH M 28 428 145 HOH HOH . 
K 4 HOH M 29 429 66 HOH HOH . 
K 4 HOH M 30 430 99 HOH HOH . 
K 4 HOH M 31 431 97 HOH HOH . 
K 4 HOH M 32 432 140 HOH HOH . 
K 4 HOH M 33 433 141 HOH HOH . 
K 4 HOH M 34 434 88 HOH HOH . 
K 4 HOH M 35 435 146 HOH HOH . 
K 4 HOH M 36 436 87 HOH HOH . 
K 4 HOH M 37 437 147 HOH HOH . 
K 4 HOH M 38 438 93 HOH HOH . 
K 4 HOH M 39 439 100 HOH HOH . 
K 4 HOH M 40 440 119 HOH HOH . 
K 4 HOH M 41 441 78 HOH HOH . 
K 4 HOH M 42 442 105 HOH HOH . 
K 4 HOH M 43 443 142 HOH HOH . 
L 4 HOH C 1 401 71 HOH HOH . 
L 4 HOH C 2 402 116 HOH HOH . 
L 4 HOH C 3 403 107 HOH HOH . 
L 4 HOH C 4 404 106 HOH HOH . 
L 4 HOH C 5 405 112 HOH HOH . 
L 4 HOH C 6 406 148 HOH HOH . 
L 4 HOH C 7 407 86 HOH HOH . 
L 4 HOH C 8 408 113 HOH HOH . 
L 4 HOH C 9 409 109 HOH HOH . 
L 4 HOH C 10 410 110 HOH HOH . 
L 4 HOH C 11 411 104 HOH HOH . 
L 4 HOH C 12 412 84 HOH HOH . 
L 4 HOH C 13 413 111 HOH HOH . 
L 4 HOH C 14 414 108 HOH HOH . 
L 4 HOH C 15 415 102 HOH HOH . 
L 4 HOH C 16 416 103 HOH HOH . 
L 4 HOH C 17 417 115 HOH HOH . 
L 4 HOH C 18 418 101 HOH HOH . 
L 4 HOH C 19 419 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAH . . . E 2 35.521 12.398 -35.618 1 70.83 ? N SAH 301 A 1 
HETATM 2 C CA SAH . . . E 2 35.434 12.839 -34.224 1 72.18 ? CA SAH 301 A 1 
HETATM 3 C CB SAH . . . E 2 36.736 13.492 -33.763 1 72.84 ? CB SAH 301 A 1 
HETATM 4 C CG SAH . . . E 2 38 12.639 -33.809 1 68.3 ? CG SAH 301 A 1 
HETATM 5 S SD SAH . . . E 2 39.201 13.257 -32.607 1 64.99 ? SD SAH 301 A 1 
HETATM 6 C C SAH . . . E 2 34.3 13.827 -33.953 1 67.34 ? C SAH 301 A 1 
HETATM 7 O O SAH . . . E 2 33.592 14.318 -34.835 1 68.11 ? O SAH 301 A 1 
HETATM 8 O OXT SAH . . . E 2 34.076 14.172 -32.804 1 64.83 ? OXT SAH 301 A 1 
HETATM 9 C C5' SAH . . . E 2 40.469 12.069 -33.123 1 68.09 ? C5' SAH 301 A 1 
HETATM 10 C C4' SAH . . . E 2 40.524 10.794 -32.286 1 67.13 ? C4' SAH 301 A 1 
HETATM 11 O O4' SAH . . . E 2 41.452 9.918 -32.891 1 70.6 ? O4' SAH 301 A 1 
HETATM 12 C C3' SAH . . . E 2 40.956 10.973 -30.827 1 69.56 ? C3' SAH 301 A 1 
HETATM 13 O O3' SAH . . . E 2 39.896 10.57 -29.975 1 64.69 ? O3' SAH 301 A 1 
HETATM 14 C C2' SAH . . . E 2 42.168 10.061 -30.652 1 74.47 ? C2' SAH 301 A 1 
HETATM 15 O O2' SAH . . . E 2 42.149 9.31 -29.443 1 66.77 ? O2' SAH 301 A 1 
HETATM 16 C C1' SAH . . . E 2 42.078 9.158 -31.882 1 75.23 ? C1' SAH 301 A 1 
HETATM 17 N N9 SAH . . . E 2 43.364 8.595 -32.317 1 76.72 ? N9 SAH 301 A 1 
HETATM 18 C C8 SAH . . . E 2 44.525 9.257 -32.599 1 78.59 ? C8 SAH 301 A 1 
HETATM 19 N N7 SAH . . . E 2 45.456 8.34 -32.96 1 85.22 ? N7 SAH 301 A 1 
HETATM 20 C C5 SAH . . . E 2 44.906 7.102 -32.906 1 85.62 ? C5 SAH 301 A 1 
HETATM 21 C C6 SAH . . . E 2 45.399 5.824 -33.161 1 86.07 ? C6 SAH 301 A 1 
HETATM 22 N N6 SAH . . . E 2 46.655 5.64 -33.547 1 85.05 ? N6 SAH 301 A 1 
HETATM 23 N N1 SAH . . . E 2 44.574 4.732 -33.012 1 88.08 ? N1 SAH 301 A 1 
HETATM 24 C C2 SAH . . . E 2 43.263 4.902 -32.616 1 87.22 ? C2 SAH 301 A 1 
HETATM 25 N N3 SAH . . . E 2 42.783 6.173 -32.362 1 83.38 ? N3 SAH 301 A 1 
HETATM 26 C C4 SAH . . . E 2 43.587 7.254 -32.506 1 82.13 ? C4 SAH 301 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           26 
#