data_6G87 # _model_server_result.job_id COpLWW2aAnFdAAw8mKadNg _model_server_result.datetime_utc '2024-11-25 23:50:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g87 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 6G87 # _exptl.entry_id 6G87 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G87 _cell.length_a 119.592 _cell.length_b 119.592 _cell.length_c 78.476 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G87 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G 1 1 C,D,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 22 A LYS 22 1_555 A N MSE 23 A MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale2 A C MSE 23 A MSE 23 1_555 A N ASP 24 A ASP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C SER 43 A SER 43 1_555 A N MSE 44 A MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 44 A MSE 44 1_555 A N ASP 45 A ASP 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale5 A C PRO 164 A PRO 164 1_555 A N MSE 165 A MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 A C MSE 165 A MSE 165 1_555 A N GLU 166 A GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C LYS 22 B LYS 22 1_555 B N MSE 23 B MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale8 B C MSE 23 B MSE 23 1_555 B N ASP 24 B ASP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 B C SER 43 B SER 43 1_555 B N MSE 44 B MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 B C MSE 44 B MSE 44 1_555 B N ASP 45 B ASP 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 B C PRO 164 B PRO 164 1_555 B N MSE 165 B MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale12 B C MSE 165 B MSE 165 1_555 B N GLU 166 B GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale13 C C LYS 22 C LYS 22 1_555 C N MSE 23 C MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale14 C C MSE 23 C MSE 23 1_555 C N ASP 24 C ASP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale15 C C SER 43 C SER 43 1_555 C N MSE 44 C MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 C C MSE 44 C MSE 44 1_555 C N ASP 45 C ASP 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale17 C C PRO 164 C PRO 164 1_555 C N MSE 165 C MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale18 C C MSE 165 C MSE 165 1_555 C N GLU 166 C GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale19 D C LYS 22 D LYS 22 1_555 D N MSE 23 D MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 D C MSE 23 D MSE 23 1_555 D N ASP 24 D ASP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale21 D C SER 43 D SER 43 1_555 D N MSE 44 D MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale22 D C MSE 44 D MSE 44 1_555 D N ASP 45 D ASP 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale23 D C PRO 164 D PRO 164 1_555 D N MSE 165 D MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale24 D C MSE 165 D MSE 165 1_555 D N GLU 166 D GLU 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 235 n n C3' C4' NHE sing 236 n n C3' "H3'1" NHE sing 237 n n C3' "H3'2" NHE sing 238 n n C2' C1' NHE sing 239 n n C2' "H2'1" NHE sing 240 n n C2' "H2'2" NHE sing 241 n n C1' C6' NHE sing 242 n n C1' N NHE sing 243 n n C1' "HC'1" NHE sing 244 n n C6' C5' NHE sing 245 n n C6' "H6'1" NHE sing 246 n n C6' "H6'2" NHE sing 247 n n N C1 NHE sing 248 n n N HN NHE sing 249 n n C1 C2 NHE sing 250 n n C1 HC11 NHE sing 251 n n C1 HC12 NHE sing 252 n n C2 S NHE sing 253 n n C2 HC21 NHE sing 254 n n C2 HC22 NHE sing 255 n n S O1 NHE doub 256 n n S O2 NHE doub 257 n n S O3 NHE sing 258 n n O3 HO3 NHE sing 259 n n C5' C4' NHE sing 260 n n C5' "H5'1" NHE sing 261 n n C5' "H5'2" NHE sing 262 n n C4' "H4'1" NHE sing 263 n n C4' "H4'2" NHE sing 264 n n # _atom_sites.entry_id 6G87 _atom_sites.fract_transf_matrix[1][1] 0.008362 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NHE A 1 301 1003 NHE NHE . F 2 NHE A 1 302 1001 NHE NHE . G 2 NHE B 1 301 1002 NHE NHE . H 2 NHE D 1 301 1002 NHE NHE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . H 2 2.49 43.798 32.749 1 91.22 ? C3' NHE 301 D 1 HETATM 2 C C2' NHE . . . H 2 3.268 42.486 32.735 1 91 ? C2' NHE 301 D 1 HETATM 3 C C1' NHE . . . H 2 3.277 41.827 34.125 1 96.89 ? C1' NHE 301 D 1 HETATM 4 C C6' NHE . . . H 2 1.839 41.532 34.586 1 101.72 ? C6' NHE 301 D 1 HETATM 5 N N NHE . . . H 2 4.089 40.619 34.141 1 91.07 ? N NHE 301 D 1 HETATM 6 C C1 NHE . . . H 2 4.634 40.09 35.378 1 95.23 ? C1 NHE 301 D 1 HETATM 7 C C2 NHE . . . H 2 3.965 38.761 35.772 1 95.01 ? C2 NHE 301 D 1 HETATM 8 S S NHE . . . H 2 4.863 37.796 36.827 1 90.81 ? S NHE 301 D 1 HETATM 9 O O1 NHE . . . H 2 3.764 36.867 37.601 1 87.85 ? O1 NHE 301 D 1 HETATM 10 O O2 NHE . . . H 2 5.826 37.006 36.112 1 81.62 ? O2 NHE 301 D 1 HETATM 11 O O3 NHE . . . H 2 5.591 38.576 37.785 1 89.01 ? O3 NHE 301 D 1 HETATM 12 C C5' NHE . . . H 2 0.975 42.803 34.613 1 101.83 ? C5' NHE 301 D 1 HETATM 13 C C4' NHE . . . H 2 1.072 43.639 33.318 1 97.79 ? C4' NHE 301 D 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #