data_6G8A # _model_server_result.job_id 9VU4ssC4dhwniBYG5omutA _model_server_result.datetime_utc '2024-12-01 19:19:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g8a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":218}' # _entry.id 6G8A # _exptl.entry_id 6G8A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G8A _cell.length_a 78.903 _cell.length_b 78.903 _cell.length_c 36.941 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G8A _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id S _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 C CYS 6 1_555 A SG CYS 127 C CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 30 C CYS 30 1_555 A SG CYS 115 C CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf3 A SG CYS 64 C CYS 64 1_555 A SG CYS 80 C CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf4 A SG CYS 76 C CYS 76 1_555 A SG CYS 94 C CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 A O SER 60 C SER 60 1_555 S NA NA . C NA 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc2 A O CYS 64 C CYS 64 1_555 S NA NA . C NA 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc3 A OG SER 72 C SER 72 1_555 S NA NA . C NA 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc4 A O ARG 73 C ARG 73 1_555 S NA NA . C NA 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc5 S NA NA . C NA 218 1_555 W O HOH . C HOH 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc6 S NA NA . C NA 218 1_555 W O HOH . C HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6G8A _atom_sites.fract_transf_matrix[1][1] 0.012674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02707 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL C 1 201 1 CL CL . C 2 CL C 1 202 2 CL CL . D 2 CL C 1 203 3 CL CL . E 2 CL C 1 204 4 CL CL . F 2 CL C 1 205 5 CL CL . G 2 CL C 1 206 6 CL CL . H 2 CL C 1 207 7 CL CL . I 2 CL C 1 208 8 CL CL . J 2 CL C 1 209 9 CL CL . K 2 CL C 1 210 10 CL CL . L 2 CL C 1 211 11 CL CL . M 2 CL C 1 212 12 CL CL . N 2 CL C 1 213 13 CL CL . O 2 CL C 1 214 14 CL CL . P 2 CL C 1 215 15 CL CL . Q 2 CL C 1 216 16 CL CL . R 2 CL C 1 217 17 CL CL . S 3 NA C 1 218 1 NA NA . T 4 EDO C 1 219 1 EDO EDO . U 4 EDO C 1 220 2 EDO EDO . V 4 EDO C 1 221 3 EDO EDO . W 5 HOH C 1 301 31 HOH HOH . W 5 HOH C 2 302 161 HOH HOH . W 5 HOH C 3 303 154 HOH HOH . W 5 HOH C 4 304 110 HOH HOH . W 5 HOH C 5 305 144 HOH HOH . W 5 HOH C 6 306 147 HOH HOH . W 5 HOH C 7 307 15 HOH HOH . W 5 HOH C 8 308 106 HOH HOH . W 5 HOH C 9 309 79 HOH HOH . W 5 HOH C 10 310 172 HOH HOH . W 5 HOH C 11 311 51 HOH HOH . W 5 HOH C 12 312 83 HOH HOH . W 5 HOH C 13 313 24 HOH HOH . W 5 HOH C 14 314 18 HOH HOH . W 5 HOH C 15 315 45 HOH HOH . W 5 HOH C 16 316 27 HOH HOH . W 5 HOH C 17 317 103 HOH HOH . W 5 HOH C 18 318 89 HOH HOH . W 5 HOH C 19 319 153 HOH HOH . W 5 HOH C 20 320 126 HOH HOH . W 5 HOH C 21 321 68 HOH HOH . W 5 HOH C 22 322 168 HOH HOH . W 5 HOH C 23 323 48 HOH HOH . W 5 HOH C 24 324 5 HOH HOH . W 5 HOH C 25 325 162 HOH HOH . W 5 HOH C 26 326 52 HOH HOH . W 5 HOH C 27 327 72 HOH HOH . W 5 HOH C 28 328 23 HOH HOH . W 5 HOH C 29 329 85 HOH HOH . W 5 HOH C 30 330 17 HOH HOH . W 5 HOH C 31 331 75 HOH HOH . W 5 HOH C 32 332 61 HOH HOH . W 5 HOH C 33 333 4 HOH HOH . W 5 HOH C 34 334 26 HOH HOH . W 5 HOH C 35 335 32 HOH HOH . W 5 HOH C 36 336 65 HOH HOH . W 5 HOH C 37 337 49 HOH HOH . W 5 HOH C 38 338 96 HOH HOH . W 5 HOH C 39 339 91 HOH HOH . W 5 HOH C 40 340 40 HOH HOH . W 5 HOH C 41 341 29 HOH HOH . W 5 HOH C 42 342 57 HOH HOH . W 5 HOH C 43 343 1 HOH HOH . W 5 HOH C 44 344 10 HOH HOH . W 5 HOH C 45 345 13 HOH HOH . W 5 HOH C 46 346 3 HOH HOH . W 5 HOH C 47 347 58 HOH HOH . W 5 HOH C 48 348 150 HOH HOH . W 5 HOH C 49 349 54 HOH HOH . W 5 HOH C 50 350 84 HOH HOH . W 5 HOH C 51 351 41 HOH HOH . W 5 HOH C 52 352 42 HOH HOH . W 5 HOH C 53 353 63 HOH HOH . W 5 HOH C 54 354 108 HOH HOH . W 5 HOH C 55 355 71 HOH HOH . W 5 HOH C 56 356 76 HOH HOH . W 5 HOH C 57 357 70 HOH HOH . W 5 HOH C 58 358 16 HOH HOH . W 5 HOH C 59 359 146 HOH HOH . W 5 HOH C 60 360 55 HOH HOH . W 5 HOH C 61 361 130 HOH HOH . W 5 HOH C 62 362 20 HOH HOH . W 5 HOH C 63 363 36 HOH HOH . W 5 HOH C 64 364 6 HOH HOH . W 5 HOH C 65 365 8 HOH HOH . W 5 HOH C 66 366 107 HOH HOH . W 5 HOH C 67 367 101 HOH HOH . W 5 HOH C 68 368 14 HOH HOH . W 5 HOH C 69 369 134 HOH HOH . W 5 HOH C 70 370 25 HOH HOH . W 5 HOH C 71 371 62 HOH HOH . W 5 HOH C 72 372 69 HOH HOH . W 5 HOH C 73 373 104 HOH HOH . W 5 HOH C 74 374 74 HOH HOH . W 5 HOH C 75 375 43 HOH HOH . W 5 HOH C 76 376 47 HOH HOH . W 5 HOH C 77 377 60 HOH HOH . W 5 HOH C 78 378 37 HOH HOH . W 5 HOH C 79 379 2 HOH HOH . W 5 HOH C 80 380 73 HOH HOH . W 5 HOH C 81 381 50 HOH HOH . W 5 HOH C 82 382 164 HOH HOH . W 5 HOH C 83 383 35 HOH HOH . W 5 HOH C 84 384 30 HOH HOH . W 5 HOH C 85 385 12 HOH HOH . W 5 HOH C 86 386 81 HOH HOH . W 5 HOH C 87 387 7 HOH HOH . W 5 HOH C 88 388 95 HOH HOH . W 5 HOH C 89 389 11 HOH HOH . W 5 HOH C 90 390 113 HOH HOH . W 5 HOH C 91 391 105 HOH HOH . W 5 HOH C 92 392 132 HOH HOH . W 5 HOH C 93 393 39 HOH HOH . W 5 HOH C 94 394 128 HOH HOH . W 5 HOH C 95 395 170 HOH HOH . W 5 HOH C 96 396 121 HOH HOH . W 5 HOH C 97 397 19 HOH HOH . W 5 HOH C 98 398 64 HOH HOH . W 5 HOH C 99 399 82 HOH HOH . W 5 HOH C 100 400 28 HOH HOH . W 5 HOH C 101 401 9 HOH HOH . W 5 HOH C 102 402 92 HOH HOH . W 5 HOH C 103 403 145 HOH HOH . W 5 HOH C 104 404 38 HOH HOH . W 5 HOH C 105 405 120 HOH HOH . W 5 HOH C 106 406 77 HOH HOH . W 5 HOH C 107 407 135 HOH HOH . W 5 HOH C 108 408 111 HOH HOH . W 5 HOH C 109 409 112 HOH HOH . W 5 HOH C 110 410 44 HOH HOH . W 5 HOH C 111 411 124 HOH HOH . W 5 HOH C 112 412 66 HOH HOH . W 5 HOH C 113 413 122 HOH HOH . W 5 HOH C 114 414 56 HOH HOH . W 5 HOH C 115 415 21 HOH HOH . W 5 HOH C 116 416 22 HOH HOH . W 5 HOH C 117 417 34 HOH HOH . W 5 HOH C 118 418 100 HOH HOH . W 5 HOH C 119 419 116 HOH HOH . W 5 HOH C 120 420 177 HOH HOH . W 5 HOH C 121 421 149 HOH HOH . W 5 HOH C 122 422 78 HOH HOH . W 5 HOH C 123 423 171 HOH HOH . W 5 HOH C 124 424 118 HOH HOH . W 5 HOH C 125 425 94 HOH HOH . W 5 HOH C 126 426 174 HOH HOH . W 5 HOH C 127 427 127 HOH HOH . W 5 HOH C 128 428 167 HOH HOH . W 5 HOH C 129 429 155 HOH HOH . W 5 HOH C 130 430 33 HOH HOH . W 5 HOH C 131 431 97 HOH HOH . W 5 HOH C 132 432 159 HOH HOH . W 5 HOH C 133 433 109 HOH HOH . W 5 HOH C 134 434 123 HOH HOH . W 5 HOH C 135 435 102 HOH HOH . W 5 HOH C 136 436 46 HOH HOH . W 5 HOH C 137 437 117 HOH HOH . W 5 HOH C 138 438 148 HOH HOH . W 5 HOH C 139 439 142 HOH HOH . W 5 HOH C 140 440 165 HOH HOH . W 5 HOH C 141 441 90 HOH HOH . W 5 HOH C 142 442 131 HOH HOH . W 5 HOH C 143 443 152 HOH HOH . W 5 HOH C 144 444 143 HOH HOH . W 5 HOH C 145 445 86 HOH HOH . W 5 HOH C 146 446 151 HOH HOH . W 5 HOH C 147 447 157 HOH HOH . W 5 HOH C 148 448 53 HOH HOH . W 5 HOH C 149 449 114 HOH HOH . W 5 HOH C 150 450 156 HOH HOH . W 5 HOH C 151 451 137 HOH HOH . W 5 HOH C 152 452 175 HOH HOH . W 5 HOH C 153 453 160 HOH HOH . W 5 HOH C 154 454 173 HOH HOH . W 5 HOH C 155 455 115 HOH HOH . W 5 HOH C 156 456 87 HOH HOH . W 5 HOH C 157 457 141 HOH HOH . W 5 HOH C 158 458 163 HOH HOH . W 5 HOH C 159 459 158 HOH HOH . W 5 HOH C 160 460 176 HOH HOH . W 5 HOH C 161 461 136 HOH HOH . W 5 HOH C 162 462 133 HOH HOH . W 5 HOH C 163 463 166 HOH HOH . W 5 HOH C 164 464 98 HOH HOH . W 5 HOH C 165 465 129 HOH HOH . W 5 HOH C 166 466 88 HOH HOH . W 5 HOH C 167 467 140 HOH HOH . W 5 HOH C 168 468 99 HOH HOH . W 5 HOH C 169 469 80 HOH HOH . W 5 HOH C 170 470 67 HOH HOH . W 5 HOH C 171 471 93 HOH HOH . W 5 HOH C 172 472 138 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id S _atom_site.label_entity_id 3 _atom_site.Cartn_x 47.355 _atom_site.Cartn_y 25.279 _atom_site.Cartn_z -3.514 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 218 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #