data_6G8F # _model_server_result.job_id TbMbKJD5x6N3Hy3yblH2iQ _model_server_result.datetime_utc '2024-11-15 18:50:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6g8f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 6G8F # _exptl.entry_id 6G8F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6G8F _cell.length_a 80.781 _cell.length_b 82.338 _cell.length_c 92.397 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G8F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 276 A HIS 1146 1_555 B MN MN . A MN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc2 A OE1 GLU 278 A GLU 1148 1_555 B MN MN . A MN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc3 A SG CYS 461 A CYS 1331 1_555 C ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc4 A SG CYS 464 A CYS 1334 1_555 C ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc5 A SG CYS 488 A CYS 1358 1_555 C ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc6 A SG CYS 491 A CYS 1361 1_555 C ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc7 B MN MN . A MN 1501 1_555 D N3 K0I . A K0I 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc8 B MN MN . A MN 1501 1_555 D N4 K0I . A K0I 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc9 B MN MN . A MN 1501 1_555 J O HOH . A HOH 1623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc10 B MN MN . A MN 1501 1_555 J O HOH . A HOH 1690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6G8F _atom_sites.fract_transf_matrix[1][1] 0.012379 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012145 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010823 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 1501 1506 MN MN . C 3 ZN A 1 1502 1508 ZN ZN . D 4 K0I A 1 1503 2639 K0I K0I . E 5 DMS A 1 1504 2 DMS DMS . F 5 DMS A 1 1505 3 DMS DMS . G 5 DMS A 1 1506 4 DMS DMS . H 5 DMS A 1 1507 5 DMS DMS . I 6 CL A 1 1508 1 CL CL . J 7 HOH A 1 1601 61 HOH HOH . J 7 HOH A 2 1602 224 HOH HOH . J 7 HOH A 3 1603 101 HOH HOH . J 7 HOH A 4 1604 141 HOH HOH . J 7 HOH A 5 1605 48 HOH HOH . J 7 HOH A 6 1606 242 HOH HOH . J 7 HOH A 7 1607 180 HOH HOH . J 7 HOH A 8 1608 187 HOH HOH . J 7 HOH A 9 1609 11 HOH HOH . J 7 HOH A 10 1610 159 HOH HOH . J 7 HOH A 11 1611 95 HOH HOH . J 7 HOH A 12 1612 85 HOH HOH . J 7 HOH A 13 1613 172 HOH HOH . J 7 HOH A 14 1614 118 HOH HOH . J 7 HOH A 15 1615 35 HOH HOH . J 7 HOH A 16 1616 56 HOH HOH . J 7 HOH A 17 1617 60 HOH HOH . J 7 HOH A 18 1618 74 HOH HOH . J 7 HOH A 19 1619 29 HOH HOH . J 7 HOH A 20 1620 104 HOH HOH . J 7 HOH A 21 1621 57 HOH HOH . J 7 HOH A 22 1622 165 HOH HOH . J 7 HOH A 23 1623 2 HOH HOH . J 7 HOH A 24 1624 75 HOH HOH . J 7 HOH A 25 1625 203 HOH HOH . J 7 HOH A 26 1626 179 HOH HOH . J 7 HOH A 27 1627 68 HOH HOH . J 7 HOH A 28 1628 287 HOH HOH . J 7 HOH A 29 1629 86 HOH HOH . J 7 HOH A 30 1630 160 HOH HOH . J 7 HOH A 31 1631 253 HOH HOH . J 7 HOH A 32 1632 232 HOH HOH . J 7 HOH A 33 1633 12 HOH HOH . J 7 HOH A 34 1634 28 HOH HOH . J 7 HOH A 35 1635 40 HOH HOH . J 7 HOH A 36 1636 22 HOH HOH . J 7 HOH A 37 1637 63 HOH HOH . J 7 HOH A 38 1638 205 HOH HOH . J 7 HOH A 39 1639 127 HOH HOH . J 7 HOH A 40 1640 227 HOH HOH . J 7 HOH A 41 1641 124 HOH HOH . J 7 HOH A 42 1642 105 HOH HOH . J 7 HOH A 43 1643 34 HOH HOH . J 7 HOH A 44 1644 53 HOH HOH . J 7 HOH A 45 1645 115 HOH HOH . J 7 HOH A 46 1646 91 HOH HOH . J 7 HOH A 47 1647 99 HOH HOH . J 7 HOH A 48 1648 153 HOH HOH . J 7 HOH A 49 1649 66 HOH HOH . J 7 HOH A 50 1650 183 HOH HOH . J 7 HOH A 51 1651 46 HOH HOH . J 7 HOH A 52 1652 114 HOH HOH . J 7 HOH A 53 1653 230 HOH HOH . J 7 HOH A 54 1654 135 HOH HOH . J 7 HOH A 55 1655 72 HOH HOH . J 7 HOH A 56 1656 84 HOH HOH . J 7 HOH A 57 1657 146 HOH HOH . J 7 HOH A 58 1658 18 HOH HOH . J 7 HOH A 59 1659 154 HOH HOH . J 7 HOH A 60 1660 4 HOH HOH . J 7 HOH A 61 1661 130 HOH HOH . J 7 HOH A 62 1662 128 HOH HOH . J 7 HOH A 63 1663 231 HOH HOH . J 7 HOH A 64 1664 64 HOH HOH . J 7 HOH A 65 1665 157 HOH HOH . J 7 HOH A 66 1666 73 HOH HOH . J 7 HOH A 67 1667 174 HOH HOH . J 7 HOH A 68 1668 186 HOH HOH . J 7 HOH A 69 1669 122 HOH HOH . J 7 HOH A 70 1670 31 HOH HOH . J 7 HOH A 71 1671 1 HOH HOH . J 7 HOH A 72 1672 177 HOH HOH . J 7 HOH A 73 1673 136 HOH HOH . J 7 HOH A 74 1674 67 HOH HOH . J 7 HOH A 75 1675 14 HOH HOH . J 7 HOH A 76 1676 268 HOH HOH . J 7 HOH A 77 1677 277 HOH HOH . J 7 HOH A 78 1678 32 HOH HOH . J 7 HOH A 79 1679 112 HOH HOH . J 7 HOH A 80 1680 286 HOH HOH . J 7 HOH A 81 1681 164 HOH HOH . J 7 HOH A 82 1682 33 HOH HOH . J 7 HOH A 83 1683 55 HOH HOH . J 7 HOH A 84 1684 83 HOH HOH . J 7 HOH A 85 1685 166 HOH HOH . J 7 HOH A 86 1686 38 HOH HOH . J 7 HOH A 87 1687 26 HOH HOH . J 7 HOH A 88 1688 276 HOH HOH . J 7 HOH A 89 1689 235 HOH HOH . J 7 HOH A 90 1690 145 HOH HOH . J 7 HOH A 91 1691 228 HOH HOH . J 7 HOH A 92 1692 294 HOH HOH . J 7 HOH A 93 1693 58 HOH HOH . J 7 HOH A 94 1694 70 HOH HOH . J 7 HOH A 95 1695 152 HOH HOH . J 7 HOH A 96 1696 20 HOH HOH . J 7 HOH A 97 1697 214 HOH HOH . J 7 HOH A 98 1698 92 HOH HOH . J 7 HOH A 99 1699 168 HOH HOH . J 7 HOH A 100 1700 45 HOH HOH . J 7 HOH A 101 1701 131 HOH HOH . J 7 HOH A 102 1702 39 HOH HOH . J 7 HOH A 103 1703 52 HOH HOH . J 7 HOH A 104 1704 234 HOH HOH . J 7 HOH A 105 1705 107 HOH HOH . J 7 HOH A 106 1706 237 HOH HOH . J 7 HOH A 107 1707 76 HOH HOH . J 7 HOH A 108 1708 54 HOH HOH . J 7 HOH A 109 1709 289 HOH HOH . J 7 HOH A 110 1710 248 HOH HOH . J 7 HOH A 111 1711 71 HOH HOH . J 7 HOH A 112 1712 269 HOH HOH . J 7 HOH A 113 1713 89 HOH HOH . J 7 HOH A 114 1714 161 HOH HOH . J 7 HOH A 115 1715 69 HOH HOH . J 7 HOH A 116 1716 15 HOH HOH . J 7 HOH A 117 1717 108 HOH HOH . J 7 HOH A 118 1718 110 HOH HOH . J 7 HOH A 119 1719 236 HOH HOH . J 7 HOH A 120 1720 198 HOH HOH . J 7 HOH A 121 1721 193 HOH HOH . J 7 HOH A 122 1722 9 HOH HOH . J 7 HOH A 123 1723 264 HOH HOH . J 7 HOH A 124 1724 255 HOH HOH . J 7 HOH A 125 1725 41 HOH HOH . J 7 HOH A 126 1726 19 HOH HOH . J 7 HOH A 127 1727 142 HOH HOH . J 7 HOH A 128 1728 138 HOH HOH . J 7 HOH A 129 1729 47 HOH HOH . J 7 HOH A 130 1730 116 HOH HOH . J 7 HOH A 131 1731 148 HOH HOH . J 7 HOH A 132 1732 42 HOH HOH . J 7 HOH A 133 1733 169 HOH HOH . J 7 HOH A 134 1734 275 HOH HOH . J 7 HOH A 135 1735 239 HOH HOH . J 7 HOH A 136 1736 102 HOH HOH . J 7 HOH A 137 1737 233 HOH HOH . J 7 HOH A 138 1738 16 HOH HOH . J 7 HOH A 139 1739 271 HOH HOH . J 7 HOH A 140 1740 278 HOH HOH . J 7 HOH A 141 1741 262 HOH HOH . J 7 HOH A 142 1742 195 HOH HOH . J 7 HOH A 143 1743 5 HOH HOH . J 7 HOH A 144 1744 244 HOH HOH . J 7 HOH A 145 1745 6 HOH HOH . J 7 HOH A 146 1746 279 HOH HOH . J 7 HOH A 147 1747 204 HOH HOH . J 7 HOH A 148 1748 190 HOH HOH . J 7 HOH A 149 1749 178 HOH HOH . J 7 HOH A 150 1750 129 HOH HOH . J 7 HOH A 151 1751 261 HOH HOH . J 7 HOH A 152 1752 97 HOH HOH . J 7 HOH A 153 1753 251 HOH HOH . J 7 HOH A 154 1754 156 HOH HOH . J 7 HOH A 155 1755 44 HOH HOH . J 7 HOH A 156 1756 213 HOH HOH . J 7 HOH A 157 1757 10 HOH HOH . J 7 HOH A 158 1758 140 HOH HOH . J 7 HOH A 159 1759 238 HOH HOH . J 7 HOH A 160 1760 23 HOH HOH . J 7 HOH A 161 1761 282 HOH HOH . J 7 HOH A 162 1762 229 HOH HOH . J 7 HOH A 163 1763 93 HOH HOH . J 7 HOH A 164 1764 260 HOH HOH . J 7 HOH A 165 1765 281 HOH HOH . J 7 HOH A 166 1766 126 HOH HOH . J 7 HOH A 167 1767 185 HOH HOH . J 7 HOH A 168 1768 134 HOH HOH . J 7 HOH A 169 1769 80 HOH HOH . J 7 HOH A 170 1770 106 HOH HOH . J 7 HOH A 171 1771 247 HOH HOH . J 7 HOH A 172 1772 98 HOH HOH . J 7 HOH A 173 1773 200 HOH HOH . J 7 HOH A 174 1774 17 HOH HOH . J 7 HOH A 175 1775 284 HOH HOH . J 7 HOH A 176 1776 125 HOH HOH . J 7 HOH A 177 1777 207 HOH HOH . J 7 HOH A 178 1778 43 HOH HOH . J 7 HOH A 179 1779 295 HOH HOH . J 7 HOH A 180 1780 252 HOH HOH . J 7 HOH A 181 1781 189 HOH HOH . J 7 HOH A 182 1782 7 HOH HOH . J 7 HOH A 183 1783 144 HOH HOH . J 7 HOH A 184 1784 243 HOH HOH . J 7 HOH A 185 1785 149 HOH HOH . J 7 HOH A 186 1786 184 HOH HOH . J 7 HOH A 187 1787 37 HOH HOH . J 7 HOH A 188 1788 123 HOH HOH . J 7 HOH A 189 1789 173 HOH HOH . J 7 HOH A 190 1790 192 HOH HOH . J 7 HOH A 191 1791 170 HOH HOH . J 7 HOH A 192 1792 79 HOH HOH . J 7 HOH A 193 1793 21 HOH HOH . J 7 HOH A 194 1794 119 HOH HOH . J 7 HOH A 195 1795 257 HOH HOH . J 7 HOH A 196 1796 240 HOH HOH . J 7 HOH A 197 1797 100 HOH HOH . J 7 HOH A 198 1798 65 HOH HOH . J 7 HOH A 199 1799 208 HOH HOH . J 7 HOH A 200 1800 78 HOH HOH . J 7 HOH A 201 1801 220 HOH HOH . J 7 HOH A 202 1802 216 HOH HOH . J 7 HOH A 203 1803 226 HOH HOH . J 7 HOH A 204 1804 30 HOH HOH . J 7 HOH A 205 1805 293 HOH HOH . J 7 HOH A 206 1806 246 HOH HOH . J 7 HOH A 207 1807 199 HOH HOH . J 7 HOH A 208 1808 266 HOH HOH . J 7 HOH A 209 1809 254 HOH HOH . J 7 HOH A 210 1810 151 HOH HOH . J 7 HOH A 211 1811 211 HOH HOH . J 7 HOH A 212 1812 77 HOH HOH . J 7 HOH A 213 1813 167 HOH HOH . J 7 HOH A 214 1814 210 HOH HOH . J 7 HOH A 215 1815 241 HOH HOH . J 7 HOH A 216 1816 150 HOH HOH . J 7 HOH A 217 1817 201 HOH HOH . J 7 HOH A 218 1818 221 HOH HOH . J 7 HOH A 219 1819 272 HOH HOH . J 7 HOH A 220 1820 265 HOH HOH . J 7 HOH A 221 1821 202 HOH HOH . J 7 HOH A 222 1822 259 HOH HOH . J 7 HOH A 223 1823 197 HOH HOH . J 7 HOH A 224 1824 249 HOH HOH . J 7 HOH A 225 1825 288 HOH HOH . J 7 HOH A 226 1826 162 HOH HOH . J 7 HOH A 227 1827 285 HOH HOH . J 7 HOH A 228 1828 206 HOH HOH . J 7 HOH A 229 1829 215 HOH HOH . J 7 HOH A 230 1830 274 HOH HOH . J 7 HOH A 231 1831 96 HOH HOH . J 7 HOH A 232 1832 163 HOH HOH . J 7 HOH A 233 1833 245 HOH HOH . J 7 HOH A 234 1834 209 HOH HOH . J 7 HOH A 235 1835 87 HOH HOH . J 7 HOH A 236 1836 111 HOH HOH . J 7 HOH A 237 1837 143 HOH HOH . J 7 HOH A 238 1838 250 HOH HOH . J 7 HOH A 239 1839 223 HOH HOH . J 7 HOH A 240 1840 181 HOH HOH . J 7 HOH A 241 1841 273 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 24.972 _atom_site.Cartn_y 2.271 _atom_site.Cartn_z 11.818 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 1501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #