data_6GBT
#
_model_server_result.job_id            eOhdnc0RWrRW2c5bCM7wzg 
_model_server_result.datetime_utc      '2024-11-04 20:19:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6gbt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    6GBT 
#
_exptl.entry_id    6GBT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6GBT 
_cell.length_a            91.654 
_cell.length_b            91.654 
_cell.length_c            134.099 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6GBT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 91.654 0 
3 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 6_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 91.654 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 50 A GLU 50 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
metalc ? metalc2 A O LEU 53 A LEU 53 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc3 A O ALA 56 A ALA 56 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? 
metalc ? metalc4 E NA NA . A NA 304 1_555 F O HOH . A HOH 466 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc5 E NA NA . A NA 304 1_555 F O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6GBT 
_atom_sites.fract_transf_matrix[1][1]    0.010911 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010911 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007457 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAD A 1 301 2 NAD NAD . 
C 3 F45 A 1 302 1 F45 F45 . 
D 4 DMS A 1 303 2 DMS DMS . 
E 5 NA A 1 304 1 NA NA . 
F 6 HOH A 1 401 99 HOH HOH . 
F 6 HOH A 2 402 51 HOH HOH . 
F 6 HOH A 3 403 92 HOH HOH . 
F 6 HOH A 4 404 53 HOH HOH . 
F 6 HOH A 5 405 203 HOH HOH . 
F 6 HOH A 6 406 28 HOH HOH . 
F 6 HOH A 7 407 71 HOH HOH . 
F 6 HOH A 8 408 125 HOH HOH . 
F 6 HOH A 9 409 68 HOH HOH . 
F 6 HOH A 10 410 94 HOH HOH . 
F 6 HOH A 11 411 209 HOH HOH . 
F 6 HOH A 12 412 119 HOH HOH . 
F 6 HOH A 13 413 73 HOH HOH . 
F 6 HOH A 14 414 20 HOH HOH . 
F 6 HOH A 15 415 26 HOH HOH . 
F 6 HOH A 16 416 4 HOH HOH . 
F 6 HOH A 17 417 35 HOH HOH . 
F 6 HOH A 18 418 70 HOH HOH . 
F 6 HOH A 19 419 18 HOH HOH . 
F 6 HOH A 20 420 69 HOH HOH . 
F 6 HOH A 21 421 59 HOH HOH . 
F 6 HOH A 22 422 13 HOH HOH . 
F 6 HOH A 23 423 83 HOH HOH . 
F 6 HOH A 24 424 80 HOH HOH . 
F 6 HOH A 25 425 3 HOH HOH . 
F 6 HOH A 26 426 46 HOH HOH . 
F 6 HOH A 27 427 239 HOH HOH . 
F 6 HOH A 28 428 10 HOH HOH . 
F 6 HOH A 29 429 170 HOH HOH . 
F 6 HOH A 30 430 114 HOH HOH . 
F 6 HOH A 31 431 29 HOH HOH . 
F 6 HOH A 32 432 122 HOH HOH . 
F 6 HOH A 33 433 238 HOH HOH . 
F 6 HOH A 34 434 252 HOH HOH . 
F 6 HOH A 35 435 15 HOH HOH . 
F 6 HOH A 36 436 1 HOH HOH . 
F 6 HOH A 37 437 21 HOH HOH . 
F 6 HOH A 38 438 66 HOH HOH . 
F 6 HOH A 39 439 72 HOH HOH . 
F 6 HOH A 40 440 52 HOH HOH . 
F 6 HOH A 41 441 11 HOH HOH . 
F 6 HOH A 42 442 2 HOH HOH . 
F 6 HOH A 43 443 8 HOH HOH . 
F 6 HOH A 44 444 64 HOH HOH . 
F 6 HOH A 45 445 174 HOH HOH . 
F 6 HOH A 46 446 86 HOH HOH . 
F 6 HOH A 47 447 97 HOH HOH . 
F 6 HOH A 48 448 90 HOH HOH . 
F 6 HOH A 49 449 91 HOH HOH . 
F 6 HOH A 50 450 23 HOH HOH . 
F 6 HOH A 51 451 25 HOH HOH . 
F 6 HOH A 52 452 55 HOH HOH . 
F 6 HOH A 53 453 49 HOH HOH . 
F 6 HOH A 54 454 31 HOH HOH . 
F 6 HOH A 55 455 165 HOH HOH . 
F 6 HOH A 56 456 19 HOH HOH . 
F 6 HOH A 57 457 39 HOH HOH . 
F 6 HOH A 58 458 243 HOH HOH . 
F 6 HOH A 59 459 36 HOH HOH . 
F 6 HOH A 60 460 104 HOH HOH . 
F 6 HOH A 61 461 82 HOH HOH . 
F 6 HOH A 62 462 61 HOH HOH . 
F 6 HOH A 63 463 7 HOH HOH . 
F 6 HOH A 64 464 63 HOH HOH . 
F 6 HOH A 65 465 93 HOH HOH . 
F 6 HOH A 66 466 160 HOH HOH . 
F 6 HOH A 67 467 76 HOH HOH . 
F 6 HOH A 68 468 201 HOH HOH . 
F 6 HOH A 69 469 84 HOH HOH . 
F 6 HOH A 70 470 9 HOH HOH . 
F 6 HOH A 71 471 14 HOH HOH . 
F 6 HOH A 72 472 22 HOH HOH . 
F 6 HOH A 73 473 12 HOH HOH . 
F 6 HOH A 74 474 24 HOH HOH . 
F 6 HOH A 75 475 112 HOH HOH . 
F 6 HOH A 76 476 116 HOH HOH . 
F 6 HOH A 77 477 47 HOH HOH . 
F 6 HOH A 78 478 200 HOH HOH . 
F 6 HOH A 79 479 33 HOH HOH . 
F 6 HOH A 80 480 78 HOH HOH . 
F 6 HOH A 81 481 65 HOH HOH . 
F 6 HOH A 82 482 57 HOH HOH . 
F 6 HOH A 83 483 117 HOH HOH . 
F 6 HOH A 84 484 16 HOH HOH . 
F 6 HOH A 85 485 40 HOH HOH . 
F 6 HOH A 86 486 74 HOH HOH . 
F 6 HOH A 87 487 212 HOH HOH . 
F 6 HOH A 88 488 154 HOH HOH . 
F 6 HOH A 89 489 43 HOH HOH . 
F 6 HOH A 90 490 136 HOH HOH . 
F 6 HOH A 91 491 196 HOH HOH . 
F 6 HOH A 92 492 206 HOH HOH . 
F 6 HOH A 93 493 32 HOH HOH . 
F 6 HOH A 94 494 168 HOH HOH . 
F 6 HOH A 95 495 102 HOH HOH . 
F 6 HOH A 96 496 60 HOH HOH . 
F 6 HOH A 97 497 89 HOH HOH . 
F 6 HOH A 98 498 110 HOH HOH . 
F 6 HOH A 99 499 118 HOH HOH . 
F 6 HOH A 100 500 6 HOH HOH . 
F 6 HOH A 101 501 67 HOH HOH . 
F 6 HOH A 102 502 171 HOH HOH . 
F 6 HOH A 103 503 27 HOH HOH . 
F 6 HOH A 104 504 129 HOH HOH . 
F 6 HOH A 105 505 95 HOH HOH . 
F 6 HOH A 106 506 103 HOH HOH . 
F 6 HOH A 107 507 120 HOH HOH . 
F 6 HOH A 108 508 127 HOH HOH . 
F 6 HOH A 109 509 183 HOH HOH . 
F 6 HOH A 110 510 223 HOH HOH . 
F 6 HOH A 111 511 111 HOH HOH . 
F 6 HOH A 112 512 79 HOH HOH . 
F 6 HOH A 113 513 158 HOH HOH . 
F 6 HOH A 114 514 159 HOH HOH . 
F 6 HOH A 115 515 123 HOH HOH . 
F 6 HOH A 116 516 107 HOH HOH . 
F 6 HOH A 117 517 143 HOH HOH . 
F 6 HOH A 118 518 75 HOH HOH . 
F 6 HOH A 119 519 147 HOH HOH . 
F 6 HOH A 120 520 184 HOH HOH . 
F 6 HOH A 121 521 133 HOH HOH . 
F 6 HOH A 122 522 58 HOH HOH . 
F 6 HOH A 123 523 38 HOH HOH . 
F 6 HOH A 124 524 126 HOH HOH . 
F 6 HOH A 125 525 100 HOH HOH . 
F 6 HOH A 126 526 240 HOH HOH . 
F 6 HOH A 127 527 192 HOH HOH . 
F 6 HOH A 128 528 220 HOH HOH . 
F 6 HOH A 129 529 205 HOH HOH . 
F 6 HOH A 130 530 178 HOH HOH . 
F 6 HOH A 131 531 88 HOH HOH . 
F 6 HOH A 132 532 137 HOH HOH . 
F 6 HOH A 133 533 113 HOH HOH . 
F 6 HOH A 134 534 216 HOH HOH . 
F 6 HOH A 135 535 251 HOH HOH . 
F 6 HOH A 136 536 50 HOH HOH . 
F 6 HOH A 137 537 249 HOH HOH . 
F 6 HOH A 138 538 131 HOH HOH . 
F 6 HOH A 139 539 153 HOH HOH . 
F 6 HOH A 140 540 85 HOH HOH . 
F 6 HOH A 141 541 151 HOH HOH . 
F 6 HOH A 142 542 81 HOH HOH . 
F 6 HOH A 143 543 77 HOH HOH . 
F 6 HOH A 144 544 41 HOH HOH . 
F 6 HOH A 145 545 156 HOH HOH . 
F 6 HOH A 146 546 109 HOH HOH . 
F 6 HOH A 147 547 135 HOH HOH . 
F 6 HOH A 148 548 211 HOH HOH . 
F 6 HOH A 149 549 228 HOH HOH . 
F 6 HOH A 150 550 87 HOH HOH . 
F 6 HOH A 151 551 130 HOH HOH . 
F 6 HOH A 152 552 124 HOH HOH . 
F 6 HOH A 153 553 182 HOH HOH . 
F 6 HOH A 154 554 98 HOH HOH . 
F 6 HOH A 155 555 121 HOH HOH . 
F 6 HOH A 156 556 106 HOH HOH . 
F 6 HOH A 157 557 157 HOH HOH . 
F 6 HOH A 158 558 167 HOH HOH . 
F 6 HOH A 159 559 231 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 4 -28.151 61.831 -16.667 1 47.29 ? S DMS 303 A 1 
HETATM 2 O O DMS . . . D 4 -27.688 62.75 -17.746 1 50.54 ? O DMS 303 A 1 
HETATM 3 C C1 DMS . . . D 4 -28.62 62.82 -15.215 1 43.11 ? C1 DMS 303 A 1 
HETATM 4 C C2 DMS . . . D 4 -29.807 61.253 -17.141 1 38.47 ? C2 DMS 303 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#