data_6GDQ # _model_server_result.job_id NeXWVB2ULCMhqul3EU-pzg _model_server_result.datetime_utc '2024-11-14 18:13:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gdq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 6GDQ # _exptl.entry_id 6GDQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.59 _cell.angle_gamma 90 _cell.entry_id 6GDQ _cell.length_a 48.814 _cell.length_b 70.824 _cell.length_c 60.334 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GDQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 168 A THR 160 1_555 A N CME 169 A CME 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CME 169 A CME 161 1_555 A N ASP 170 A ASP 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 373 n n S O2 SO4 doub 374 n n S O3 SO4 sing 375 n n S O4 SO4 sing 376 n n # _atom_sites.entry_id 6GDQ _atom_sites.fract_transf_matrix[1][1] 0.020486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007291 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01412 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 365 SO4 SO4 . C 3 DMS A 1 402 401 DMS DMS . D 2 SO4 A 1 403 1 SO4 SO4 . E 2 SO4 A 1 404 2 SO4 SO4 . F 2 SO4 A 1 405 3 SO4 SO4 . G 2 SO4 A 1 406 4 SO4 SO4 . H 4 EVK A 1 407 1 EVK L01 . I 5 HOH A 1 501 169 HOH HOH . I 5 HOH A 2 502 59 HOH HOH . I 5 HOH A 3 503 49 HOH HOH . I 5 HOH A 4 504 36 HOH HOH . I 5 HOH A 5 505 200 HOH HOH . I 5 HOH A 6 506 89 HOH HOH . I 5 HOH A 7 507 213 HOH HOH . I 5 HOH A 8 508 25 HOH HOH . I 5 HOH A 9 509 32 HOH HOH . I 5 HOH A 10 510 226 HOH HOH . I 5 HOH A 11 511 101 HOH HOH . I 5 HOH A 12 512 188 HOH HOH . I 5 HOH A 13 513 14 HOH HOH . I 5 HOH A 14 514 174 HOH HOH . I 5 HOH A 15 515 234 HOH HOH . I 5 HOH A 16 516 55 HOH HOH . I 5 HOH A 17 517 170 HOH HOH . I 5 HOH A 18 518 31 HOH HOH . I 5 HOH A 19 519 187 HOH HOH . I 5 HOH A 20 520 207 HOH HOH . I 5 HOH A 21 521 206 HOH HOH . I 5 HOH A 22 522 151 HOH HOH . I 5 HOH A 23 523 189 HOH HOH . I 5 HOH A 24 524 29 HOH HOH . I 5 HOH A 25 525 155 HOH HOH . I 5 HOH A 26 526 71 HOH HOH . I 5 HOH A 27 527 81 HOH HOH . I 5 HOH A 28 528 152 HOH HOH . I 5 HOH A 29 529 166 HOH HOH . I 5 HOH A 30 530 27 HOH HOH . I 5 HOH A 31 531 65 HOH HOH . I 5 HOH A 32 532 173 HOH HOH . I 5 HOH A 33 533 199 HOH HOH . I 5 HOH A 34 534 134 HOH HOH . I 5 HOH A 35 535 153 HOH HOH . I 5 HOH A 36 536 16 HOH HOH . I 5 HOH A 37 537 154 HOH HOH . I 5 HOH A 38 538 116 HOH HOH . I 5 HOH A 39 539 159 HOH HOH . I 5 HOH A 40 540 183 HOH HOH . I 5 HOH A 41 541 180 HOH HOH . I 5 HOH A 42 542 182 HOH HOH . I 5 HOH A 43 543 79 HOH HOH . I 5 HOH A 44 544 68 HOH HOH . I 5 HOH A 45 545 239 HOH HOH . I 5 HOH A 46 546 1 HOH HOH . I 5 HOH A 47 547 72 HOH HOH . I 5 HOH A 48 548 164 HOH HOH . I 5 HOH A 49 549 135 HOH HOH . I 5 HOH A 50 550 141 HOH HOH . I 5 HOH A 51 551 165 HOH HOH . I 5 HOH A 52 552 149 HOH HOH . I 5 HOH A 53 553 146 HOH HOH . I 5 HOH A 54 554 172 HOH HOH . I 5 HOH A 55 555 204 HOH HOH . I 5 HOH A 56 556 2 HOH HOH . I 5 HOH A 57 557 53 HOH HOH . I 5 HOH A 58 558 129 HOH HOH . I 5 HOH A 59 559 38 HOH HOH . I 5 HOH A 60 560 7 HOH HOH . I 5 HOH A 61 561 76 HOH HOH . I 5 HOH A 62 562 233 HOH HOH . I 5 HOH A 63 563 106 HOH HOH . I 5 HOH A 64 564 130 HOH HOH . I 5 HOH A 65 565 186 HOH HOH . I 5 HOH A 66 566 43 HOH HOH . I 5 HOH A 67 567 90 HOH HOH . I 5 HOH A 68 568 157 HOH HOH . I 5 HOH A 69 569 66 HOH HOH . I 5 HOH A 70 570 33 HOH HOH . I 5 HOH A 71 571 123 HOH HOH . I 5 HOH A 72 572 126 HOH HOH . I 5 HOH A 73 573 121 HOH HOH . I 5 HOH A 74 574 167 HOH HOH . I 5 HOH A 75 575 161 HOH HOH . I 5 HOH A 76 576 212 HOH HOH . I 5 HOH A 77 577 21 HOH HOH . I 5 HOH A 78 578 64 HOH HOH . I 5 HOH A 79 579 74 HOH HOH . I 5 HOH A 80 580 44 HOH HOH . I 5 HOH A 81 581 13 HOH HOH . I 5 HOH A 82 582 205 HOH HOH . I 5 HOH A 83 583 70 HOH HOH . I 5 HOH A 84 584 178 HOH HOH . I 5 HOH A 85 585 87 HOH HOH . I 5 HOH A 86 586 124 HOH HOH . I 5 HOH A 87 587 232 HOH HOH . I 5 HOH A 88 588 6 HOH HOH . I 5 HOH A 89 589 80 HOH HOH . I 5 HOH A 90 590 11 HOH HOH . I 5 HOH A 91 591 192 HOH HOH . I 5 HOH A 92 592 4 HOH HOH . I 5 HOH A 93 593 47 HOH HOH . I 5 HOH A 94 594 218 HOH HOH . I 5 HOH A 95 595 63 HOH HOH . I 5 HOH A 96 596 9 HOH HOH . I 5 HOH A 97 597 102 HOH HOH . I 5 HOH A 98 598 203 HOH HOH . I 5 HOH A 99 599 19 HOH HOH . I 5 HOH A 100 600 117 HOH HOH . I 5 HOH A 101 601 39 HOH HOH . I 5 HOH A 102 602 109 HOH HOH . I 5 HOH A 103 603 198 HOH HOH . I 5 HOH A 104 604 3 HOH HOH . I 5 HOH A 105 605 118 HOH HOH . I 5 HOH A 106 606 88 HOH HOH . I 5 HOH A 107 607 219 HOH HOH . I 5 HOH A 108 608 41 HOH HOH . I 5 HOH A 109 609 67 HOH HOH . I 5 HOH A 110 610 62 HOH HOH . I 5 HOH A 111 611 136 HOH HOH . I 5 HOH A 112 612 15 HOH HOH . I 5 HOH A 113 613 122 HOH HOH . I 5 HOH A 114 614 201 HOH HOH . I 5 HOH A 115 615 163 HOH HOH . I 5 HOH A 116 616 225 HOH HOH . I 5 HOH A 117 617 185 HOH HOH . I 5 HOH A 118 618 220 HOH HOH . I 5 HOH A 119 619 197 HOH HOH . I 5 HOH A 120 620 26 HOH HOH . I 5 HOH A 121 621 113 HOH HOH . I 5 HOH A 122 622 202 HOH HOH . I 5 HOH A 123 623 34 HOH HOH . I 5 HOH A 124 624 54 HOH HOH . I 5 HOH A 125 625 42 HOH HOH . I 5 HOH A 126 626 17 HOH HOH . I 5 HOH A 127 627 18 HOH HOH . I 5 HOH A 128 628 236 HOH HOH . I 5 HOH A 129 629 238 HOH HOH . I 5 HOH A 130 630 61 HOH HOH . I 5 HOH A 131 631 150 HOH HOH . I 5 HOH A 132 632 108 HOH HOH . I 5 HOH A 133 633 8 HOH HOH . I 5 HOH A 134 634 86 HOH HOH . I 5 HOH A 135 635 128 HOH HOH . I 5 HOH A 136 636 24 HOH HOH . I 5 HOH A 137 637 77 HOH HOH . I 5 HOH A 138 638 209 HOH HOH . I 5 HOH A 139 639 162 HOH HOH . I 5 HOH A 140 640 208 HOH HOH . I 5 HOH A 141 641 58 HOH HOH . I 5 HOH A 142 642 132 HOH HOH . I 5 HOH A 143 643 40 HOH HOH . I 5 HOH A 144 644 78 HOH HOH . I 5 HOH A 145 645 91 HOH HOH . I 5 HOH A 146 646 147 HOH HOH . I 5 HOH A 147 647 94 HOH HOH . I 5 HOH A 148 648 97 HOH HOH . I 5 HOH A 149 649 235 HOH HOH . I 5 HOH A 150 650 12 HOH HOH . I 5 HOH A 151 651 217 HOH HOH . I 5 HOH A 152 652 133 HOH HOH . I 5 HOH A 153 653 10 HOH HOH . I 5 HOH A 154 654 5 HOH HOH . I 5 HOH A 155 655 46 HOH HOH . I 5 HOH A 156 656 35 HOH HOH . I 5 HOH A 157 657 224 HOH HOH . I 5 HOH A 158 658 195 HOH HOH . I 5 HOH A 159 659 96 HOH HOH . I 5 HOH A 160 660 114 HOH HOH . I 5 HOH A 161 661 56 HOH HOH . I 5 HOH A 162 662 215 HOH HOH . I 5 HOH A 163 663 112 HOH HOH . I 5 HOH A 164 664 60 HOH HOH . I 5 HOH A 165 665 222 HOH HOH . I 5 HOH A 166 666 145 HOH HOH . I 5 HOH A 167 667 211 HOH HOH . I 5 HOH A 168 668 23 HOH HOH . I 5 HOH A 169 669 193 HOH HOH . I 5 HOH A 170 670 120 HOH HOH . I 5 HOH A 171 671 103 HOH HOH . I 5 HOH A 172 672 156 HOH HOH . I 5 HOH A 173 673 196 HOH HOH . I 5 HOH A 174 674 231 HOH HOH . I 5 HOH A 175 675 142 HOH HOH . I 5 HOH A 176 676 179 HOH HOH . I 5 HOH A 177 677 210 HOH HOH . I 5 HOH A 178 678 137 HOH HOH . I 5 HOH A 179 679 73 HOH HOH . I 5 HOH A 180 680 214 HOH HOH . I 5 HOH A 181 681 131 HOH HOH . I 5 HOH A 182 682 51 HOH HOH . I 5 HOH A 183 683 237 HOH HOH . I 5 HOH A 184 684 48 HOH HOH . I 5 HOH A 185 685 115 HOH HOH . I 5 HOH A 186 686 20 HOH HOH . I 5 HOH A 187 687 69 HOH HOH . I 5 HOH A 188 688 241 HOH HOH . I 5 HOH A 189 689 221 HOH HOH . I 5 HOH A 190 690 240 HOH HOH . I 5 HOH A 191 691 139 HOH HOH . I 5 HOH A 192 692 30 HOH HOH . I 5 HOH A 193 693 110 HOH HOH . I 5 HOH A 194 694 184 HOH HOH . I 5 HOH A 195 695 181 HOH HOH . I 5 HOH A 196 696 107 HOH HOH . I 5 HOH A 197 697 230 HOH HOH . I 5 HOH A 198 698 22 HOH HOH . I 5 HOH A 199 699 85 HOH HOH . I 5 HOH A 200 700 104 HOH HOH . I 5 HOH A 201 701 100 HOH HOH . I 5 HOH A 202 702 171 HOH HOH . I 5 HOH A 203 703 45 HOH HOH . I 5 HOH A 204 704 98 HOH HOH . I 5 HOH A 205 705 50 HOH HOH . I 5 HOH A 206 706 148 HOH HOH . I 5 HOH A 207 707 160 HOH HOH . I 5 HOH A 208 708 119 HOH HOH . I 5 HOH A 209 709 93 HOH HOH . I 5 HOH A 210 710 92 HOH HOH . I 5 HOH A 211 711 138 HOH HOH . I 5 HOH A 212 712 176 HOH HOH . I 5 HOH A 213 713 223 HOH HOH . I 5 HOH A 214 714 127 HOH HOH . I 5 HOH A 215 715 99 HOH HOH . I 5 HOH A 216 716 227 HOH HOH . I 5 HOH A 217 717 158 HOH HOH . I 5 HOH A 218 718 75 HOH HOH . I 5 HOH A 219 719 83 HOH HOH . I 5 HOH A 220 720 228 HOH HOH . I 5 HOH A 221 721 194 HOH HOH . I 5 HOH A 222 722 111 HOH HOH . I 5 HOH A 223 723 82 HOH HOH . I 5 HOH A 224 724 84 HOH HOH . I 5 HOH A 225 725 191 HOH HOH . I 5 HOH A 226 726 95 HOH HOH . I 5 HOH A 227 727 105 HOH HOH . I 5 HOH A 228 728 57 HOH HOH . I 5 HOH A 229 729 52 HOH HOH . I 5 HOH A 230 730 229 HOH HOH . I 5 HOH A 231 731 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 2 16.561 19.474 48.816 1 112.06 ? S SO4 405 A 1 HETATM 2 O O1 SO4 . . . F 2 16.852 20.846 48.406 1 110.78 ? O1 SO4 405 A 1 HETATM 3 O O2 SO4 . . . F 2 16.377 18.641 47.627 1 112.92 ? O2 SO4 405 A 1 HETATM 4 O O3 SO4 . . . F 2 15.337 19.455 49.604 1 111.07 ? O3 SO4 405 A 1 HETATM 5 O O4 SO4 . . . F 2 17.67 18.949 49.623 1 112.5 ? O4 SO4 405 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 400 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #