data_6GE5 # _model_server_result.job_id 3Qa6KzdGqmOJNtHdf58-SQ _model_server_result.datetime_utc '2024-11-07 12:58:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ge5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6GE5 # _exptl.entry_id 6GE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GE5 _cell.length_a 58.952 _cell.length_b 58.952 _cell.length_c 159.756 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 152 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 367 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id MYR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MYR _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.62 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 237 n n C1 O2 MYR sing 238 n n C1 C2 MYR sing 239 n n O2 HO2 MYR sing 240 n n C2 C3 MYR sing 241 n n C2 H21 MYR sing 242 n n C2 H22 MYR sing 243 n n C3 C4 MYR sing 244 n n C3 H31 MYR sing 245 n n C3 H32 MYR sing 246 n n C4 C5 MYR sing 247 n n C4 H41 MYR sing 248 n n C4 H42 MYR sing 249 n n C5 C6 MYR sing 250 n n C5 H51 MYR sing 251 n n C5 H52 MYR sing 252 n n C6 C7 MYR sing 253 n n C6 H61 MYR sing 254 n n C6 H62 MYR sing 255 n n C7 C8 MYR sing 256 n n C7 H71 MYR sing 257 n n C7 H72 MYR sing 258 n n C8 C9 MYR sing 259 n n C8 H81 MYR sing 260 n n C8 H82 MYR sing 261 n n C9 C10 MYR sing 262 n n C9 H91 MYR sing 263 n n C9 H92 MYR sing 264 n n C10 C11 MYR sing 265 n n C10 H101 MYR sing 266 n n C10 H102 MYR sing 267 n n C11 C12 MYR sing 268 n n C11 H111 MYR sing 269 n n C11 H112 MYR sing 270 n n C12 C13 MYR sing 271 n n C12 H121 MYR sing 272 n n C12 H122 MYR sing 273 n n C13 C14 MYR sing 274 n n C13 H131 MYR sing 275 n n C13 H132 MYR sing 276 n n C14 H141 MYR sing 277 n n C14 H142 MYR sing 278 n n C14 H143 MYR sing 279 n n # _atom_sites.entry_id 6GE5 _atom_sites.fract_transf_matrix[1][1] 0.016963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MYR A 1 501 1 MYR MYR . D 4 HOH A 1 601 101 HOH HOH . D 4 HOH A 2 602 32 HOH HOH . D 4 HOH A 3 603 107 HOH HOH . D 4 HOH A 4 604 35 HOH HOH . D 4 HOH A 5 605 146 HOH HOH . D 4 HOH A 6 606 159 HOH HOH . D 4 HOH A 7 607 59 HOH HOH . D 4 HOH A 8 608 28 HOH HOH . D 4 HOH A 9 609 19 HOH HOH . D 4 HOH A 10 610 55 HOH HOH . D 4 HOH A 11 611 210 HOH HOH . D 4 HOH A 12 612 54 HOH HOH . D 4 HOH A 13 613 72 HOH HOH . D 4 HOH A 14 614 142 HOH HOH . D 4 HOH A 15 615 63 HOH HOH . D 4 HOH A 16 616 124 HOH HOH . D 4 HOH A 17 617 9 HOH HOH . D 4 HOH A 18 618 135 HOH HOH . D 4 HOH A 19 619 1 HOH HOH . D 4 HOH A 20 620 93 HOH HOH . D 4 HOH A 21 621 149 HOH HOH . D 4 HOH A 22 622 125 HOH HOH . D 4 HOH A 23 623 39 HOH HOH . D 4 HOH A 24 624 134 HOH HOH . D 4 HOH A 25 625 104 HOH HOH . D 4 HOH A 26 626 137 HOH HOH . D 4 HOH A 27 627 21 HOH HOH . D 4 HOH A 28 628 141 HOH HOH . D 4 HOH A 29 629 82 HOH HOH . D 4 HOH A 30 630 25 HOH HOH . D 4 HOH A 31 631 4 HOH HOH . D 4 HOH A 32 632 58 HOH HOH . D 4 HOH A 33 633 99 HOH HOH . D 4 HOH A 34 634 112 HOH HOH . D 4 HOH A 35 635 144 HOH HOH . D 4 HOH A 36 636 29 HOH HOH . D 4 HOH A 37 637 106 HOH HOH . D 4 HOH A 38 638 12 HOH HOH . D 4 HOH A 39 639 200 HOH HOH . D 4 HOH A 40 640 11 HOH HOH . D 4 HOH A 41 641 6 HOH HOH . D 4 HOH A 42 642 5 HOH HOH . D 4 HOH A 43 643 64 HOH HOH . D 4 HOH A 44 644 103 HOH HOH . D 4 HOH A 45 645 211 HOH HOH . D 4 HOH A 46 646 8 HOH HOH . D 4 HOH A 47 647 199 HOH HOH . D 4 HOH A 48 648 2 HOH HOH . D 4 HOH A 49 649 151 HOH HOH . D 4 HOH A 50 650 37 HOH HOH . D 4 HOH A 51 651 189 HOH HOH . D 4 HOH A 52 652 36 HOH HOH . D 4 HOH A 53 653 188 HOH HOH . D 4 HOH A 54 654 184 HOH HOH . D 4 HOH A 55 655 73 HOH HOH . D 4 HOH A 56 656 76 HOH HOH . D 4 HOH A 57 657 207 HOH HOH . D 4 HOH A 58 658 40 HOH HOH . D 4 HOH A 59 659 18 HOH HOH . D 4 HOH A 60 660 185 HOH HOH . D 4 HOH A 61 661 168 HOH HOH . D 4 HOH A 62 662 147 HOH HOH . D 4 HOH A 63 663 179 HOH HOH . D 4 HOH A 64 664 190 HOH HOH . D 4 HOH A 65 665 14 HOH HOH . D 4 HOH A 66 666 50 HOH HOH . D 4 HOH A 67 667 161 HOH HOH . D 4 HOH A 68 668 41 HOH HOH . D 4 HOH A 69 669 48 HOH HOH . D 4 HOH A 70 670 157 HOH HOH . D 4 HOH A 71 671 203 HOH HOH . D 4 HOH A 72 672 77 HOH HOH . D 4 HOH A 73 673 140 HOH HOH . D 4 HOH A 74 674 94 HOH HOH . D 4 HOH A 75 675 7 HOH HOH . D 4 HOH A 76 676 68 HOH HOH . D 4 HOH A 77 677 24 HOH HOH . D 4 HOH A 78 678 13 HOH HOH . D 4 HOH A 79 679 216 HOH HOH . D 4 HOH A 80 680 178 HOH HOH . D 4 HOH A 81 681 193 HOH HOH . D 4 HOH A 82 682 180 HOH HOH . D 4 HOH A 83 683 150 HOH HOH . D 4 HOH A 84 684 16 HOH HOH . D 4 HOH A 85 685 26 HOH HOH . D 4 HOH A 86 686 97 HOH HOH . D 4 HOH A 87 687 10 HOH HOH . D 4 HOH A 88 688 61 HOH HOH . D 4 HOH A 89 689 133 HOH HOH . D 4 HOH A 90 690 165 HOH HOH . D 4 HOH A 91 691 196 HOH HOH . D 4 HOH A 92 692 92 HOH HOH . D 4 HOH A 93 693 113 HOH HOH . D 4 HOH A 94 694 81 HOH HOH . D 4 HOH A 95 695 173 HOH HOH . D 4 HOH A 96 696 86 HOH HOH . D 4 HOH A 97 697 143 HOH HOH . D 4 HOH A 98 698 23 HOH HOH . D 4 HOH A 99 699 100 HOH HOH . D 4 HOH A 100 700 42 HOH HOH . D 4 HOH A 101 701 53 HOH HOH . D 4 HOH A 102 702 17 HOH HOH . D 4 HOH A 103 703 181 HOH HOH . D 4 HOH A 104 704 52 HOH HOH . D 4 HOH A 105 705 49 HOH HOH . D 4 HOH A 106 706 194 HOH HOH . D 4 HOH A 107 707 27 HOH HOH . D 4 HOH A 108 708 80 HOH HOH . D 4 HOH A 109 709 33 HOH HOH . D 4 HOH A 110 710 62 HOH HOH . D 4 HOH A 111 711 154 HOH HOH . D 4 HOH A 112 712 153 HOH HOH . D 4 HOH A 113 713 111 HOH HOH . D 4 HOH A 114 714 145 HOH HOH . D 4 HOH A 115 715 148 HOH HOH . D 4 HOH A 116 716 89 HOH HOH . D 4 HOH A 117 717 45 HOH HOH . D 4 HOH A 118 718 30 HOH HOH . D 4 HOH A 119 719 197 HOH HOH . D 4 HOH A 120 720 57 HOH HOH . D 4 HOH A 121 721 198 HOH HOH . D 4 HOH A 122 722 119 HOH HOH . D 4 HOH A 123 723 31 HOH HOH . D 4 HOH A 124 724 65 HOH HOH . D 4 HOH A 125 725 83 HOH HOH . D 4 HOH A 126 726 85 HOH HOH . D 4 HOH A 127 727 67 HOH HOH . D 4 HOH A 128 728 88 HOH HOH . D 4 HOH A 129 729 164 HOH HOH . D 4 HOH A 130 730 66 HOH HOH . D 4 HOH A 131 731 167 HOH HOH . D 4 HOH A 132 732 96 HOH HOH . D 4 HOH A 133 733 3 HOH HOH . D 4 HOH A 134 734 118 HOH HOH . D 4 HOH A 135 735 126 HOH HOH . D 4 HOH A 136 736 117 HOH HOH . D 4 HOH A 137 737 102 HOH HOH . D 4 HOH A 138 738 208 HOH HOH . D 4 HOH A 139 739 187 HOH HOH . D 4 HOH A 140 740 120 HOH HOH . D 4 HOH A 141 741 171 HOH HOH . D 4 HOH A 142 742 202 HOH HOH . D 4 HOH A 143 743 98 HOH HOH . D 4 HOH A 144 744 205 HOH HOH . D 4 HOH A 145 745 158 HOH HOH . D 4 HOH A 146 746 186 HOH HOH . D 4 HOH A 147 747 105 HOH HOH . D 4 HOH A 148 748 109 HOH HOH . D 4 HOH A 149 749 123 HOH HOH . D 4 HOH A 150 750 175 HOH HOH . D 4 HOH A 151 751 215 HOH HOH . D 4 HOH A 152 752 131 HOH HOH . D 4 HOH A 153 753 136 HOH HOH . D 4 HOH A 154 754 160 HOH HOH . D 4 HOH A 155 755 121 HOH HOH . D 4 HOH A 156 756 79 HOH HOH . D 4 HOH A 157 757 162 HOH HOH . D 4 HOH A 158 758 166 HOH HOH . D 4 HOH A 159 759 152 HOH HOH . D 4 HOH A 160 760 128 HOH HOH . D 4 HOH A 161 761 176 HOH HOH . D 4 HOH A 162 762 60 HOH HOH . D 4 HOH A 163 763 155 HOH HOH . D 4 HOH A 164 764 91 HOH HOH . D 4 HOH A 165 765 191 HOH HOH . D 4 HOH A 166 766 114 HOH HOH . D 4 HOH A 167 767 182 HOH HOH . D 4 HOH A 168 768 95 HOH HOH . D 4 HOH A 169 769 195 HOH HOH . D 4 HOH A 170 770 110 HOH HOH . D 4 HOH A 171 771 71 HOH HOH . D 4 HOH A 172 772 46 HOH HOH . D 4 HOH A 173 773 183 HOH HOH . D 4 HOH A 174 774 214 HOH HOH . D 4 HOH A 175 775 206 HOH HOH . D 4 HOH A 176 776 201 HOH HOH . D 4 HOH A 177 777 130 HOH HOH . E 4 HOH L 1 201 116 HOH HOH . E 4 HOH L 2 202 169 HOH HOH . E 4 HOH L 3 203 212 HOH HOH . E 4 HOH L 4 204 47 HOH HOH . E 4 HOH L 5 205 56 HOH HOH . E 4 HOH L 6 206 51 HOH HOH . E 4 HOH L 7 207 209 HOH HOH . E 4 HOH L 8 208 174 HOH HOH . E 4 HOH L 9 209 75 HOH HOH . E 4 HOH L 10 210 38 HOH HOH . E 4 HOH L 11 211 87 HOH HOH . E 4 HOH L 12 212 139 HOH HOH . E 4 HOH L 13 213 44 HOH HOH . E 4 HOH L 14 214 204 HOH HOH . E 4 HOH L 15 215 172 HOH HOH . E 4 HOH L 16 216 90 HOH HOH . E 4 HOH L 17 217 70 HOH HOH . E 4 HOH L 18 218 34 HOH HOH . E 4 HOH L 19 219 15 HOH HOH . E 4 HOH L 20 220 138 HOH HOH . E 4 HOH L 21 221 170 HOH HOH . E 4 HOH L 22 222 20 HOH HOH . E 4 HOH L 23 223 108 HOH HOH . E 4 HOH L 24 224 78 HOH HOH . E 4 HOH L 25 225 43 HOH HOH . E 4 HOH L 26 226 132 HOH HOH . E 4 HOH L 27 227 177 HOH HOH . E 4 HOH L 28 228 122 HOH HOH . E 4 HOH L 29 229 213 HOH HOH . E 4 HOH L 30 230 127 HOH HOH . E 4 HOH L 31 231 22 HOH HOH . E 4 HOH L 32 232 84 HOH HOH . E 4 HOH L 33 233 115 HOH HOH . E 4 HOH L 34 234 156 HOH HOH . E 4 HOH L 35 235 192 HOH HOH . E 4 HOH L 36 236 69 HOH HOH . E 4 HOH L 37 237 74 HOH HOH . E 4 HOH L 38 238 129 HOH HOH . E 4 HOH L 39 239 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 3 7.983 3.855 22.186 1 35.25 ? C1 MYR 501 A 1 HETATM 2 O O1 MYR . . . C 3 9.115 3.605 22.667 1 37.45 ? O1 MYR 501 A 1 HETATM 3 C C2 MYR . . . C 3 7.159 2.714 21.625 1 36.32 ? C2 MYR 501 A 1 HETATM 4 C C3 MYR . . . C 3 6.502 1.902 22.741 1 35.51 ? C3 MYR 501 A 1 HETATM 5 C C4 MYR . . . C 3 5.076 1.511 22.361 1 34.89 ? C4 MYR 501 A 1 HETATM 6 C C5 MYR . . . C 3 4.41 0.677 23.451 1 34.5 ? C5 MYR 501 A 1 HETATM 7 C C6 MYR . . . C 3 3.064 0.129 22.983 1 34.41 ? C6 MYR 501 A 1 HETATM 8 C C7 MYR . . . C 3 1.908 0.727 23.78 1 33.87 ? C7 MYR 501 A 1 HETATM 9 C C8 MYR . . . C 3 0.593 0.672 23.011 1 33.7 ? C8 MYR 501 A 1 HETATM 10 C C9 MYR . . . C 3 0.001 2.068 22.854 1 33.12 ? C9 MYR 501 A 1 HETATM 11 C C10 MYR . . . C 3 -1.52 2.039 22.843 1 32.68 ? C10 MYR 501 A 1 HETATM 12 C C11 MYR . . . C 3 -2.086 3.454 22.82 1 32.83 ? C11 MYR 501 A 1 HETATM 13 C C12 MYR . . . C 3 -3.222 3.577 21.814 1 32.67 ? C12 MYR 501 A 1 HETATM 14 C C13 MYR . . . C 3 -2.83 4.473 20.645 1 33 ? C13 MYR 501 A 1 HETATM 15 C C14 MYR . . . C 3 -3.959 4.554 19.623 1 33.02 ? C14 MYR 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #