data_6GE6 # _model_server_result.job_id S53ir6eRQmyYq4nWSn6Oeg _model_server_result.datetime_utc '2024-11-16 23:48:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ge6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6GE6 # _exptl.entry_id 6GE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GE6 _cell.length_a 58.902 _cell.length_b 58.902 _cell.length_c 158.628 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 152 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 367 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id MYR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MYR _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.774 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 237 n n C1 O2 MYR sing 238 n n C1 C2 MYR sing 239 n n O2 HO2 MYR sing 240 n n C2 C3 MYR sing 241 n n C2 H21 MYR sing 242 n n C2 H22 MYR sing 243 n n C3 C4 MYR sing 244 n n C3 H31 MYR sing 245 n n C3 H32 MYR sing 246 n n C4 C5 MYR sing 247 n n C4 H41 MYR sing 248 n n C4 H42 MYR sing 249 n n C5 C6 MYR sing 250 n n C5 H51 MYR sing 251 n n C5 H52 MYR sing 252 n n C6 C7 MYR sing 253 n n C6 H61 MYR sing 254 n n C6 H62 MYR sing 255 n n C7 C8 MYR sing 256 n n C7 H71 MYR sing 257 n n C7 H72 MYR sing 258 n n C8 C9 MYR sing 259 n n C8 H81 MYR sing 260 n n C8 H82 MYR sing 261 n n C9 C10 MYR sing 262 n n C9 H91 MYR sing 263 n n C9 H92 MYR sing 264 n n C10 C11 MYR sing 265 n n C10 H101 MYR sing 266 n n C10 H102 MYR sing 267 n n C11 C12 MYR sing 268 n n C11 H111 MYR sing 269 n n C11 H112 MYR sing 270 n n C12 C13 MYR sing 271 n n C12 H121 MYR sing 272 n n C12 H122 MYR sing 273 n n C13 C14 MYR sing 274 n n C13 H131 MYR sing 275 n n C13 H132 MYR sing 276 n n C14 H141 MYR sing 277 n n C14 H142 MYR sing 278 n n C14 H143 MYR sing 279 n n # _atom_sites.entry_id 6GE6 _atom_sites.fract_transf_matrix[1][1] 0.016977 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MYR A 1 501 1 MYR MYR . D 4 PO4 A 1 502 1 PO4 PO4 . E 4 PO4 A 1 503 2 PO4 PO4 . F 4 PO4 A 1 504 3 PO4 PO4 . G 4 PO4 A 1 505 4 PO4 PO4 . H 5 HOH A 1 601 115 HOH HOH . H 5 HOH A 2 602 194 HOH HOH . H 5 HOH A 3 603 82 HOH HOH . H 5 HOH A 4 604 36 HOH HOH . H 5 HOH A 5 605 94 HOH HOH . H 5 HOH A 6 606 18 HOH HOH . H 5 HOH A 7 607 124 HOH HOH . H 5 HOH A 8 608 126 HOH HOH . H 5 HOH A 9 609 154 HOH HOH . H 5 HOH A 10 610 100 HOH HOH . H 5 HOH A 11 611 77 HOH HOH . H 5 HOH A 12 612 58 HOH HOH . H 5 HOH A 13 613 78 HOH HOH . H 5 HOH A 14 614 95 HOH HOH . H 5 HOH A 15 615 56 HOH HOH . H 5 HOH A 16 616 54 HOH HOH . H 5 HOH A 17 617 73 HOH HOH . H 5 HOH A 18 618 14 HOH HOH . H 5 HOH A 19 619 51 HOH HOH . H 5 HOH A 20 620 169 HOH HOH . H 5 HOH A 21 621 97 HOH HOH . H 5 HOH A 22 622 84 HOH HOH . H 5 HOH A 23 623 50 HOH HOH . H 5 HOH A 24 624 148 HOH HOH . H 5 HOH A 25 625 6 HOH HOH . H 5 HOH A 26 626 135 HOH HOH . H 5 HOH A 27 627 60 HOH HOH . H 5 HOH A 28 628 160 HOH HOH . H 5 HOH A 29 629 91 HOH HOH . H 5 HOH A 30 630 4 HOH HOH . H 5 HOH A 31 631 34 HOH HOH . H 5 HOH A 32 632 66 HOH HOH . H 5 HOH A 33 633 24 HOH HOH . H 5 HOH A 34 634 53 HOH HOH . H 5 HOH A 35 635 90 HOH HOH . H 5 HOH A 36 636 88 HOH HOH . H 5 HOH A 37 637 37 HOH HOH . H 5 HOH A 38 638 57 HOH HOH . H 5 HOH A 39 639 87 HOH HOH . H 5 HOH A 40 640 38 HOH HOH . H 5 HOH A 41 641 110 HOH HOH . H 5 HOH A 42 642 167 HOH HOH . H 5 HOH A 43 643 98 HOH HOH . H 5 HOH A 44 644 23 HOH HOH . H 5 HOH A 45 645 9 HOH HOH . H 5 HOH A 46 646 188 HOH HOH . H 5 HOH A 47 647 162 HOH HOH . H 5 HOH A 48 648 5 HOH HOH . H 5 HOH A 49 649 203 HOH HOH . H 5 HOH A 50 650 72 HOH HOH . H 5 HOH A 51 651 111 HOH HOH . H 5 HOH A 52 652 191 HOH HOH . H 5 HOH A 53 653 145 HOH HOH . H 5 HOH A 54 654 3 HOH HOH . H 5 HOH A 55 655 81 HOH HOH . H 5 HOH A 56 656 166 HOH HOH . H 5 HOH A 57 657 104 HOH HOH . H 5 HOH A 58 658 70 HOH HOH . H 5 HOH A 59 659 165 HOH HOH . H 5 HOH A 60 660 200 HOH HOH . H 5 HOH A 61 661 113 HOH HOH . H 5 HOH A 62 662 105 HOH HOH . H 5 HOH A 63 663 16 HOH HOH . H 5 HOH A 64 664 76 HOH HOH . H 5 HOH A 65 665 26 HOH HOH . H 5 HOH A 66 666 127 HOH HOH . H 5 HOH A 67 667 153 HOH HOH . H 5 HOH A 68 668 59 HOH HOH . H 5 HOH A 69 669 137 HOH HOH . H 5 HOH A 70 670 93 HOH HOH . H 5 HOH A 71 671 62 HOH HOH . H 5 HOH A 72 672 12 HOH HOH . H 5 HOH A 73 673 116 HOH HOH . H 5 HOH A 74 674 198 HOH HOH . H 5 HOH A 75 675 67 HOH HOH . H 5 HOH A 76 676 21 HOH HOH . H 5 HOH A 77 677 161 HOH HOH . H 5 HOH A 78 678 201 HOH HOH . H 5 HOH A 79 679 1 HOH HOH . H 5 HOH A 80 680 17 HOH HOH . H 5 HOH A 81 681 112 HOH HOH . H 5 HOH A 82 682 30 HOH HOH . H 5 HOH A 83 683 61 HOH HOH . H 5 HOH A 84 684 147 HOH HOH . H 5 HOH A 85 685 199 HOH HOH . H 5 HOH A 86 686 42 HOH HOH . H 5 HOH A 87 687 40 HOH HOH . H 5 HOH A 88 688 2 HOH HOH . H 5 HOH A 89 689 28 HOH HOH . H 5 HOH A 90 690 190 HOH HOH . H 5 HOH A 91 691 22 HOH HOH . H 5 HOH A 92 692 196 HOH HOH . H 5 HOH A 93 693 11 HOH HOH . H 5 HOH A 94 694 197 HOH HOH . H 5 HOH A 95 695 89 HOH HOH . H 5 HOH A 96 696 27 HOH HOH . H 5 HOH A 97 697 68 HOH HOH . H 5 HOH A 98 698 15 HOH HOH . H 5 HOH A 99 699 138 HOH HOH . H 5 HOH A 100 700 29 HOH HOH . H 5 HOH A 101 701 55 HOH HOH . H 5 HOH A 102 702 19 HOH HOH . H 5 HOH A 103 703 125 HOH HOH . H 5 HOH A 104 704 8 HOH HOH . H 5 HOH A 105 705 45 HOH HOH . H 5 HOH A 106 706 202 HOH HOH . H 5 HOH A 107 707 164 HOH HOH . H 5 HOH A 108 708 114 HOH HOH . H 5 HOH A 109 709 65 HOH HOH . H 5 HOH A 110 710 123 HOH HOH . H 5 HOH A 111 711 170 HOH HOH . H 5 HOH A 112 712 64 HOH HOH . H 5 HOH A 113 713 182 HOH HOH . H 5 HOH A 114 714 120 HOH HOH . H 5 HOH A 115 715 176 HOH HOH . H 5 HOH A 116 716 52 HOH HOH . H 5 HOH A 117 717 117 HOH HOH . H 5 HOH A 118 718 157 HOH HOH . H 5 HOH A 119 719 133 HOH HOH . H 5 HOH A 120 720 180 HOH HOH . H 5 HOH A 121 721 10 HOH HOH . H 5 HOH A 122 722 48 HOH HOH . H 5 HOH A 123 723 106 HOH HOH . H 5 HOH A 124 724 175 HOH HOH . H 5 HOH A 125 725 168 HOH HOH . H 5 HOH A 126 726 103 HOH HOH . H 5 HOH A 127 727 204 HOH HOH . H 5 HOH A 128 728 172 HOH HOH . H 5 HOH A 129 729 192 HOH HOH . H 5 HOH A 130 730 149 HOH HOH . H 5 HOH A 131 731 79 HOH HOH . H 5 HOH A 132 732 32 HOH HOH . H 5 HOH A 133 733 132 HOH HOH . H 5 HOH A 134 734 152 HOH HOH . H 5 HOH A 135 735 85 HOH HOH . H 5 HOH A 136 736 141 HOH HOH . H 5 HOH A 137 737 107 HOH HOH . H 5 HOH A 138 738 31 HOH HOH . H 5 HOH A 139 739 144 HOH HOH . H 5 HOH A 140 740 159 HOH HOH . H 5 HOH A 141 741 136 HOH HOH . H 5 HOH A 142 742 130 HOH HOH . H 5 HOH A 143 743 119 HOH HOH . H 5 HOH A 144 744 179 HOH HOH . H 5 HOH A 145 745 69 HOH HOH . H 5 HOH A 146 746 178 HOH HOH . H 5 HOH A 147 747 134 HOH HOH . H 5 HOH A 148 748 80 HOH HOH . H 5 HOH A 149 749 171 HOH HOH . H 5 HOH A 150 750 163 HOH HOH . H 5 HOH A 151 751 184 HOH HOH . H 5 HOH A 152 752 142 HOH HOH . I 5 HOH L 1 201 39 HOH HOH . I 5 HOH L 2 202 20 HOH HOH . I 5 HOH L 3 203 47 HOH HOH . I 5 HOH L 4 204 41 HOH HOH . I 5 HOH L 5 205 46 HOH HOH . I 5 HOH L 6 206 195 HOH HOH . I 5 HOH L 7 207 128 HOH HOH . I 5 HOH L 8 208 121 HOH HOH . I 5 HOH L 9 209 109 HOH HOH . I 5 HOH L 10 210 140 HOH HOH . I 5 HOH L 11 211 173 HOH HOH . I 5 HOH L 12 212 101 HOH HOH . I 5 HOH L 13 213 33 HOH HOH . I 5 HOH L 14 214 129 HOH HOH . I 5 HOH L 15 215 174 HOH HOH . I 5 HOH L 16 216 75 HOH HOH . I 5 HOH L 17 217 158 HOH HOH . I 5 HOH L 18 218 186 HOH HOH . I 5 HOH L 19 219 177 HOH HOH . I 5 HOH L 20 220 43 HOH HOH . I 5 HOH L 21 221 44 HOH HOH . I 5 HOH L 22 222 96 HOH HOH . I 5 HOH L 23 223 185 HOH HOH . I 5 HOH L 24 224 13 HOH HOH . I 5 HOH L 25 225 71 HOH HOH . I 5 HOH L 26 226 193 HOH HOH . I 5 HOH L 27 227 74 HOH HOH . I 5 HOH L 28 228 122 HOH HOH . I 5 HOH L 29 229 63 HOH HOH . I 5 HOH L 30 230 92 HOH HOH . I 5 HOH L 31 231 150 HOH HOH . I 5 HOH L 32 232 86 HOH HOH . I 5 HOH L 33 233 83 HOH HOH . I 5 HOH L 34 234 146 HOH HOH . I 5 HOH L 35 235 118 HOH HOH . I 5 HOH L 36 236 183 HOH HOH . I 5 HOH L 37 237 49 HOH HOH . I 5 HOH L 38 238 108 HOH HOH . I 5 HOH L 39 239 139 HOH HOH . I 5 HOH L 40 240 102 HOH HOH . I 5 HOH L 41 241 131 HOH HOH . I 5 HOH L 42 242 155 HOH HOH . I 5 HOH L 43 243 99 HOH HOH . I 5 HOH L 44 244 35 HOH HOH . I 5 HOH L 45 245 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 3 7.875 3.387 22.09 1 29.95 ? C1 MYR 501 A 1 HETATM 2 O O1 MYR . . . C 3 8.714 3.138 22.927 1 31.91 ? O1 MYR 501 A 1 HETATM 3 C C2 MYR . . . C 3 7.09 2.259 21.475 1 31.32 ? C2 MYR 501 A 1 HETATM 4 C C3 MYR . . . C 3 6.54 1.332 22.562 1 31.74 ? C3 MYR 501 A 1 HETATM 5 C C4 MYR . . . C 3 5.08 1.01 22.248 1 32.13 ? C4 MYR 501 A 1 HETATM 6 C C5 MYR . . . C 3 4.496 0.145 23.366 1 32.39 ? C5 MYR 501 A 1 HETATM 7 C C6 MYR . . . C 3 3.109 -0.357 22.959 1 32.67 ? C6 MYR 501 A 1 HETATM 8 C C7 MYR . . . C 3 2.035 0.496 23.634 1 33 ? C7 MYR 501 A 1 HETATM 9 C C8 MYR . . . C 3 0.683 0.268 22.957 1 32.9 ? C8 MYR 501 A 1 HETATM 10 C C9 MYR . . . C 3 0.128 1.612 22.483 1 33.02 ? C9 MYR 501 A 1 HETATM 11 C C10 MYR . . . C 3 -1.383 1.652 22.706 1 32.82 ? C10 MYR 501 A 1 HETATM 12 C C11 MYR . . . C 3 -1.845 3.11 22.753 1 32.77 ? C11 MYR 501 A 1 HETATM 13 C C12 MYR . . . C 3 -3.115 3.275 21.916 1 32.91 ? C12 MYR 501 A 1 HETATM 14 C C13 MYR . . . C 3 -2.826 4.153 20.696 1 32.93 ? C13 MYR 501 A 1 HETATM 15 C C14 MYR . . . C 3 -3.97 4.002 19.691 1 32.56 ? C14 MYR 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #