data_6GE7 # _model_server_result.job_id -yhhMMb5ZhJNhKqp64UJyA _model_server_result.datetime_utc '2024-11-27 21:13:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ge7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6GE7 # _exptl.entry_id 6GE7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.504 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'nonadecanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GE7 _cell.length_a 53.999 _cell.length_b 53.999 _cell.length_c 111.929 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GE7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? # _chem_comp.formula 'C19 H38 O2' _chem_comp.formula_weight 298.504 _chem_comp.id EW8 _chem_comp.mon_nstd_flag . _chem_comp.name 'nonadecanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 EW8 sing 83 n n O1 C1 EW8 doub 84 n n C18 C17 EW8 sing 85 n n C1 O2 EW8 sing 86 n n C1 C2 EW8 sing 87 n n C17 C16 EW8 sing 88 n n C2 C3 EW8 sing 89 n n C16 C15 EW8 sing 90 n n C14 C13 EW8 sing 91 n n C14 C15 EW8 sing 92 n n C3 C4 EW8 sing 93 n n C13 C12 EW8 sing 94 n n C11 C12 EW8 sing 95 n n C11 C10 EW8 sing 96 n n C8 C9 EW8 sing 97 n n C8 C7 EW8 sing 98 n n C9 C10 EW8 sing 99 n n C5 C4 EW8 sing 100 n n C5 C6 EW8 sing 101 n n C7 C6 EW8 sing 102 n n C4 H1 EW8 sing 103 n n C4 H2 EW8 sing 104 n n C5 H3 EW8 sing 105 n n C5 H4 EW8 sing 106 n n C6 H5 EW8 sing 107 n n C6 H6 EW8 sing 108 n n C7 H7 EW8 sing 109 n n C7 H8 EW8 sing 110 n n C8 H9 EW8 sing 111 n n C8 H10 EW8 sing 112 n n C10 H11 EW8 sing 113 n n C10 H12 EW8 sing 114 n n C13 H13 EW8 sing 115 n n C13 H14 EW8 sing 116 n n C15 H15 EW8 sing 117 n n C15 H16 EW8 sing 118 n n C17 H17 EW8 sing 119 n n C17 H18 EW8 sing 120 n n O2 H19 EW8 sing 121 n n C2 H20 EW8 sing 122 n n C2 H21 EW8 sing 123 n n C3 H22 EW8 sing 124 n n C3 H23 EW8 sing 125 n n C9 H24 EW8 sing 126 n n C9 H25 EW8 sing 127 n n C11 H26 EW8 sing 128 n n C11 H27 EW8 sing 129 n n C12 H28 EW8 sing 130 n n C12 H29 EW8 sing 131 n n C14 H30 EW8 sing 132 n n C14 H31 EW8 sing 133 n n C16 H32 EW8 sing 134 n n C16 H33 EW8 sing 135 n n C18 H34 EW8 sing 136 n n C18 H35 EW8 sing 137 n n C19 H36 EW8 sing 138 n n C19 H37 EW8 sing 139 n n C19 H38 EW8 sing 140 n n # _atom_sites.entry_id 6GE7 _atom_sites.fract_transf_matrix[1][1] 0.018519 _atom_sites.fract_transf_matrix[1][2] 0.010692 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EW8 A 1 201 1 EW8 LIG . C 3 HOH A 1 301 3 HOH HOH . C 3 HOH A 2 302 208 HOH HOH . C 3 HOH A 3 303 211 HOH HOH . C 3 HOH A 4 304 231 HOH HOH . C 3 HOH A 5 305 36 HOH HOH . C 3 HOH A 6 306 17 HOH HOH . C 3 HOH A 7 307 27 HOH HOH . C 3 HOH A 8 308 38 HOH HOH . C 3 HOH A 9 309 42 HOH HOH . C 3 HOH A 10 310 31 HOH HOH . C 3 HOH A 11 311 7 HOH HOH . C 3 HOH A 12 312 21 HOH HOH . C 3 HOH A 13 313 33 HOH HOH . C 3 HOH A 14 314 204 HOH HOH . C 3 HOH A 15 315 57 HOH HOH . C 3 HOH A 16 316 19 HOH HOH . C 3 HOH A 17 317 62 HOH HOH . C 3 HOH A 18 318 12 HOH HOH . C 3 HOH A 19 319 213 HOH HOH . C 3 HOH A 20 320 39 HOH HOH . C 3 HOH A 21 321 14 HOH HOH . C 3 HOH A 22 322 206 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 40 HOH HOH . C 3 HOH A 25 325 85 HOH HOH . C 3 HOH A 26 326 1 HOH HOH . C 3 HOH A 27 327 200 HOH HOH . C 3 HOH A 28 328 15 HOH HOH . C 3 HOH A 29 329 207 HOH HOH . C 3 HOH A 30 330 4 HOH HOH . C 3 HOH A 31 331 201 HOH HOH . C 3 HOH A 32 332 9 HOH HOH . C 3 HOH A 33 333 2 HOH HOH . C 3 HOH A 34 334 68 HOH HOH . C 3 HOH A 35 335 28 HOH HOH . C 3 HOH A 36 336 229 HOH HOH . C 3 HOH A 37 337 13 HOH HOH . C 3 HOH A 38 338 215 HOH HOH . C 3 HOH A 39 339 24 HOH HOH . C 3 HOH A 40 340 20 HOH HOH . C 3 HOH A 41 341 230 HOH HOH . C 3 HOH A 42 342 153 HOH HOH . C 3 HOH A 43 343 212 HOH HOH . C 3 HOH A 44 344 95 HOH HOH . C 3 HOH A 45 345 51 HOH HOH . C 3 HOH A 46 346 205 HOH HOH . C 3 HOH A 47 347 48 HOH HOH . C 3 HOH A 48 348 156 HOH HOH . C 3 HOH A 49 349 185 HOH HOH . C 3 HOH A 50 350 44 HOH HOH . C 3 HOH A 51 351 10 HOH HOH . C 3 HOH A 52 352 169 HOH HOH . C 3 HOH A 53 353 6 HOH HOH . C 3 HOH A 54 354 50 HOH HOH . C 3 HOH A 55 355 26 HOH HOH . C 3 HOH A 56 356 221 HOH HOH . C 3 HOH A 57 357 32 HOH HOH . C 3 HOH A 58 358 35 HOH HOH . C 3 HOH A 59 359 101 HOH HOH . C 3 HOH A 60 360 5 HOH HOH . C 3 HOH A 61 361 132 HOH HOH . C 3 HOH A 62 362 158 HOH HOH . C 3 HOH A 63 363 192 HOH HOH . C 3 HOH A 64 364 149 HOH HOH . C 3 HOH A 65 365 18 HOH HOH . C 3 HOH A 66 366 188 HOH HOH . C 3 HOH A 67 367 43 HOH HOH . C 3 HOH A 68 368 140 HOH HOH . C 3 HOH A 69 369 22 HOH HOH . C 3 HOH A 70 370 199 HOH HOH . C 3 HOH A 71 371 114 HOH HOH . C 3 HOH A 72 372 166 HOH HOH . C 3 HOH A 73 373 197 HOH HOH . C 3 HOH A 74 374 227 HOH HOH . C 3 HOH A 75 375 228 HOH HOH . C 3 HOH A 76 376 145 HOH HOH . C 3 HOH A 77 377 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 EW8 . A . B 2 23.461 49.081 57.049 0.7 59.08 ? C4 EW8 201 A 1 HETATM 2 C C5 EW8 . A . B 2 22.47 47.912 56.995 0.7 55.97 ? C5 EW8 201 A 1 HETATM 3 C C6 EW8 . A . B 2 21.328 48.073 58.001 0.7 52.52 ? C6 EW8 201 A 1 HETATM 4 C C7 EW8 . A . B 2 20.285 46.956 57.869 0.7 48.96 ? C7 EW8 201 A 1 HETATM 5 C C8 EW8 . A . B 2 19.408 47.122 56.614 0.7 46.34 ? C8 EW8 201 A 1 HETATM 6 C C10 EW8 . A . B 2 17.267 48.543 56.984 0.7 37.45 ? C10 EW8 201 A 1 HETATM 7 C C13 EW8 . A . B 2 13.703 49.839 56.029 0.7 26.97 ? C13 EW8 201 A 1 HETATM 8 C C15 EW8 . A . B 2 11.733 51.377 56.076 0.7 24.09 ? C15 EW8 201 A 1 HETATM 9 C C17 EW8 . A . B 2 10.256 51.369 54.048 0.7 23.73 ? C17 EW8 201 A 1 HETATM 10 O O1 EW8 . A . B 2 24.814 49.947 52.882 0.7 72.23 ? O1 EW8 201 A 1 HETATM 11 C C1 EW8 . A . B 2 25.568 49.965 53.887 0.7 71.57 ? C1 EW8 201 A 1 HETATM 12 O O2 EW8 . A . B 2 26.632 50.613 53.989 0.7 70.15 ? O2 EW8 201 A 1 HETATM 13 C C2 EW8 . A . B 2 25.12 49.112 55.127 0.7 67.55 ? C2 EW8 201 A 1 HETATM 14 C C3 EW8 . A . B 2 23.775 49.624 55.653 0.7 63.07 ? C3 EW8 201 A 1 HETATM 15 C C9 EW8 . A . B 2 17.893 47.116 56.924 0.7 41.5 ? C9 EW8 201 A 1 HETATM 16 C C11 EW8 . A . B 2 15.819 48.556 56.455 0.7 33.1 ? C11 EW8 201 A 1 HETATM 17 C C12 EW8 . A . B 2 15.131 49.943 56.519 0.7 29.66 ? C12 EW8 201 A 1 HETATM 18 C C14 EW8 . A . B 2 13.096 51.138 55.537 0.7 25.31 ? C14 EW8 201 A 1 HETATM 19 C C16 EW8 . A . B 2 10.836 52.188 55.172 0.7 24.25 ? C16 EW8 201 A 1 HETATM 20 C C18 EW8 . A . B 2 8.888 51.891 53.659 0.7 23.83 ? C18 EW8 201 A 1 HETATM 21 C C19 EW8 . A . B 2 8.501 51.466 52.247 0.7 24.25 ? C19 EW8 201 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #