data_6GEG # _model_server_result.job_id GeACk3mzrS-vCOGfefXSGg _model_server_result.datetime_utc '2024-11-26 05:29:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6geg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6GEG # _exptl.entry_id 6GEG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GEG _cell.length_a 58.68 _cell.length_b 58.68 _cell.length_c 160.629 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 152 A CYS 367 1_555 C C1 MYR . A MYR 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? covale ? covale2 B C ACE 1 L ACE 59 1_555 B N ASP 2 L ASP 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 243 n n C1 O2 MYR sing 244 n n C1 C2 MYR sing 245 n n O2 HO2 MYR sing 246 n n C2 C3 MYR sing 247 n n C2 H21 MYR sing 248 n n C2 H22 MYR sing 249 n n C3 C4 MYR sing 250 n n C3 H31 MYR sing 251 n n C3 H32 MYR sing 252 n n C4 C5 MYR sing 253 n n C4 H41 MYR sing 254 n n C4 H42 MYR sing 255 n n C5 C6 MYR sing 256 n n C5 H51 MYR sing 257 n n C5 H52 MYR sing 258 n n C6 C7 MYR sing 259 n n C6 H61 MYR sing 260 n n C6 H62 MYR sing 261 n n C7 C8 MYR sing 262 n n C7 H71 MYR sing 263 n n C7 H72 MYR sing 264 n n C8 C9 MYR sing 265 n n C8 H81 MYR sing 266 n n C8 H82 MYR sing 267 n n C9 C10 MYR sing 268 n n C9 H91 MYR sing 269 n n C9 H92 MYR sing 270 n n C10 C11 MYR sing 271 n n C10 H101 MYR sing 272 n n C10 H102 MYR sing 273 n n C11 C12 MYR sing 274 n n C11 H111 MYR sing 275 n n C11 H112 MYR sing 276 n n C12 C13 MYR sing 277 n n C12 H121 MYR sing 278 n n C12 H122 MYR sing 279 n n C13 C14 MYR sing 280 n n C13 H131 MYR sing 281 n n C13 H132 MYR sing 282 n n C14 H141 MYR sing 283 n n C14 H142 MYR sing 284 n n C14 H143 MYR sing 285 n n # _atom_sites.entry_id 6GEG _atom_sites.fract_transf_matrix[1][1] 0.017042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MYR A 1 501 1 MYR MYR . D 4 HOH A 1 601 88 HOH HOH . D 4 HOH A 2 602 55 HOH HOH . D 4 HOH A 3 603 188 HOH HOH . D 4 HOH A 4 604 32 HOH HOH . D 4 HOH A 5 605 14 HOH HOH . D 4 HOH A 6 606 175 HOH HOH . D 4 HOH A 7 607 44 HOH HOH . D 4 HOH A 8 608 69 HOH HOH . D 4 HOH A 9 609 21 HOH HOH . D 4 HOH A 10 610 71 HOH HOH . D 4 HOH A 11 611 142 HOH HOH . D 4 HOH A 12 612 164 HOH HOH . D 4 HOH A 13 613 45 HOH HOH . D 4 HOH A 14 614 2 HOH HOH . D 4 HOH A 15 615 169 HOH HOH . D 4 HOH A 16 616 183 HOH HOH . D 4 HOH A 17 617 160 HOH HOH . D 4 HOH A 18 618 86 HOH HOH . D 4 HOH A 19 619 74 HOH HOH . D 4 HOH A 20 620 50 HOH HOH . D 4 HOH A 21 621 35 HOH HOH . D 4 HOH A 22 622 181 HOH HOH . D 4 HOH A 23 623 168 HOH HOH . D 4 HOH A 24 624 143 HOH HOH . D 4 HOH A 25 625 154 HOH HOH . D 4 HOH A 26 626 39 HOH HOH . D 4 HOH A 27 627 132 HOH HOH . D 4 HOH A 28 628 122 HOH HOH . D 4 HOH A 29 629 182 HOH HOH . D 4 HOH A 30 630 57 HOH HOH . D 4 HOH A 31 631 170 HOH HOH . D 4 HOH A 32 632 48 HOH HOH . D 4 HOH A 33 633 119 HOH HOH . D 4 HOH A 34 634 49 HOH HOH . D 4 HOH A 35 635 61 HOH HOH . D 4 HOH A 36 636 100 HOH HOH . D 4 HOH A 37 637 185 HOH HOH . D 4 HOH A 38 638 110 HOH HOH . D 4 HOH A 39 639 121 HOH HOH . D 4 HOH A 40 640 42 HOH HOH . D 4 HOH A 41 641 1 HOH HOH . D 4 HOH A 42 642 20 HOH HOH . D 4 HOH A 43 643 30 HOH HOH . D 4 HOH A 44 644 193 HOH HOH . D 4 HOH A 45 645 79 HOH HOH . D 4 HOH A 46 646 31 HOH HOH . D 4 HOH A 47 647 59 HOH HOH . D 4 HOH A 48 648 123 HOH HOH . D 4 HOH A 49 649 159 HOH HOH . D 4 HOH A 50 650 24 HOH HOH . D 4 HOH A 51 651 148 HOH HOH . D 4 HOH A 52 652 10 HOH HOH . D 4 HOH A 53 653 176 HOH HOH . D 4 HOH A 54 654 150 HOH HOH . D 4 HOH A 55 655 23 HOH HOH . D 4 HOH A 56 656 162 HOH HOH . D 4 HOH A 57 657 141 HOH HOH . D 4 HOH A 58 658 7 HOH HOH . D 4 HOH A 59 659 95 HOH HOH . D 4 HOH A 60 660 3 HOH HOH . D 4 HOH A 61 661 40 HOH HOH . D 4 HOH A 62 662 38 HOH HOH . D 4 HOH A 63 663 140 HOH HOH . D 4 HOH A 64 664 19 HOH HOH . D 4 HOH A 65 665 126 HOH HOH . D 4 HOH A 66 666 136 HOH HOH . D 4 HOH A 67 667 62 HOH HOH . D 4 HOH A 68 668 9 HOH HOH . D 4 HOH A 69 669 116 HOH HOH . D 4 HOH A 70 670 17 HOH HOH . D 4 HOH A 71 671 78 HOH HOH . D 4 HOH A 72 672 155 HOH HOH . D 4 HOH A 73 673 177 HOH HOH . D 4 HOH A 74 674 83 HOH HOH . D 4 HOH A 75 675 52 HOH HOH . D 4 HOH A 76 676 37 HOH HOH . D 4 HOH A 77 677 8 HOH HOH . D 4 HOH A 78 678 16 HOH HOH . D 4 HOH A 79 679 166 HOH HOH . D 4 HOH A 80 680 36 HOH HOH . D 4 HOH A 81 681 76 HOH HOH . D 4 HOH A 82 682 85 HOH HOH . D 4 HOH A 83 683 149 HOH HOH . D 4 HOH A 84 684 53 HOH HOH . D 4 HOH A 85 685 58 HOH HOH . D 4 HOH A 86 686 107 HOH HOH . D 4 HOH A 87 687 46 HOH HOH . D 4 HOH A 88 688 12 HOH HOH . D 4 HOH A 89 689 128 HOH HOH . D 4 HOH A 90 690 109 HOH HOH . D 4 HOH A 91 691 87 HOH HOH . D 4 HOH A 92 692 113 HOH HOH . D 4 HOH A 93 693 120 HOH HOH . D 4 HOH A 94 694 190 HOH HOH . D 4 HOH A 95 695 179 HOH HOH . D 4 HOH A 96 696 6 HOH HOH . D 4 HOH A 97 697 4 HOH HOH . D 4 HOH A 98 698 75 HOH HOH . D 4 HOH A 99 699 33 HOH HOH . D 4 HOH A 100 700 94 HOH HOH . D 4 HOH A 101 701 67 HOH HOH . D 4 HOH A 102 702 108 HOH HOH . D 4 HOH A 103 703 64 HOH HOH . D 4 HOH A 104 704 34 HOH HOH . D 4 HOH A 105 705 146 HOH HOH . D 4 HOH A 106 706 145 HOH HOH . D 4 HOH A 107 707 178 HOH HOH . D 4 HOH A 108 708 41 HOH HOH . D 4 HOH A 109 709 138 HOH HOH . D 4 HOH A 110 710 72 HOH HOH . D 4 HOH A 111 711 118 HOH HOH . D 4 HOH A 112 712 56 HOH HOH . D 4 HOH A 113 713 25 HOH HOH . D 4 HOH A 114 714 125 HOH HOH . D 4 HOH A 115 715 139 HOH HOH . D 4 HOH A 116 716 103 HOH HOH . D 4 HOH A 117 717 129 HOH HOH . D 4 HOH A 118 718 152 HOH HOH . D 4 HOH A 119 719 81 HOH HOH . D 4 HOH A 120 720 68 HOH HOH . D 4 HOH A 121 721 102 HOH HOH . D 4 HOH A 122 722 187 HOH HOH . D 4 HOH A 123 723 180 HOH HOH . D 4 HOH A 124 724 77 HOH HOH . D 4 HOH A 125 725 163 HOH HOH . D 4 HOH A 126 726 111 HOH HOH . D 4 HOH A 127 727 189 HOH HOH . D 4 HOH A 128 728 99 HOH HOH . D 4 HOH A 129 729 101 HOH HOH . D 4 HOH A 130 730 127 HOH HOH . D 4 HOH A 131 731 153 HOH HOH . D 4 HOH A 132 732 47 HOH HOH . D 4 HOH A 133 733 161 HOH HOH . D 4 HOH A 134 734 80 HOH HOH . D 4 HOH A 135 735 98 HOH HOH . D 4 HOH A 136 736 63 HOH HOH . D 4 HOH A 137 737 115 HOH HOH . D 4 HOH A 138 738 133 HOH HOH . D 4 HOH A 139 739 151 HOH HOH . D 4 HOH A 140 740 84 HOH HOH . D 4 HOH A 141 741 66 HOH HOH . D 4 HOH A 142 742 104 HOH HOH . D 4 HOH A 143 743 158 HOH HOH . D 4 HOH A 144 744 147 HOH HOH . D 4 HOH A 145 745 172 HOH HOH . D 4 HOH A 146 746 130 HOH HOH . D 4 HOH A 147 747 186 HOH HOH . D 4 HOH A 148 748 191 HOH HOH . D 4 HOH A 149 749 114 HOH HOH . D 4 HOH A 150 750 90 HOH HOH . D 4 HOH A 151 751 112 HOH HOH . D 4 HOH A 152 752 89 HOH HOH . D 4 HOH A 153 753 117 HOH HOH . D 4 HOH A 154 754 174 HOH HOH . E 4 HOH L 1 101 43 HOH HOH . E 4 HOH L 2 102 96 HOH HOH . E 4 HOH L 3 103 82 HOH HOH . E 4 HOH L 4 104 27 HOH HOH . E 4 HOH L 5 105 11 HOH HOH . E 4 HOH L 6 106 5 HOH HOH . E 4 HOH L 7 107 93 HOH HOH . E 4 HOH L 8 108 157 HOH HOH . E 4 HOH L 9 109 13 HOH HOH . E 4 HOH L 10 110 131 HOH HOH . E 4 HOH L 11 111 97 HOH HOH . E 4 HOH L 12 112 167 HOH HOH . E 4 HOH L 13 113 26 HOH HOH . E 4 HOH L 14 114 134 HOH HOH . E 4 HOH L 15 115 70 HOH HOH . E 4 HOH L 16 116 60 HOH HOH . E 4 HOH L 17 117 28 HOH HOH . E 4 HOH L 18 118 173 HOH HOH . E 4 HOH L 19 119 51 HOH HOH . E 4 HOH L 20 120 135 HOH HOH . E 4 HOH L 21 121 144 HOH HOH . E 4 HOH L 22 122 15 HOH HOH . E 4 HOH L 23 123 22 HOH HOH . E 4 HOH L 24 124 91 HOH HOH . E 4 HOH L 25 125 105 HOH HOH . E 4 HOH L 26 126 192 HOH HOH . E 4 HOH L 27 127 106 HOH HOH . E 4 HOH L 28 128 92 HOH HOH . E 4 HOH L 29 129 18 HOH HOH . E 4 HOH L 30 130 165 HOH HOH . E 4 HOH L 31 131 171 HOH HOH . E 4 HOH L 32 132 184 HOH HOH . E 4 HOH L 33 133 137 HOH HOH . E 4 HOH L 34 134 124 HOH HOH . E 4 HOH L 35 135 29 HOH HOH . E 4 HOH L 36 136 194 HOH HOH . E 4 HOH L 37 137 156 HOH HOH . E 4 HOH L 38 138 65 HOH HOH . E 4 HOH L 39 139 73 HOH HOH . E 4 HOH L 40 140 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . C 3 7.935 3.711 22.368 1 38.43 ? C1 MYR 501 A 1 HETATM 2 O O1 MYR . . . C 3 8.83 3.478 23.152 1 40.7 ? O1 MYR 501 A 1 HETATM 3 C C2 MYR . . . C 3 7.135 2.562 21.797 1 39.21 ? C2 MYR 501 A 1 HETATM 4 C C3 MYR . . . C 3 6.425 1.819 22.936 1 39.07 ? C3 MYR 501 A 1 HETATM 5 C C4 MYR . . . C 3 4.981 1.497 22.541 1 39.46 ? C4 MYR 501 A 1 HETATM 6 C C5 MYR . . . C 3 4.378 0.555 23.584 1 39.53 ? C5 MYR 501 A 1 HETATM 7 C C6 MYR . . . C 3 3.015 0.053 23.106 1 40.46 ? C6 MYR 501 A 1 HETATM 8 C C7 MYR . . . C 3 1.905 0.676 23.956 1 39.64 ? C7 MYR 501 A 1 HETATM 9 C C8 MYR . . . C 3 0.591 0.692 23.172 1 39.04 ? C8 MYR 501 A 1 HETATM 10 C C9 MYR . . . C 3 0.054 2.12 23.105 1 38.13 ? C9 MYR 501 A 1 HETATM 11 C C10 MYR . . . C 3 -1.47 2.084 23.025 1 38.05 ? C10 MYR 501 A 1 HETATM 12 C C11 MYR . . . C 3 -2.012 3.516 23.057 1 37.75 ? C11 MYR 501 A 1 HETATM 13 C C12 MYR . . . C 3 -3.128 3.67 22.023 1 37.73 ? C12 MYR 501 A 1 HETATM 14 C C13 MYR . . . C 3 -2.627 4.492 20.831 1 38.35 ? C13 MYR 501 A 1 HETATM 15 C C14 MYR . . . C 3 -3.754 4.637 19.804 1 38.43 ? C14 MYR 501 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #