data_6GFS
#
_model_server_result.job_id            WPtS7BCTH82mRkztCCHXiQ 
_model_server_result.datetime_utc      '2024-11-27 21:23:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6gfs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    6GFS 
#
_exptl.entry_id    6GFS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              242.397 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTADECANOIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6GFS 
_cell.length_a            53.277 
_cell.length_b            53.277 
_cell.length_c            111.091 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6GFS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
#
_chem_comp.formula           'C15 H30 O2' 
_chem_comp.formula_weight    242.397 
_chem_comp.id                F15 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTADECANOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O2 F15 sing 83 n n 
C1 O3 F15 doub 84 n n 
C1 C4 F15 sing 85 n n 
O2 HO2 F15 sing 86 n n 
C4 C5 F15 sing 87 n n 
C4 H22 F15 sing 88 n n 
C4 H23 F15 sing 89 n n 
C5 C8 F15 sing 90 n n 
C5 H24 F15 sing 91 n n 
C5 H25 F15 sing 92 n n 
C6 C7 F15 sing 93 n n 
C6 C8 F15 sing 94 n n 
C6 H26 F15 sing 95 n n 
C6 H1 F15 sing 96 n n 
C7 C9 F15 sing 97 n n 
C7 H27 F15 sing 98 n n 
C7 H2 F15 sing 99 n n 
C8 H28 F15 sing 100 n n 
C8 H29 F15 sing 101 n n 
C9 C10 F15 sing 102 n n 
C9 H30 F15 sing 103 n n 
C9 H31 F15 sing 104 n n 
C10 C11 F15 sing 105 n n 
C10 H33 F15 sing 106 n n 
C10 H5 F15 sing 107 n n 
C11 C12 F15 sing 108 n n 
C11 H34 F15 sing 109 n n 
C11 H6 F15 sing 110 n n 
C12 C13 F15 sing 111 n n 
C12 H36 F15 sing 112 n n 
C12 H37 F15 sing 113 n n 
C13 C2 F15 sing 114 n n 
C13 H3 F15 sing 115 n n 
C13 H4 F15 sing 116 n n 
C2 C3 F15 sing 117 n n 
C2 H7 F15 sing 118 n n 
C2 H8 F15 sing 119 n n 
C3 C14 F15 sing 120 n n 
C3 H9 F15 sing 121 n n 
C3 H10 F15 sing 122 n n 
C14 C15 F15 sing 123 n n 
C14 H11 F15 sing 124 n n 
C14 H12 F15 sing 125 n n 
C15 H13 F15 sing 126 n n 
C15 H14 F15 sing 127 n n 
C15 H15 F15 sing 128 n n 
#
_atom_sites.entry_id                     6GFS 
_atom_sites.fract_transf_matrix[1][1]    0.01877 
_atom_sites.fract_transf_matrix[1][2]    0.010837 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021674 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009002 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 F15 A 1 201 163 F15 PND . 
C 3 CL A 1 202 1 CL CL . 
D 4 HOH A 1 301 180 HOH HOH . 
D 4 HOH A 2 302 170 HOH HOH . 
D 4 HOH A 3 303 75 HOH HOH . 
D 4 HOH A 4 304 125 HOH HOH . 
D 4 HOH A 5 305 4 HOH HOH . 
D 4 HOH A 6 306 57 HOH HOH . 
D 4 HOH A 7 307 142 HOH HOH . 
D 4 HOH A 8 308 173 HOH HOH . 
D 4 HOH A 9 309 17 HOH HOH . 
D 4 HOH A 10 310 65 HOH HOH . 
D 4 HOH A 11 311 18 HOH HOH . 
D 4 HOH A 12 312 9 HOH HOH . 
D 4 HOH A 13 313 58 HOH HOH . 
D 4 HOH A 14 314 5 HOH HOH . 
D 4 HOH A 15 315 13 HOH HOH . 
D 4 HOH A 16 316 16 HOH HOH . 
D 4 HOH A 17 317 31 HOH HOH . 
D 4 HOH A 18 318 92 HOH HOH . 
D 4 HOH A 19 319 11 HOH HOH . 
D 4 HOH A 20 320 172 HOH HOH . 
D 4 HOH A 21 321 29 HOH HOH . 
D 4 HOH A 22 322 130 HOH HOH . 
D 4 HOH A 23 323 83 HOH HOH . 
D 4 HOH A 24 324 98 HOH HOH . 
D 4 HOH A 25 325 124 HOH HOH . 
D 4 HOH A 26 326 2 HOH HOH . 
D 4 HOH A 27 327 117 HOH HOH . 
D 4 HOH A 28 328 24 HOH HOH . 
D 4 HOH A 29 329 56 HOH HOH . 
D 4 HOH A 30 330 181 HOH HOH . 
D 4 HOH A 31 331 10 HOH HOH . 
D 4 HOH A 32 332 34 HOH HOH . 
D 4 HOH A 33 333 7 HOH HOH . 
D 4 HOH A 34 334 30 HOH HOH . 
D 4 HOH A 35 335 72 HOH HOH . 
D 4 HOH A 36 336 1 HOH HOH . 
D 4 HOH A 37 337 21 HOH HOH . 
D 4 HOH A 38 338 25 HOH HOH . 
D 4 HOH A 39 339 152 HOH HOH . 
D 4 HOH A 40 340 116 HOH HOH . 
D 4 HOH A 41 341 175 HOH HOH . 
D 4 HOH A 42 342 150 HOH HOH . 
D 4 HOH A 43 343 41 HOH HOH . 
D 4 HOH A 44 344 19 HOH HOH . 
D 4 HOH A 45 345 6 HOH HOH . 
D 4 HOH A 46 346 161 HOH HOH . 
D 4 HOH A 47 347 110 HOH HOH . 
D 4 HOH A 48 348 59 HOH HOH . 
D 4 HOH A 49 349 63 HOH HOH . 
D 4 HOH A 50 350 14 HOH HOH . 
D 4 HOH A 51 351 3 HOH HOH . 
D 4 HOH A 52 352 32 HOH HOH . 
D 4 HOH A 53 353 79 HOH HOH . 
D 4 HOH A 54 354 80 HOH HOH . 
D 4 HOH A 55 355 49 HOH HOH . 
D 4 HOH A 56 356 144 HOH HOH . 
D 4 HOH A 57 357 105 HOH HOH . 
D 4 HOH A 58 358 93 HOH HOH . 
D 4 HOH A 59 359 20 HOH HOH . 
D 4 HOH A 60 360 114 HOH HOH . 
D 4 HOH A 61 361 174 HOH HOH . 
D 4 HOH A 62 362 12 HOH HOH . 
D 4 HOH A 63 363 131 HOH HOH . 
D 4 HOH A 64 364 97 HOH HOH . 
D 4 HOH A 65 365 22 HOH HOH . 
D 4 HOH A 66 366 76 HOH HOH . 
D 4 HOH A 67 367 61 HOH HOH . 
D 4 HOH A 68 368 71 HOH HOH . 
D 4 HOH A 69 369 95 HOH HOH . 
D 4 HOH A 70 370 151 HOH HOH . 
D 4 HOH A 71 371 127 HOH HOH . 
D 4 HOH A 72 372 84 HOH HOH . 
D 4 HOH A 73 373 37 HOH HOH . 
D 4 HOH A 74 374 109 HOH HOH . 
D 4 HOH A 75 375 111 HOH HOH . 
D 4 HOH A 76 376 40 HOH HOH . 
D 4 HOH A 77 377 143 HOH HOH . 
D 4 HOH A 78 378 129 HOH HOH . 
D 4 HOH A 79 379 134 HOH HOH . 
D 4 HOH A 80 380 123 HOH HOH . 
D 4 HOH A 81 381 47 HOH HOH . 
D 4 HOH A 82 382 102 HOH HOH . 
D 4 HOH A 83 383 121 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 F15 . A . B 2 2.562 -0.454 56.722 1 76.04 ? C1 F15 201 A 1 
HETATM 2 O O2 F15 . A . B 2 1.73 -0.176 57.627 1 68.37 ? O2 F15 201 A 1 
HETATM 3 O O3 F15 . A . B 2 2.517 0.063 55.577 1 80.24 ? O3 F15 201 A 1 
HETATM 4 C C4 F15 . A . B 2 3.641 -1.481 57.016 1 65.81 ? C4 F15 201 A 1 
HETATM 5 C C5 F15 . A . B 2 5.004 -1.156 56.399 1 63.49 ? C5 F15 201 A 1 
HETATM 6 C C6 F15 . A . B 2 7.375 -0.296 56.771 1 53.69 ? C6 F15 201 A 1 
HETATM 7 C C7 F15 . A . B 2 8.109 -1.613 56.541 1 46.4 ? C7 F15 201 A 1 
HETATM 8 C C8 F15 . A . B 2 5.992 -0.521 57.381 1 53.88 ? C8 F15 201 A 1 
HETATM 9 C C9 F15 . A . B 2 9.458 -1.397 55.883 1 41.55 ? C9 F15 201 A 1 
HETATM 10 C C10 F15 . A . B 2 10.321 -2.587 56.236 1 37.73 ? C10 F15 201 A 1 
HETATM 11 C C11 F15 . A . B 2 11.614 -2.592 55.461 1 33.93 ? C11 F15 201 A 1 
HETATM 12 C C12 F15 . A . B 2 12.422 -3.841 55.744 1 30.41 ? C12 F15 201 A 1 
HETATM 13 C C13 F15 . A . B 2 13.736 -3.688 54.997 1 31.49 ? C13 F15 201 A 1 
HETATM 14 C C2 F15 . A . B 2 14.617 -4.906 55.121 1 32.37 ? C2 F15 201 A 1 
HETATM 15 C C3 F15 . A . B 2 15.626 -4.779 53.997 1 35.94 ? C3 F15 201 A 1 
HETATM 16 C C14 F15 . A . B 2 16.959 -5.401 54.334 1 35.47 ? C14 F15 201 A 1 
HETATM 17 C C15 F15 . A . B 2 17.83 -5.296 53.109 1 37.16 ? C15 F15 201 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           17 
#