data_6GG3 # _model_server_result.job_id PA15dFJBha3OCHGpmZ1Y1w _model_server_result.datetime_utc '2024-11-04 22:02:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gg3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":602}' # _entry.id 6GG3 # _exptl.entry_id 6GG3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 89.093 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ALANINE _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GG3 _cell.length_a 160.722 _cell.length_b 199.364 _cell.length_c 243.234 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GG3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,M,N,O,P,Q,R,S 1 1 E,F,G,H,T,U,V,W,X,Y,Z,AA 2 1 I,J,K,L,BA,CA,DA,EA,FA,GA,HA,IA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 N N N ? 3 Q N N ? 3 S N N ? 3 U N N ? 3 W N N ? 3 Y N N ? 3 AA N N ? 3 CA N N ? 3 EA N N ? 3 GA N N ? 3 IA N N # _chem_comp.formula 'C3 H7 N O2' _chem_comp.formula_weight 89.093 _chem_comp.id ALA _chem_comp.mon_nstd_flag y _chem_comp.name ALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ALA sing 1 n n N H ALA sing 2 n n N H2 ALA sing 3 n n CA C ALA sing 4 n n CA CB ALA sing 5 n n CA HA ALA sing 6 n n C O ALA doub 7 n n C OXT ALA sing 8 n n CB HB1 ALA sing 9 n n CB HB2 ALA sing 10 n n CB HB3 ALA sing 11 n n OXT HXT ALA sing 12 n n # _atom_sites.entry_id 6GG3 _atom_sites.fract_transf_matrix[1][1] 0.006222 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005016 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 PO4 A 1 601 601 PO4 PO4 . N 3 ALA A 1 602 603 ALA ALA . O 2 PO4 B 1 601 601 PO4 PO4 . P 2 PO4 C 1 601 601 PO4 PO4 . Q 3 ALA C 1 602 603 ALA ALA . R 2 PO4 D 1 601 601 PO4 PO4 . S 3 ALA D 1 602 603 ALA ALA . T 2 PO4 E 1 601 601 PO4 PO4 . U 3 ALA E 1 602 603 ALA ALA . V 2 PO4 F 1 601 601 PO4 PO4 . W 3 ALA F 1 602 603 ALA ALA . X 2 PO4 G 1 601 601 PO4 PO4 . Y 3 ALA G 1 602 603 ALA ALA . Z 2 PO4 H 1 601 601 PO4 PO4 . AA 3 ALA H 1 602 603 ALA ALA . BA 2 PO4 I 1 601 601 PO4 PO4 . CA 3 ALA I 1 602 603 ALA ALA . DA 2 PO4 J 1 601 601 PO4 PO4 . EA 3 ALA J 1 602 603 ALA ALA . FA 2 PO4 K 1 601 601 PO4 PO4 . GA 3 ALA K 1 602 603 ALA ALA . HA 2 PO4 L 1 601 601 PO4 PO4 . IA 3 ALA L 1 602 603 ALA ALA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ALA . . . Y 3 84.477 369.003 1.483 1 112.49 ? N ALA 602 G 1 HETATM 2 C CA ALA . . . Y 3 83.134 368.445 1.164 1 113.53 ? CA ALA 602 G 1 HETATM 3 C C ALA . . . Y 3 82.767 368.432 -0.332 1 114.22 ? C ALA 602 G 1 HETATM 4 O O ALA . . . Y 3 83.691 369.004 -1.262 1 118.85 ? O ALA 602 G 1 HETATM 5 C CB ALA . . . Y 3 82.011 369.097 1.948 1 115.54 ? CB ALA 602 G 1 HETATM 6 O OXT ALA . . . Y 3 81.562 368.012 -0.646 1 110.8 ? OXT ALA 602 G 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #