data_6GGL # _model_server_result.job_id jaxP7IRw7MB940io0lhwCg _model_server_result.datetime_utc '2024-11-29 07:44:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ggl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6GGL # _exptl.entry_id 6GGL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GGL _cell.length_a 61.41 _cell.length_b 100.08 _cell.length_c 107.94 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GGL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 220 A ASN 220 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc2 A OG SER 224 A SER 224 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc3 A OE2 GLU 228 A GLU 228 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc4 C MG MG . A MG 401 1_555 F O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc5 C MG MG . A MG 401 1_555 F O HOH . A HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc6 C MG MG . A MG 401 1_555 F O HOH . A HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc7 B OD1 ASN 220 B ASN 220 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc8 B OG SER 224 B SER 224 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc9 B OE2 GLU 228 B GLU 228 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc10 E MG MG . B MG 401 1_555 G O HOH . B HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc11 E MG MG . B MG 401 1_555 G O HOH . B HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc12 E MG MG . B MG 401 1_555 G O HOH . B HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6GGL _atom_sites.fract_transf_matrix[1][1] 0.016284 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009264 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 2 MG MG . D 3 CL A 1 402 1 CL CL . E 2 MG B 1 401 1 MG MG . F 4 HOH A 1 501 281 HOH HOH . F 4 HOH A 2 502 176 HOH HOH . F 4 HOH A 3 503 134 HOH HOH . F 4 HOH A 4 504 43 HOH HOH . F 4 HOH A 5 505 84 HOH HOH . F 4 HOH A 6 506 28 HOH HOH . F 4 HOH A 7 507 74 HOH HOH . F 4 HOH A 8 508 103 HOH HOH . F 4 HOH A 9 509 70 HOH HOH . F 4 HOH A 10 510 213 HOH HOH . F 4 HOH A 11 511 136 HOH HOH . F 4 HOH A 12 512 77 HOH HOH . F 4 HOH A 13 513 162 HOH HOH . F 4 HOH A 14 514 287 HOH HOH . F 4 HOH A 15 515 95 HOH HOH . F 4 HOH A 16 516 110 HOH HOH . F 4 HOH A 17 517 78 HOH HOH . F 4 HOH A 18 518 222 HOH HOH . F 4 HOH A 19 519 177 HOH HOH . F 4 HOH A 20 520 42 HOH HOH . F 4 HOH A 21 521 12 HOH HOH . F 4 HOH A 22 522 291 HOH HOH . F 4 HOH A 23 523 204 HOH HOH . F 4 HOH A 24 524 37 HOH HOH . F 4 HOH A 25 525 201 HOH HOH . F 4 HOH A 26 526 68 HOH HOH . F 4 HOH A 27 527 54 HOH HOH . F 4 HOH A 28 528 243 HOH HOH . F 4 HOH A 29 529 18 HOH HOH . F 4 HOH A 30 530 154 HOH HOH . F 4 HOH A 31 531 290 HOH HOH . F 4 HOH A 32 532 146 HOH HOH . F 4 HOH A 33 533 133 HOH HOH . F 4 HOH A 34 534 71 HOH HOH . F 4 HOH A 35 535 247 HOH HOH . F 4 HOH A 36 536 20 HOH HOH . F 4 HOH A 37 537 25 HOH HOH . F 4 HOH A 38 538 83 HOH HOH . F 4 HOH A 39 539 30 HOH HOH . F 4 HOH A 40 540 282 HOH HOH . F 4 HOH A 41 541 135 HOH HOH . F 4 HOH A 42 542 14 HOH HOH . F 4 HOH A 43 543 50 HOH HOH . F 4 HOH A 44 544 108 HOH HOH . F 4 HOH A 45 545 203 HOH HOH . F 4 HOH A 46 546 29 HOH HOH . F 4 HOH A 47 547 7 HOH HOH . F 4 HOH A 48 548 284 HOH HOH . F 4 HOH A 49 549 216 HOH HOH . F 4 HOH A 50 550 4 HOH HOH . F 4 HOH A 51 551 142 HOH HOH . F 4 HOH A 52 552 130 HOH HOH . F 4 HOH A 53 553 276 HOH HOH . F 4 HOH A 54 554 171 HOH HOH . F 4 HOH A 55 555 72 HOH HOH . F 4 HOH A 56 556 199 HOH HOH . F 4 HOH A 57 557 63 HOH HOH . F 4 HOH A 58 558 115 HOH HOH . F 4 HOH A 59 559 169 HOH HOH . F 4 HOH A 60 560 125 HOH HOH . F 4 HOH A 61 561 174 HOH HOH . F 4 HOH A 62 562 119 HOH HOH . F 4 HOH A 63 563 8 HOH HOH . F 4 HOH A 64 564 10 HOH HOH . F 4 HOH A 65 565 137 HOH HOH . F 4 HOH A 66 566 159 HOH HOH . F 4 HOH A 67 567 294 HOH HOH . F 4 HOH A 68 568 256 HOH HOH . F 4 HOH A 69 569 82 HOH HOH . F 4 HOH A 70 570 36 HOH HOH . F 4 HOH A 71 571 151 HOH HOH . F 4 HOH A 72 572 41 HOH HOH . F 4 HOH A 73 573 150 HOH HOH . F 4 HOH A 74 574 113 HOH HOH . F 4 HOH A 75 575 48 HOH HOH . F 4 HOH A 76 576 175 HOH HOH . F 4 HOH A 77 577 66 HOH HOH . F 4 HOH A 78 578 39 HOH HOH . F 4 HOH A 79 579 9 HOH HOH . F 4 HOH A 80 580 59 HOH HOH . F 4 HOH A 81 581 5 HOH HOH . F 4 HOH A 82 582 87 HOH HOH . F 4 HOH A 83 583 156 HOH HOH . F 4 HOH A 84 584 245 HOH HOH . F 4 HOH A 85 585 107 HOH HOH . F 4 HOH A 86 586 100 HOH HOH . F 4 HOH A 87 587 275 HOH HOH . F 4 HOH A 88 588 227 HOH HOH . F 4 HOH A 89 589 93 HOH HOH . F 4 HOH A 90 590 22 HOH HOH . F 4 HOH A 91 591 144 HOH HOH . F 4 HOH A 92 592 49 HOH HOH . F 4 HOH A 93 593 234 HOH HOH . F 4 HOH A 94 594 97 HOH HOH . F 4 HOH A 95 595 221 HOH HOH . F 4 HOH A 96 596 128 HOH HOH . F 4 HOH A 97 597 120 HOH HOH . F 4 HOH A 98 598 1 HOH HOH . F 4 HOH A 99 599 140 HOH HOH . F 4 HOH A 100 600 102 HOH HOH . F 4 HOH A 101 601 232 HOH HOH . F 4 HOH A 102 602 75 HOH HOH . F 4 HOH A 103 603 219 HOH HOH . F 4 HOH A 104 604 23 HOH HOH . F 4 HOH A 105 605 104 HOH HOH . F 4 HOH A 106 606 272 HOH HOH . F 4 HOH A 107 607 92 HOH HOH . F 4 HOH A 108 608 241 HOH HOH . F 4 HOH A 109 609 138 HOH HOH . F 4 HOH A 110 610 65 HOH HOH . F 4 HOH A 111 611 273 HOH HOH . F 4 HOH A 112 612 249 HOH HOH . F 4 HOH A 113 613 293 HOH HOH . F 4 HOH A 114 614 46 HOH HOH . F 4 HOH A 115 615 274 HOH HOH . F 4 HOH A 116 616 278 HOH HOH . F 4 HOH A 117 617 145 HOH HOH . F 4 HOH A 118 618 229 HOH HOH . F 4 HOH A 119 619 237 HOH HOH . F 4 HOH A 120 620 235 HOH HOH . F 4 HOH A 121 621 173 HOH HOH . F 4 HOH A 122 622 265 HOH HOH . F 4 HOH A 123 623 212 HOH HOH . F 4 HOH A 124 624 209 HOH HOH . G 4 HOH B 1 501 279 HOH HOH . G 4 HOH B 2 502 195 HOH HOH . G 4 HOH B 3 503 172 HOH HOH . G 4 HOH B 4 504 111 HOH HOH . G 4 HOH B 5 505 101 HOH HOH . G 4 HOH B 6 506 105 HOH HOH . G 4 HOH B 7 507 88 HOH HOH . G 4 HOH B 8 508 251 HOH HOH . G 4 HOH B 9 509 185 HOH HOH . G 4 HOH B 10 510 2 HOH HOH . G 4 HOH B 11 511 35 HOH HOH . G 4 HOH B 12 512 218 HOH HOH . G 4 HOH B 13 513 179 HOH HOH . G 4 HOH B 14 514 196 HOH HOH . G 4 HOH B 15 515 231 HOH HOH . G 4 HOH B 16 516 60 HOH HOH . G 4 HOH B 17 517 98 HOH HOH . G 4 HOH B 18 518 96 HOH HOH . G 4 HOH B 19 519 126 HOH HOH . G 4 HOH B 20 520 131 HOH HOH . G 4 HOH B 21 521 40 HOH HOH . G 4 HOH B 22 522 211 HOH HOH . G 4 HOH B 23 523 170 HOH HOH . G 4 HOH B 24 524 220 HOH HOH . G 4 HOH B 25 525 55 HOH HOH . G 4 HOH B 26 526 85 HOH HOH . G 4 HOH B 27 527 149 HOH HOH . G 4 HOH B 28 528 155 HOH HOH . G 4 HOH B 29 529 194 HOH HOH . G 4 HOH B 30 530 242 HOH HOH . G 4 HOH B 31 531 147 HOH HOH . G 4 HOH B 32 532 112 HOH HOH . G 4 HOH B 33 533 127 HOH HOH . G 4 HOH B 34 534 106 HOH HOH . G 4 HOH B 35 535 163 HOH HOH . G 4 HOH B 36 536 61 HOH HOH . G 4 HOH B 37 537 80 HOH HOH . G 4 HOH B 38 538 166 HOH HOH . G 4 HOH B 39 539 52 HOH HOH . G 4 HOH B 40 540 89 HOH HOH . G 4 HOH B 41 541 53 HOH HOH . G 4 HOH B 42 542 217 HOH HOH . G 4 HOH B 43 543 31 HOH HOH . G 4 HOH B 44 544 253 HOH HOH . G 4 HOH B 45 545 122 HOH HOH . G 4 HOH B 46 546 73 HOH HOH . G 4 HOH B 47 547 15 HOH HOH . G 4 HOH B 48 548 21 HOH HOH . G 4 HOH B 49 549 6 HOH HOH . G 4 HOH B 50 550 271 HOH HOH . G 4 HOH B 51 551 167 HOH HOH . G 4 HOH B 52 552 118 HOH HOH . G 4 HOH B 53 553 57 HOH HOH . G 4 HOH B 54 554 206 HOH HOH . G 4 HOH B 55 555 16 HOH HOH . G 4 HOH B 56 556 62 HOH HOH . G 4 HOH B 57 557 117 HOH HOH . G 4 HOH B 58 558 56 HOH HOH . G 4 HOH B 59 559 19 HOH HOH . G 4 HOH B 60 560 76 HOH HOH . G 4 HOH B 61 561 280 HOH HOH . G 4 HOH B 62 562 17 HOH HOH . G 4 HOH B 63 563 64 HOH HOH . G 4 HOH B 64 564 124 HOH HOH . G 4 HOH B 65 565 3 HOH HOH . G 4 HOH B 66 566 202 HOH HOH . G 4 HOH B 67 567 79 HOH HOH . G 4 HOH B 68 568 44 HOH HOH . G 4 HOH B 69 569 116 HOH HOH . G 4 HOH B 70 570 263 HOH HOH . G 4 HOH B 71 571 47 HOH HOH . G 4 HOH B 72 572 58 HOH HOH . G 4 HOH B 73 573 190 HOH HOH . G 4 HOH B 74 574 114 HOH HOH . G 4 HOH B 75 575 164 HOH HOH . G 4 HOH B 76 576 223 HOH HOH . G 4 HOH B 77 577 69 HOH HOH . G 4 HOH B 78 578 26 HOH HOH . G 4 HOH B 79 579 109 HOH HOH . G 4 HOH B 80 580 32 HOH HOH . G 4 HOH B 81 581 132 HOH HOH . G 4 HOH B 82 582 24 HOH HOH . G 4 HOH B 83 583 34 HOH HOH . G 4 HOH B 84 584 33 HOH HOH . G 4 HOH B 85 585 267 HOH HOH . G 4 HOH B 86 586 236 HOH HOH . G 4 HOH B 87 587 11 HOH HOH . G 4 HOH B 88 588 244 HOH HOH . G 4 HOH B 89 589 51 HOH HOH . G 4 HOH B 90 590 90 HOH HOH . G 4 HOH B 91 591 183 HOH HOH . G 4 HOH B 92 592 67 HOH HOH . G 4 HOH B 93 593 123 HOH HOH . G 4 HOH B 94 594 139 HOH HOH . G 4 HOH B 95 595 45 HOH HOH . G 4 HOH B 96 596 38 HOH HOH . G 4 HOH B 97 597 148 HOH HOH . G 4 HOH B 98 598 129 HOH HOH . G 4 HOH B 99 599 189 HOH HOH . G 4 HOH B 100 600 91 HOH HOH . G 4 HOH B 101 601 86 HOH HOH . G 4 HOH B 102 602 192 HOH HOH . G 4 HOH B 103 603 99 HOH HOH . G 4 HOH B 104 604 193 HOH HOH . G 4 HOH B 105 605 81 HOH HOH . G 4 HOH B 106 606 215 HOH HOH . G 4 HOH B 107 607 261 HOH HOH . G 4 HOH B 108 608 13 HOH HOH . G 4 HOH B 109 609 248 HOH HOH . G 4 HOH B 110 610 262 HOH HOH . G 4 HOH B 111 611 224 HOH HOH . G 4 HOH B 112 612 143 HOH HOH . G 4 HOH B 113 613 27 HOH HOH . G 4 HOH B 114 614 191 HOH HOH . G 4 HOH B 115 615 257 HOH HOH . G 4 HOH B 116 616 250 HOH HOH . G 4 HOH B 117 617 158 HOH HOH . G 4 HOH B 118 618 152 HOH HOH . G 4 HOH B 119 619 246 HOH HOH . G 4 HOH B 120 620 214 HOH HOH . G 4 HOH B 121 621 197 HOH HOH . G 4 HOH B 122 622 187 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -28.017 _atom_site.Cartn_y -10.199 _atom_site.Cartn_z 13.418 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #