data_6GHY # _model_server_result.job_id pNrh6qHZz4mgjt0UESRr4A _model_server_result.datetime_utc '2025-06-23 03:23:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ghy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6GHY # _exptl.entry_id 6GHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GHY _cell.length_a 121.488 _cell.length_b 181.138 _cell.length_c 34.829 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 224 n n C1 C2 PEG sing 225 n n C1 H11 PEG sing 226 n n C1 H12 PEG sing 227 n n O1 HO1 PEG sing 228 n n C2 O2 PEG sing 229 n n C2 H21 PEG sing 230 n n C2 H22 PEG sing 231 n n O2 C3 PEG sing 232 n n C3 C4 PEG sing 233 n n C3 H31 PEG sing 234 n n C3 H32 PEG sing 235 n n C4 O4 PEG sing 236 n n C4 H41 PEG sing 237 n n C4 H42 PEG sing 238 n n O4 HO4 PEG sing 239 n n # _atom_sites.entry_id 6GHY _atom_sites.fract_transf_matrix[1][1] 0.008231 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005521 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG B 1 301 2 PEG PEG . D 2 PEG B 1 302 3 PEG PEG . E 2 PEG A 1 301 1 PEG PEG . F 3 HOH B 1 401 181 HOH HOH . F 3 HOH B 2 402 111 HOH HOH . F 3 HOH B 3 403 291 HOH HOH . F 3 HOH B 4 404 164 HOH HOH . F 3 HOH B 5 405 11 HOH HOH . F 3 HOH B 6 406 54 HOH HOH . F 3 HOH B 7 407 97 HOH HOH . F 3 HOH B 8 408 124 HOH HOH . F 3 HOH B 9 409 20 HOH HOH . F 3 HOH B 10 410 102 HOH HOH . F 3 HOH B 11 411 107 HOH HOH . F 3 HOH B 12 412 61 HOH HOH . F 3 HOH B 13 413 234 HOH HOH . F 3 HOH B 14 414 228 HOH HOH . F 3 HOH B 15 415 84 HOH HOH . F 3 HOH B 16 416 33 HOH HOH . F 3 HOH B 17 417 23 HOH HOH . F 3 HOH B 18 418 55 HOH HOH . F 3 HOH B 19 419 126 HOH HOH . F 3 HOH B 20 420 40 HOH HOH . F 3 HOH B 21 421 96 HOH HOH . F 3 HOH B 22 422 292 HOH HOH . F 3 HOH B 23 423 185 HOH HOH . F 3 HOH B 24 424 46 HOH HOH . F 3 HOH B 25 425 86 HOH HOH . F 3 HOH B 26 426 24 HOH HOH . F 3 HOH B 27 427 60 HOH HOH . F 3 HOH B 28 428 92 HOH HOH . F 3 HOH B 29 429 38 HOH HOH . F 3 HOH B 30 430 56 HOH HOH . F 3 HOH B 31 431 28 HOH HOH . F 3 HOH B 32 432 68 HOH HOH . F 3 HOH B 33 433 158 HOH HOH . F 3 HOH B 34 434 9 HOH HOH . F 3 HOH B 35 435 5 HOH HOH . F 3 HOH B 36 436 226 HOH HOH . F 3 HOH B 37 437 241 HOH HOH . F 3 HOH B 38 438 118 HOH HOH . F 3 HOH B 39 439 132 HOH HOH . F 3 HOH B 40 440 76 HOH HOH . F 3 HOH B 41 441 25 HOH HOH . F 3 HOH B 42 442 14 HOH HOH . F 3 HOH B 43 443 277 HOH HOH . F 3 HOH B 44 444 70 HOH HOH . F 3 HOH B 45 445 8 HOH HOH . F 3 HOH B 46 446 99 HOH HOH . F 3 HOH B 47 447 165 HOH HOH . F 3 HOH B 48 448 141 HOH HOH . F 3 HOH B 49 449 279 HOH HOH . F 3 HOH B 50 450 26 HOH HOH . F 3 HOH B 51 451 53 HOH HOH . F 3 HOH B 52 452 115 HOH HOH . F 3 HOH B 53 453 51 HOH HOH . F 3 HOH B 54 454 52 HOH HOH . F 3 HOH B 55 455 66 HOH HOH . F 3 HOH B 56 456 48 HOH HOH . F 3 HOH B 57 457 15 HOH HOH . F 3 HOH B 58 458 173 HOH HOH . F 3 HOH B 59 459 101 HOH HOH . F 3 HOH B 60 460 140 HOH HOH . F 3 HOH B 61 461 44 HOH HOH . F 3 HOH B 62 462 227 HOH HOH . F 3 HOH B 63 463 114 HOH HOH . F 3 HOH B 64 464 34 HOH HOH . F 3 HOH B 65 465 278 HOH HOH . F 3 HOH B 66 466 67 HOH HOH . F 3 HOH B 67 467 47 HOH HOH . F 3 HOH B 68 468 81 HOH HOH . F 3 HOH B 69 469 6 HOH HOH . F 3 HOH B 70 470 64 HOH HOH . F 3 HOH B 71 471 13 HOH HOH . F 3 HOH B 72 472 3 HOH HOH . F 3 HOH B 73 473 134 HOH HOH . F 3 HOH B 74 474 171 HOH HOH . F 3 HOH B 75 475 188 HOH HOH . F 3 HOH B 76 476 59 HOH HOH . F 3 HOH B 77 477 151 HOH HOH . F 3 HOH B 78 478 280 HOH HOH . F 3 HOH B 79 479 133 HOH HOH . F 3 HOH B 80 480 296 HOH HOH . F 3 HOH B 81 481 289 HOH HOH . F 3 HOH B 82 482 1 HOH HOH . F 3 HOH B 83 483 176 HOH HOH . F 3 HOH B 84 484 91 HOH HOH . F 3 HOH B 85 485 152 HOH HOH . F 3 HOH B 86 486 58 HOH HOH . F 3 HOH B 87 487 160 HOH HOH . F 3 HOH B 88 488 156 HOH HOH . F 3 HOH B 89 489 12 HOH HOH . F 3 HOH B 90 490 174 HOH HOH . F 3 HOH B 91 491 281 HOH HOH . F 3 HOH B 92 492 146 HOH HOH . F 3 HOH B 93 493 182 HOH HOH . F 3 HOH B 94 494 231 HOH HOH . F 3 HOH B 95 495 154 HOH HOH . F 3 HOH B 96 496 116 HOH HOH . F 3 HOH B 97 497 155 HOH HOH . F 3 HOH B 98 498 136 HOH HOH . F 3 HOH B 99 499 290 HOH HOH . F 3 HOH B 100 500 232 HOH HOH . F 3 HOH B 101 501 293 HOH HOH . F 3 HOH B 102 502 159 HOH HOH . F 3 HOH B 103 503 235 HOH HOH . F 3 HOH B 104 504 175 HOH HOH . F 3 HOH B 105 505 166 HOH HOH . F 3 HOH B 106 506 103 HOH HOH . F 3 HOH B 107 507 229 HOH HOH . F 3 HOH B 108 508 143 HOH HOH . F 3 HOH B 109 509 18 HOH HOH . F 3 HOH B 110 510 169 HOH HOH . F 3 HOH B 111 511 168 HOH HOH . F 3 HOH B 112 512 297 HOH HOH . F 3 HOH B 113 513 147 HOH HOH . F 3 HOH B 114 514 187 HOH HOH . F 3 HOH B 115 515 125 HOH HOH . F 3 HOH B 116 516 157 HOH HOH . F 3 HOH B 117 517 237 HOH HOH . F 3 HOH B 118 518 108 HOH HOH . F 3 HOH B 119 519 276 HOH HOH . F 3 HOH B 120 520 179 HOH HOH . F 3 HOH B 121 521 184 HOH HOH . F 3 HOH B 122 522 87 HOH HOH . F 3 HOH B 123 523 271 HOH HOH . F 3 HOH B 124 524 148 HOH HOH . F 3 HOH B 125 525 117 HOH HOH . F 3 HOH B 126 526 170 HOH HOH . F 3 HOH B 127 527 131 HOH HOH . F 3 HOH B 128 528 180 HOH HOH . F 3 HOH B 129 529 186 HOH HOH . F 3 HOH B 130 530 242 HOH HOH . F 3 HOH B 131 531 75 HOH HOH . F 3 HOH B 132 532 275 HOH HOH . F 3 HOH B 133 533 240 HOH HOH . F 3 HOH B 134 534 150 HOH HOH . F 3 HOH B 135 535 149 HOH HOH . G 3 HOH A 1 401 36 HOH HOH . G 3 HOH A 2 402 205 HOH HOH . G 3 HOH A 3 403 193 HOH HOH . G 3 HOH A 4 404 27 HOH HOH . G 3 HOH A 5 405 45 HOH HOH . G 3 HOH A 6 406 200 HOH HOH . G 3 HOH A 7 407 287 HOH HOH . G 3 HOH A 8 408 120 HOH HOH . G 3 HOH A 9 409 269 HOH HOH . G 3 HOH A 10 410 85 HOH HOH . G 3 HOH A 11 411 77 HOH HOH . G 3 HOH A 12 412 261 HOH HOH . G 3 HOH A 13 413 294 HOH HOH . G 3 HOH A 14 414 249 HOH HOH . G 3 HOH A 15 415 65 HOH HOH . G 3 HOH A 16 416 121 HOH HOH . G 3 HOH A 17 417 10 HOH HOH . G 3 HOH A 18 418 135 HOH HOH . G 3 HOH A 19 419 244 HOH HOH . G 3 HOH A 20 420 222 HOH HOH . G 3 HOH A 21 421 88 HOH HOH . G 3 HOH A 22 422 209 HOH HOH . G 3 HOH A 23 423 255 HOH HOH . G 3 HOH A 24 424 274 HOH HOH . G 3 HOH A 25 425 69 HOH HOH . G 3 HOH A 26 426 57 HOH HOH . G 3 HOH A 27 427 93 HOH HOH . G 3 HOH A 28 428 225 HOH HOH . G 3 HOH A 29 429 223 HOH HOH . G 3 HOH A 30 430 128 HOH HOH . G 3 HOH A 31 431 144 HOH HOH . G 3 HOH A 32 432 268 HOH HOH . G 3 HOH A 33 433 104 HOH HOH . G 3 HOH A 34 434 248 HOH HOH . G 3 HOH A 35 435 71 HOH HOH . G 3 HOH A 36 436 195 HOH HOH . G 3 HOH A 37 437 303 HOH HOH . G 3 HOH A 38 438 211 HOH HOH . G 3 HOH A 39 439 94 HOH HOH . G 3 HOH A 40 440 7 HOH HOH . G 3 HOH A 41 441 21 HOH HOH . G 3 HOH A 42 442 207 HOH HOH . G 3 HOH A 43 443 35 HOH HOH . G 3 HOH A 44 444 43 HOH HOH . G 3 HOH A 45 445 89 HOH HOH . G 3 HOH A 46 446 4 HOH HOH . G 3 HOH A 47 447 22 HOH HOH . G 3 HOH A 48 448 194 HOH HOH . G 3 HOH A 49 449 100 HOH HOH . G 3 HOH A 50 450 37 HOH HOH . G 3 HOH A 51 451 304 HOH HOH . G 3 HOH A 52 452 63 HOH HOH . G 3 HOH A 53 453 197 HOH HOH . G 3 HOH A 54 454 273 HOH HOH . G 3 HOH A 55 455 301 HOH HOH . G 3 HOH A 56 456 74 HOH HOH . G 3 HOH A 57 457 42 HOH HOH . G 3 HOH A 58 458 252 HOH HOH . G 3 HOH A 59 459 16 HOH HOH . G 3 HOH A 60 460 17 HOH HOH . G 3 HOH A 61 461 253 HOH HOH . G 3 HOH A 62 462 95 HOH HOH . G 3 HOH A 63 463 82 HOH HOH . G 3 HOH A 64 464 216 HOH HOH . G 3 HOH A 65 465 39 HOH HOH . G 3 HOH A 66 466 219 HOH HOH . G 3 HOH A 67 467 112 HOH HOH . G 3 HOH A 68 468 31 HOH HOH . G 3 HOH A 69 469 50 HOH HOH . G 3 HOH A 70 470 202 HOH HOH . G 3 HOH A 71 471 236 HOH HOH . G 3 HOH A 72 472 263 HOH HOH . G 3 HOH A 73 473 119 HOH HOH . G 3 HOH A 74 474 62 HOH HOH . G 3 HOH A 75 475 196 HOH HOH . G 3 HOH A 76 476 98 HOH HOH . G 3 HOH A 77 477 106 HOH HOH . G 3 HOH A 78 478 110 HOH HOH . G 3 HOH A 79 479 73 HOH HOH . G 3 HOH A 80 480 32 HOH HOH . G 3 HOH A 81 481 251 HOH HOH . G 3 HOH A 82 482 137 HOH HOH . G 3 HOH A 83 483 250 HOH HOH . G 3 HOH A 84 484 129 HOH HOH . G 3 HOH A 85 485 198 HOH HOH . G 3 HOH A 86 486 220 HOH HOH . G 3 HOH A 87 487 19 HOH HOH . G 3 HOH A 88 488 138 HOH HOH . G 3 HOH A 89 489 41 HOH HOH . G 3 HOH A 90 490 260 HOH HOH . G 3 HOH A 91 491 210 HOH HOH . G 3 HOH A 92 492 2 HOH HOH . G 3 HOH A 93 493 127 HOH HOH . G 3 HOH A 94 494 230 HOH HOH . G 3 HOH A 95 495 238 HOH HOH . G 3 HOH A 96 496 122 HOH HOH . G 3 HOH A 97 497 286 HOH HOH . G 3 HOH A 98 498 130 HOH HOH . G 3 HOH A 99 499 270 HOH HOH . G 3 HOH A 100 500 199 HOH HOH . G 3 HOH A 101 501 259 HOH HOH . G 3 HOH A 102 502 302 HOH HOH . G 3 HOH A 103 503 300 HOH HOH . G 3 HOH A 104 504 203 HOH HOH . G 3 HOH A 105 505 221 HOH HOH . G 3 HOH A 106 506 189 HOH HOH . G 3 HOH A 107 507 305 HOH HOH . G 3 HOH A 108 508 245 HOH HOH . G 3 HOH A 109 509 49 HOH HOH . G 3 HOH A 110 510 258 HOH HOH . G 3 HOH A 111 511 247 HOH HOH . G 3 HOH A 112 512 285 HOH HOH . G 3 HOH A 113 513 142 HOH HOH . G 3 HOH A 114 514 192 HOH HOH . G 3 HOH A 115 515 272 HOH HOH . G 3 HOH A 116 516 246 HOH HOH . G 3 HOH A 117 517 233 HOH HOH . G 3 HOH A 118 518 239 HOH HOH . G 3 HOH A 119 519 288 HOH HOH . G 3 HOH A 120 520 212 HOH HOH . G 3 HOH A 121 521 72 HOH HOH . G 3 HOH A 122 522 284 HOH HOH . G 3 HOH A 123 523 308 HOH HOH . G 3 HOH A 124 524 282 HOH HOH . G 3 HOH A 125 525 201 HOH HOH . G 3 HOH A 126 526 283 HOH HOH . G 3 HOH A 127 527 83 HOH HOH . G 3 HOH A 128 528 113 HOH HOH . G 3 HOH A 129 529 215 HOH HOH . G 3 HOH A 130 530 306 HOH HOH . G 3 HOH A 131 531 257 HOH HOH . G 3 HOH A 132 532 217 HOH HOH . G 3 HOH A 133 533 206 HOH HOH . G 3 HOH A 134 534 307 HOH HOH . G 3 HOH A 135 535 29 HOH HOH . G 3 HOH A 136 536 264 HOH HOH . G 3 HOH A 137 537 79 HOH HOH . G 3 HOH A 138 538 204 HOH HOH . G 3 HOH A 139 539 177 HOH HOH . G 3 HOH A 140 540 295 HOH HOH . G 3 HOH A 141 541 78 HOH HOH . G 3 HOH A 142 542 190 HOH HOH . G 3 HOH A 143 543 299 HOH HOH . G 3 HOH A 144 544 256 HOH HOH . G 3 HOH A 145 545 30 HOH HOH . G 3 HOH A 146 546 298 HOH HOH . G 3 HOH A 147 547 266 HOH HOH . G 3 HOH A 148 548 90 HOH HOH . G 3 HOH A 149 549 224 HOH HOH . G 3 HOH A 150 550 172 HOH HOH . G 3 HOH A 151 551 213 HOH HOH . G 3 HOH A 152 552 208 HOH HOH . G 3 HOH A 153 553 265 HOH HOH . G 3 HOH A 154 554 145 HOH HOH . G 3 HOH A 155 555 254 HOH HOH . G 3 HOH A 156 556 139 HOH HOH . G 3 HOH A 157 557 262 HOH HOH . G 3 HOH A 158 558 243 HOH HOH . G 3 HOH A 159 559 218 HOH HOH . G 3 HOH A 160 560 267 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 2 -10.985 -37.966 30.835 1 51.22 ? C1 PEG 301 A 1 HETATM 2 O O1 PEG . . . E 2 -11.324 -37.937 32.216 1 50.68 ? O1 PEG 301 A 1 HETATM 3 C C2 PEG . . . E 2 -9.964 -36.915 30.478 1 50.15 ? C2 PEG 301 A 1 HETATM 4 O O2 PEG . . . E 2 -8.813 -37.481 29.849 1 51.12 ? O2 PEG 301 A 1 HETATM 5 C C3 PEG . . . E 2 -7.621 -36.684 29.934 1 56.63 ? C3 PEG 301 A 1 HETATM 6 C C4 PEG . . . E 2 -7.048 -36.662 31.358 1 60.87 ? C4 PEG 301 A 1 HETATM 7 O O4 PEG . . . E 2 -5.779 -36.015 31.486 1 59.62 ? O4 PEG 301 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #