data_6GI2 # _model_server_result.job_id bjFMaqzsiYblyFUiffaNOA _model_server_result.datetime_utc '2024-11-29 02:21:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gi2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 6GI2 # _exptl.entry_id 6GI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GI2 _cell.length_a 57.794 _cell.length_b 76.602 _cell.length_c 129.867 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,M 1 1 B,G,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C FE FE . A FE 301 1_555 D OAJ 8SW . A 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc2 C FE FE . A FE 301 1_555 D OAI 8SW . A 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc3 C FE FE . A FE 301 1_555 D OAM 8SW . A 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc4 C FE FE . A FE 301 1_555 D OAL 8SW . A 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc5 C FE FE . A FE 301 1_555 D OAH 8SW . A 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc6 C FE FE . A FE 301 1_555 D OAK 8SW . A 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc7 G FE FE . B FE 301 1_555 H OAI 8SW . B 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc8 G FE FE . B FE 301 1_555 H OAL 8SW . B 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc9 G FE FE . B FE 301 1_555 H OAH 8SW . B 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc10 G FE FE . B FE 301 1_555 H OAK 8SW . B 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc11 G FE FE . B FE 301 1_555 H OAM 8SW . B 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc12 G FE FE . B FE 301 1_555 H OAJ 8SW . B 8SW 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 317 n n N O2 NO3 sing 318 n n N O3 NO3 sing 319 n n # _atom_sites.entry_id 6GI2 _atom_sites.fract_transf_matrix[1][1] 0.017303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0077 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 301 1 FE FE . D 3 8SW A 1 302 3 8SW DRG . E 4 NO3 A 1 303 1 NO3 NO3 . F 5 EDO A 1 304 2 EDO EDO . G 2 FE B 1 301 2 FE FE . H 3 8SW B 1 302 2 8SW DRG . I 4 NO3 B 1 303 2 NO3 NO3 . J 5 EDO B 1 304 1 EDO EDO . K 5 EDO B 1 305 3 EDO EDO . L 5 EDO B 1 306 4 EDO EDO . M 6 HOH A 1 401 247 HOH HOH . M 6 HOH A 2 402 106 HOH HOH . M 6 HOH A 3 403 190 HOH HOH . M 6 HOH A 4 404 246 HOH HOH . M 6 HOH A 5 405 65 HOH HOH . M 6 HOH A 6 406 211 HOH HOH . M 6 HOH A 7 407 193 HOH HOH . M 6 HOH A 8 408 221 HOH HOH . M 6 HOH A 9 409 146 HOH HOH . M 6 HOH A 10 410 175 HOH HOH . M 6 HOH A 11 411 200 HOH HOH . M 6 HOH A 12 412 71 HOH HOH . M 6 HOH A 13 413 256 HOH HOH . M 6 HOH A 14 414 38 HOH HOH . M 6 HOH A 15 415 197 HOH HOH . M 6 HOH A 16 416 64 HOH HOH . M 6 HOH A 17 417 6 HOH HOH . M 6 HOH A 18 418 241 HOH HOH . M 6 HOH A 19 419 143 HOH HOH . M 6 HOH A 20 420 202 HOH HOH . M 6 HOH A 21 421 217 HOH HOH . M 6 HOH A 22 422 10 HOH HOH . M 6 HOH A 23 423 281 HOH HOH . M 6 HOH A 24 424 166 HOH HOH . M 6 HOH A 25 425 155 HOH HOH . M 6 HOH A 26 426 127 HOH HOH . M 6 HOH A 27 427 26 HOH HOH . M 6 HOH A 28 428 216 HOH HOH . M 6 HOH A 29 429 3 HOH HOH . M 6 HOH A 30 430 76 HOH HOH . M 6 HOH A 31 431 213 HOH HOH . M 6 HOH A 32 432 8 HOH HOH . M 6 HOH A 33 433 109 HOH HOH . M 6 HOH A 34 434 219 HOH HOH . M 6 HOH A 35 435 69 HOH HOH . M 6 HOH A 36 436 90 HOH HOH . M 6 HOH A 37 437 275 HOH HOH . M 6 HOH A 38 438 118 HOH HOH . M 6 HOH A 39 439 257 HOH HOH . M 6 HOH A 40 440 242 HOH HOH . M 6 HOH A 41 441 51 HOH HOH . M 6 HOH A 42 442 16 HOH HOH . M 6 HOH A 43 443 174 HOH HOH . M 6 HOH A 44 444 91 HOH HOH . M 6 HOH A 45 445 87 HOH HOH . M 6 HOH A 46 446 134 HOH HOH . M 6 HOH A 47 447 75 HOH HOH . M 6 HOH A 48 448 220 HOH HOH . M 6 HOH A 49 449 150 HOH HOH . M 6 HOH A 50 450 25 HOH HOH . M 6 HOH A 51 451 125 HOH HOH . M 6 HOH A 52 452 27 HOH HOH . M 6 HOH A 53 453 28 HOH HOH . M 6 HOH A 54 454 135 HOH HOH . M 6 HOH A 55 455 116 HOH HOH . M 6 HOH A 56 456 187 HOH HOH . M 6 HOH A 57 457 277 HOH HOH . M 6 HOH A 58 458 154 HOH HOH . M 6 HOH A 59 459 153 HOH HOH . M 6 HOH A 60 460 198 HOH HOH . M 6 HOH A 61 461 179 HOH HOH . M 6 HOH A 62 462 276 HOH HOH . M 6 HOH A 63 463 271 HOH HOH . M 6 HOH A 64 464 261 HOH HOH . M 6 HOH A 65 465 54 HOH HOH . M 6 HOH A 66 466 274 HOH HOH . M 6 HOH A 67 467 42 HOH HOH . M 6 HOH A 68 468 147 HOH HOH . M 6 HOH A 69 469 201 HOH HOH . M 6 HOH A 70 470 170 HOH HOH . M 6 HOH A 71 471 92 HOH HOH . M 6 HOH A 72 472 12 HOH HOH . M 6 HOH A 73 473 18 HOH HOH . M 6 HOH A 74 474 259 HOH HOH . M 6 HOH A 75 475 182 HOH HOH . M 6 HOH A 76 476 149 HOH HOH . M 6 HOH A 77 477 59 HOH HOH . M 6 HOH A 78 478 99 HOH HOH . M 6 HOH A 79 479 128 HOH HOH . M 6 HOH A 80 480 32 HOH HOH . M 6 HOH A 81 481 205 HOH HOH . M 6 HOH A 82 482 61 HOH HOH . M 6 HOH A 83 483 203 HOH HOH . M 6 HOH A 84 484 46 HOH HOH . M 6 HOH A 85 485 97 HOH HOH . M 6 HOH A 86 486 245 HOH HOH . M 6 HOH A 87 487 129 HOH HOH . M 6 HOH A 88 488 44 HOH HOH . M 6 HOH A 89 489 162 HOH HOH . M 6 HOH A 90 490 111 HOH HOH . M 6 HOH A 91 491 94 HOH HOH . M 6 HOH A 92 492 95 HOH HOH . M 6 HOH A 93 493 4 HOH HOH . M 6 HOH A 94 494 133 HOH HOH . M 6 HOH A 95 495 268 HOH HOH . M 6 HOH A 96 496 272 HOH HOH . M 6 HOH A 97 497 231 HOH HOH . M 6 HOH A 98 498 98 HOH HOH . M 6 HOH A 99 499 79 HOH HOH . M 6 HOH A 100 500 57 HOH HOH . M 6 HOH A 101 501 82 HOH HOH . M 6 HOH A 102 502 278 HOH HOH . M 6 HOH A 103 503 53 HOH HOH . M 6 HOH A 104 504 227 HOH HOH . M 6 HOH A 105 505 49 HOH HOH . M 6 HOH A 106 506 283 HOH HOH . M 6 HOH A 107 507 180 HOH HOH . M 6 HOH A 108 508 23 HOH HOH . M 6 HOH A 109 509 142 HOH HOH . M 6 HOH A 110 510 152 HOH HOH . M 6 HOH A 111 511 185 HOH HOH . M 6 HOH A 112 512 279 HOH HOH . M 6 HOH A 113 513 282 HOH HOH . M 6 HOH A 114 514 237 HOH HOH . M 6 HOH A 115 515 199 HOH HOH . M 6 HOH A 116 516 265 HOH HOH . M 6 HOH A 117 517 230 HOH HOH . M 6 HOH A 118 518 107 HOH HOH . M 6 HOH A 119 519 189 HOH HOH . M 6 HOH A 120 520 72 HOH HOH . M 6 HOH A 121 521 207 HOH HOH . M 6 HOH A 122 522 238 HOH HOH . M 6 HOH A 123 523 244 HOH HOH . M 6 HOH A 124 524 100 HOH HOH . M 6 HOH A 125 525 196 HOH HOH . M 6 HOH A 126 526 218 HOH HOH . M 6 HOH A 127 527 113 HOH HOH . N 6 HOH B 1 401 233 HOH HOH . N 6 HOH B 2 402 254 HOH HOH . N 6 HOH B 3 403 151 HOH HOH . N 6 HOH B 4 404 195 HOH HOH . N 6 HOH B 5 405 104 HOH HOH . N 6 HOH B 6 406 144 HOH HOH . N 6 HOH B 7 407 105 HOH HOH . N 6 HOH B 8 408 139 HOH HOH . N 6 HOH B 9 409 140 HOH HOH . N 6 HOH B 10 410 181 HOH HOH . N 6 HOH B 11 411 132 HOH HOH . N 6 HOH B 12 412 214 HOH HOH . N 6 HOH B 13 413 191 HOH HOH . N 6 HOH B 14 414 112 HOH HOH . N 6 HOH B 15 415 251 HOH HOH . N 6 HOH B 16 416 62 HOH HOH . N 6 HOH B 17 417 60 HOH HOH . N 6 HOH B 18 418 136 HOH HOH . N 6 HOH B 19 419 93 HOH HOH . N 6 HOH B 20 420 110 HOH HOH . N 6 HOH B 21 421 29 HOH HOH . N 6 HOH B 22 422 86 HOH HOH . N 6 HOH B 23 423 30 HOH HOH . N 6 HOH B 24 424 21 HOH HOH . N 6 HOH B 25 425 250 HOH HOH . N 6 HOH B 26 426 258 HOH HOH . N 6 HOH B 27 427 131 HOH HOH . N 6 HOH B 28 428 120 HOH HOH . N 6 HOH B 29 429 73 HOH HOH . N 6 HOH B 30 430 33 HOH HOH . N 6 HOH B 31 431 5 HOH HOH . N 6 HOH B 32 432 212 HOH HOH . N 6 HOH B 33 433 35 HOH HOH . N 6 HOH B 34 434 138 HOH HOH . N 6 HOH B 35 435 81 HOH HOH . N 6 HOH B 36 436 17 HOH HOH . N 6 HOH B 37 437 235 HOH HOH . N 6 HOH B 38 438 9 HOH HOH . N 6 HOH B 39 439 243 HOH HOH . N 6 HOH B 40 440 117 HOH HOH . N 6 HOH B 41 441 266 HOH HOH . N 6 HOH B 42 442 122 HOH HOH . N 6 HOH B 43 443 40 HOH HOH . N 6 HOH B 44 444 130 HOH HOH . N 6 HOH B 45 445 15 HOH HOH . N 6 HOH B 46 446 239 HOH HOH . N 6 HOH B 47 447 240 HOH HOH . N 6 HOH B 48 448 22 HOH HOH . N 6 HOH B 49 449 1 HOH HOH . N 6 HOH B 50 450 260 HOH HOH . N 6 HOH B 51 451 20 HOH HOH . N 6 HOH B 52 452 263 HOH HOH . N 6 HOH B 53 453 141 HOH HOH . N 6 HOH B 54 454 19 HOH HOH . N 6 HOH B 55 455 55 HOH HOH . N 6 HOH B 56 456 114 HOH HOH . N 6 HOH B 57 457 96 HOH HOH . N 6 HOH B 58 458 36 HOH HOH . N 6 HOH B 59 459 119 HOH HOH . N 6 HOH B 60 460 80 HOH HOH . N 6 HOH B 61 461 160 HOH HOH . N 6 HOH B 62 462 252 HOH HOH . N 6 HOH B 63 463 31 HOH HOH . N 6 HOH B 64 464 176 HOH HOH . N 6 HOH B 65 465 215 HOH HOH . N 6 HOH B 66 466 223 HOH HOH . N 6 HOH B 67 467 102 HOH HOH . N 6 HOH B 68 468 83 HOH HOH . N 6 HOH B 69 469 58 HOH HOH . N 6 HOH B 70 470 186 HOH HOH . N 6 HOH B 71 471 164 HOH HOH . N 6 HOH B 72 472 173 HOH HOH . N 6 HOH B 73 473 74 HOH HOH . N 6 HOH B 74 474 169 HOH HOH . N 6 HOH B 75 475 108 HOH HOH . N 6 HOH B 76 476 37 HOH HOH . N 6 HOH B 77 477 222 HOH HOH . N 6 HOH B 78 478 63 HOH HOH . N 6 HOH B 79 479 126 HOH HOH . N 6 HOH B 80 480 77 HOH HOH . N 6 HOH B 81 481 56 HOH HOH . N 6 HOH B 82 482 34 HOH HOH . N 6 HOH B 83 483 253 HOH HOH . N 6 HOH B 84 484 24 HOH HOH . N 6 HOH B 85 485 89 HOH HOH . N 6 HOH B 86 486 52 HOH HOH . N 6 HOH B 87 487 121 HOH HOH . N 6 HOH B 88 488 188 HOH HOH . N 6 HOH B 89 489 269 HOH HOH . N 6 HOH B 90 490 103 HOH HOH . N 6 HOH B 91 491 84 HOH HOH . N 6 HOH B 92 492 67 HOH HOH . N 6 HOH B 93 493 137 HOH HOH . N 6 HOH B 94 494 39 HOH HOH . N 6 HOH B 95 495 167 HOH HOH . N 6 HOH B 96 496 183 HOH HOH . N 6 HOH B 97 497 161 HOH HOH . N 6 HOH B 98 498 156 HOH HOH . N 6 HOH B 99 499 165 HOH HOH . N 6 HOH B 100 500 101 HOH HOH . N 6 HOH B 101 501 85 HOH HOH . N 6 HOH B 102 502 7 HOH HOH . N 6 HOH B 103 503 13 HOH HOH . N 6 HOH B 104 504 172 HOH HOH . N 6 HOH B 105 505 145 HOH HOH . N 6 HOH B 106 506 273 HOH HOH . N 6 HOH B 107 507 178 HOH HOH . N 6 HOH B 108 508 209 HOH HOH . N 6 HOH B 109 509 208 HOH HOH . N 6 HOH B 110 510 115 HOH HOH . N 6 HOH B 111 511 224 HOH HOH . N 6 HOH B 112 512 267 HOH HOH . N 6 HOH B 113 513 157 HOH HOH . N 6 HOH B 114 514 88 HOH HOH . N 6 HOH B 115 515 232 HOH HOH . N 6 HOH B 116 516 47 HOH HOH . N 6 HOH B 117 517 148 HOH HOH . N 6 HOH B 118 518 229 HOH HOH . N 6 HOH B 119 519 234 HOH HOH . N 6 HOH B 120 520 204 HOH HOH . N 6 HOH B 121 521 194 HOH HOH . N 6 HOH B 122 522 264 HOH HOH . N 6 HOH B 123 523 159 HOH HOH . N 6 HOH B 124 524 225 HOH HOH . N 6 HOH B 125 525 192 HOH HOH . N 6 HOH B 126 526 249 HOH HOH . N 6 HOH B 127 527 43 HOH HOH . N 6 HOH B 128 528 70 HOH HOH . N 6 HOH B 129 529 280 HOH HOH . N 6 HOH B 130 530 123 HOH HOH . N 6 HOH B 131 531 270 HOH HOH . N 6 HOH B 132 532 168 HOH HOH . N 6 HOH B 133 533 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 4 7.915 -3.589 -2.119 1 23.36 ? N NO3 303 A 1 HETATM 2 O O1 NO3 . . . E 4 6.837 -4.176 -2.122 1 27.54 ? O1 NO3 303 A 1 HETATM 3 O O2 NO3 . . . E 4 8.241 -2.741 -3.091 1 23.06 ? O2 NO3 303 A 1 HETATM 4 O O3 NO3 . . . E 4 8.84 -3.719 -1.129 1 22.54 ? O3 NO3 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #