data_6GI6 # _model_server_result.job_id p_JQ513xnXT2FQmJJnzBUg _model_server_result.datetime_utc '2024-10-11 00:31:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gi6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":514}' # _entry.id 6GI6 # _exptl.entry_id 6GI6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GI6 _cell.length_a 66.149 _cell.length_b 66.149 _cell.length_c 145.993 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GI6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6GI6 _atom_sites.fract_transf_matrix[1][1] 0.015117 _atom_sites.fract_transf_matrix[1][2] 0.008728 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EZB A 1 501 1 EZB LH1 . C 3 SO4 A 1 502 1 SO4 SO4 . D 3 SO4 A 1 503 2 SO4 SO4 . E 3 SO4 A 1 504 3 SO4 SO4 . F 3 SO4 A 1 505 4 SO4 SO4 . G 4 EDO A 1 506 2 EDO EDO . H 4 EDO A 1 507 3 EDO EDO . I 4 EDO A 1 508 4 EDO EDO . J 4 EDO A 1 509 5 EDO EDO . K 4 EDO A 1 510 6 EDO EDO . L 4 EDO A 1 511 7 EDO EDO . M 4 EDO A 1 512 9 EDO EDO . N 4 EDO A 1 513 10 EDO EDO . O 4 EDO A 1 514 11 EDO EDO . P 4 EDO A 1 515 12 EDO EDO . Q 5 HOH A 1 601 8 HOH HOH . Q 5 HOH A 2 602 15 HOH HOH . Q 5 HOH A 3 603 194 HOH HOH . Q 5 HOH A 4 604 141 HOH HOH . Q 5 HOH A 5 605 6 HOH HOH . Q 5 HOH A 6 606 1 HOH HOH . Q 5 HOH A 7 607 134 HOH HOH . Q 5 HOH A 8 608 27 HOH HOH . Q 5 HOH A 9 609 70 HOH HOH . Q 5 HOH A 10 610 55 HOH HOH . Q 5 HOH A 11 611 100 HOH HOH . Q 5 HOH A 12 612 110 HOH HOH . Q 5 HOH A 13 613 132 HOH HOH . Q 5 HOH A 14 614 140 HOH HOH . Q 5 HOH A 15 615 89 HOH HOH . Q 5 HOH A 16 616 91 HOH HOH . Q 5 HOH A 17 617 2 HOH HOH . Q 5 HOH A 18 618 46 HOH HOH . Q 5 HOH A 19 619 85 HOH HOH . Q 5 HOH A 20 620 86 HOH HOH . Q 5 HOH A 21 621 18 HOH HOH . Q 5 HOH A 22 622 115 HOH HOH . Q 5 HOH A 23 623 127 HOH HOH . Q 5 HOH A 24 624 25 HOH HOH . Q 5 HOH A 25 625 184 HOH HOH . Q 5 HOH A 26 626 189 HOH HOH . Q 5 HOH A 27 627 49 HOH HOH . Q 5 HOH A 28 628 193 HOH HOH . Q 5 HOH A 29 629 17 HOH HOH . Q 5 HOH A 30 630 104 HOH HOH . Q 5 HOH A 31 631 101 HOH HOH . Q 5 HOH A 32 632 179 HOH HOH . Q 5 HOH A 33 633 3 HOH HOH . Q 5 HOH A 34 634 73 HOH HOH . Q 5 HOH A 35 635 84 HOH HOH . Q 5 HOH A 36 636 16 HOH HOH . Q 5 HOH A 37 637 41 HOH HOH . Q 5 HOH A 38 638 64 HOH HOH . Q 5 HOH A 39 639 188 HOH HOH . Q 5 HOH A 40 640 192 HOH HOH . Q 5 HOH A 41 641 35 HOH HOH . Q 5 HOH A 42 642 72 HOH HOH . Q 5 HOH A 43 643 124 HOH HOH . Q 5 HOH A 44 644 76 HOH HOH . Q 5 HOH A 45 645 44 HOH HOH . Q 5 HOH A 46 646 28 HOH HOH . Q 5 HOH A 47 647 125 HOH HOH . Q 5 HOH A 48 648 98 HOH HOH . Q 5 HOH A 49 649 39 HOH HOH . Q 5 HOH A 50 650 32 HOH HOH . Q 5 HOH A 51 651 150 HOH HOH . Q 5 HOH A 52 652 135 HOH HOH . Q 5 HOH A 53 653 159 HOH HOH . Q 5 HOH A 54 654 128 HOH HOH . Q 5 HOH A 55 655 175 HOH HOH . Q 5 HOH A 56 656 190 HOH HOH . Q 5 HOH A 57 657 174 HOH HOH . Q 5 HOH A 58 658 26 HOH HOH . Q 5 HOH A 59 659 19 HOH HOH . Q 5 HOH A 60 660 88 HOH HOH . Q 5 HOH A 61 661 81 HOH HOH . Q 5 HOH A 62 662 5 HOH HOH . Q 5 HOH A 63 663 92 HOH HOH . Q 5 HOH A 64 664 33 HOH HOH . Q 5 HOH A 65 665 83 HOH HOH . Q 5 HOH A 66 666 53 HOH HOH . Q 5 HOH A 67 667 66 HOH HOH . Q 5 HOH A 68 668 191 HOH HOH . Q 5 HOH A 69 669 75 HOH HOH . Q 5 HOH A 70 670 22 HOH HOH . Q 5 HOH A 71 671 23 HOH HOH . Q 5 HOH A 72 672 173 HOH HOH . Q 5 HOH A 73 673 40 HOH HOH . Q 5 HOH A 74 674 62 HOH HOH . Q 5 HOH A 75 675 109 HOH HOH . Q 5 HOH A 76 676 34 HOH HOH . Q 5 HOH A 77 677 114 HOH HOH . Q 5 HOH A 78 678 94 HOH HOH . Q 5 HOH A 79 679 168 HOH HOH . Q 5 HOH A 80 680 80 HOH HOH . Q 5 HOH A 81 681 126 HOH HOH . Q 5 HOH A 82 682 24 HOH HOH . Q 5 HOH A 83 683 108 HOH HOH . Q 5 HOH A 84 684 95 HOH HOH . Q 5 HOH A 85 685 65 HOH HOH . Q 5 HOH A 86 686 117 HOH HOH . Q 5 HOH A 87 687 36 HOH HOH . Q 5 HOH A 88 688 51 HOH HOH . Q 5 HOH A 89 689 119 HOH HOH . Q 5 HOH A 90 690 79 HOH HOH . Q 5 HOH A 91 691 99 HOH HOH . Q 5 HOH A 92 692 129 HOH HOH . Q 5 HOH A 93 693 61 HOH HOH . Q 5 HOH A 94 694 169 HOH HOH . Q 5 HOH A 95 695 195 HOH HOH . Q 5 HOH A 96 696 164 HOH HOH . Q 5 HOH A 97 697 158 HOH HOH . Q 5 HOH A 98 698 67 HOH HOH . Q 5 HOH A 99 699 161 HOH HOH . Q 5 HOH A 100 700 68 HOH HOH . Q 5 HOH A 101 701 123 HOH HOH . Q 5 HOH A 102 702 166 HOH HOH . Q 5 HOH A 103 703 145 HOH HOH . Q 5 HOH A 104 704 138 HOH HOH . Q 5 HOH A 105 705 172 HOH HOH . Q 5 HOH A 106 706 74 HOH HOH . Q 5 HOH A 107 707 111 HOH HOH . Q 5 HOH A 108 708 116 HOH HOH . Q 5 HOH A 109 709 107 HOH HOH . Q 5 HOH A 110 710 59 HOH HOH . Q 5 HOH A 111 711 148 HOH HOH . Q 5 HOH A 112 712 142 HOH HOH . Q 5 HOH A 113 713 71 HOH HOH . Q 5 HOH A 114 714 176 HOH HOH . Q 5 HOH A 115 715 139 HOH HOH . Q 5 HOH A 116 716 77 HOH HOH . Q 5 HOH A 117 717 151 HOH HOH . Q 5 HOH A 118 718 57 HOH HOH . Q 5 HOH A 119 719 37 HOH HOH . Q 5 HOH A 120 720 106 HOH HOH . Q 5 HOH A 121 721 90 HOH HOH . Q 5 HOH A 122 722 137 HOH HOH . Q 5 HOH A 123 723 120 HOH HOH . Q 5 HOH A 124 724 10 HOH HOH . Q 5 HOH A 125 725 20 HOH HOH . Q 5 HOH A 126 726 21 HOH HOH . Q 5 HOH A 127 727 165 HOH HOH . Q 5 HOH A 128 728 155 HOH HOH . Q 5 HOH A 129 729 12 HOH HOH . Q 5 HOH A 130 730 113 HOH HOH . Q 5 HOH A 131 731 154 HOH HOH . Q 5 HOH A 132 732 82 HOH HOH . Q 5 HOH A 133 733 163 HOH HOH . Q 5 HOH A 134 734 197 HOH HOH . Q 5 HOH A 135 735 196 HOH HOH . Q 5 HOH A 136 736 160 HOH HOH . Q 5 HOH A 137 737 45 HOH HOH . Q 5 HOH A 138 738 63 HOH HOH . Q 5 HOH A 139 739 182 HOH HOH . Q 5 HOH A 140 740 130 HOH HOH . Q 5 HOH A 141 741 187 HOH HOH . Q 5 HOH A 142 742 178 HOH HOH . Q 5 HOH A 143 743 54 HOH HOH . Q 5 HOH A 144 744 180 HOH HOH . Q 5 HOH A 145 745 144 HOH HOH . Q 5 HOH A 146 746 153 HOH HOH . Q 5 HOH A 147 747 171 HOH HOH . Q 5 HOH A 148 748 152 HOH HOH . Q 5 HOH A 149 749 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . O 4 -17.429 159.527 132.852 1 31.67 ? C1 EDO 514 A 1 HETATM 2 O O1 EDO . . . O 4 -16.187 160.227 132.724 1 42.6 ? O1 EDO 514 A 1 HETATM 3 C C2 EDO . . . O 4 -17.155 158.034 132.751 1 30.62 ? C2 EDO 514 A 1 HETATM 4 O O2 EDO . . . O 4 -16.101 157.69 133.658 1 31.01 ? O2 EDO 514 A 1 HETATM 5 H H11 EDO . . . O 4 -17.894 159.759 133.812 1 38.1 ? H11 EDO 514 A 1 HETATM 6 H H12 EDO . . . O 4 -18.117 159.836 132.062 1 38.1 ? H12 EDO 514 A 1 HETATM 7 H HO1 EDO . . . O 4 -16.354 161.18 132.707 1 51.22 ? HO1 EDO 514 A 1 HETATM 8 H H21 EDO . . . O 4 -18.058 157.471 132.998 1 36.84 ? H21 EDO 514 A 1 HETATM 9 H H22 EDO . . . O 4 -16.868 157.776 131.73 1 36.84 ? H22 EDO 514 A 1 HETATM 10 H HO2 EDO . . . O 4 -15.905 156.746 133.581 1 37.31 ? HO2 EDO 514 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #