data_6GIQ # _model_server_result.job_id Rrlz7Sxy_CjaVMOB15Y1_g _model_server_result.datetime_utc '2024-11-21 14:37:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6giq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"OA","auth_seq_id":301}' # _entry.id 6GIQ # _exptl.entry_id 6GIQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 175.82 _entity.id 29 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GIQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 32-meric _pdbx_struct_assembly.oligomeric_count 32 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 29 OA N N ? 29 AB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 164 E CYS 164 1_555 E SG CYS 180 E CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 F SG CYS 101 F CYS 101 1_555 F SG CYS 123 F CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 N SG CYS 164 P CYS 164 1_555 N SG CYS 180 P CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 O SG CYS 101 Q CYS 101 1_555 O SG CYS 123 Q CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 DA SG CYS 27 j CYS 27 1_555 DA SG CYS 59 j CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 DA SG CYS 37 j CYS 37 1_555 DA SG CYS 48 j CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 C NE2 HIS 82 C HIS 82 1_555 HA FE HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc2 C NE2 HIS 96 C HIS 96 1_555 IA FE HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 HA FE HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 IA FE HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc5 D NE2 HIS 105 D HIS 105 1_555 MA FE HEC . D HEC 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc6 L NE2 HIS 82 N HIS 82 1_555 SA FE HEC . N HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc7 L NE2 HIS 96 N HIS 96 1_555 TA FE HEC . N HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc8 L NE2 HIS 183 N HIS 183 1_555 SA FE HEC . N HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc9 L NE2 HIS 197 N HIS 197 1_555 TA FE HEC . N HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc10 M NE2 HIS 105 O HIS 105 1_555 YA FE HEC . O HEC 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc11 U NE2 HIS 62 a HIS 62 1_555 DB FE HEA . a HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc12 U ND1 HIS 241 a HIS 241 1_555 CB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc13 U NE2 HIS 291 a HIS 291 1_555 CB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc14 U NE2 HIS 378 a HIS 378 1_555 DB FE HEA . a HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 711 n n FE1 S2 FES sing 712 n n FE2 S1 FES sing 713 n n FE2 S2 FES sing 714 n n # _atom_sites.entry_id 6GIQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code GA 23 6PH C 1 401 4013 6PH 6PH . HA 24 HEC C 1 402 4001 HEC HEM . IA 24 HEC C 1 403 4002 HEC HEM . JA 25 8PE C 1 404 4010 8PE 8PE . KA 26 CN5 C 1 405 4033 CN5 CN5 . LA 27 UQ6 C 1 406 4034 UQ6 UQ6 . MA 24 HEC D 1 401 4003 HEC HEM . NA 28 7PH D 1 402 4014 7PH 7PH . OA 29 FES E 1 301 4004 FES FES . PA 30 PCF I 1 101 4012 PCF PCF . QA 31 9PE N 1 401 4011 9PE 9PE . RA 23 6PH N 1 402 4113 6PH 6PH . SA 24 HEC N 1 403 4021 HEC HEM . TA 24 HEC N 1 404 4022 HEC HEM . UA 27 UQ6 N 1 405 4023 UQ6 UQ6 . VA 25 8PE N 1 406 4110 8PE 8PE . WA 31 9PE N 1 407 4111 9PE 9PE . XA 32 CN3 N 1 408 4131 CN3 CN3 . YA 24 HEC O 1 401 4023 HEC HEM . ZA 28 7PH P 1 301 4114 7PH 7PH . AB 29 FES P 1 302 4024 FES FES . BB 30 PCF T 1 101 4112 PCF PCF . CB 33 CU a 1 601 535 CU CU . DB 34 HEA a 1 602 538 HEA HEA . EB 34 HEA a 1 603 539 HEA HEA . FB 35 CUA b 1 301 252 CUA CUA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . OA 29 227.914 243.933 215.602 1 197.57 ? FE1 FES 301 E 1 HETATM 2 FE FE2 FES . . . OA 29 226.825 243.471 218.51 1 197.57 ? FE2 FES 301 E 1 HETATM 3 S S1 FES . . . OA 29 228.841 243.882 217.636 1 197.57 ? S1 FES 301 E 1 HETATM 4 S S2 FES . . . OA 29 225.9 243.516 216.476 1 197.57 ? S2 FES 301 E 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 57 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #