data_6GIQ # _model_server_result.job_id hZt6n7CAnpP5mBfKbrj0EA _model_server_result.datetime_utc '2024-11-21 14:02:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6giq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"LA","auth_seq_id":406}' # _entry.id 6GIQ # _exptl.entry_id 6GIQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 592.891 _entity.id 27 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GIQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 32-meric _pdbx_struct_assembly.oligomeric_count 32 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 27 LA N N ? 27 UA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 164 E CYS 164 1_555 E SG CYS 180 E CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 F SG CYS 101 F CYS 101 1_555 F SG CYS 123 F CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 N SG CYS 164 P CYS 164 1_555 N SG CYS 180 P CYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 O SG CYS 101 Q CYS 101 1_555 O SG CYS 123 Q CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 DA SG CYS 27 j CYS 27 1_555 DA SG CYS 59 j CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 DA SG CYS 37 j CYS 37 1_555 DA SG CYS 48 j CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 C NE2 HIS 82 C HIS 82 1_555 HA FE HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc2 C NE2 HIS 96 C HIS 96 1_555 IA FE HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 HA FE HEC . C HEC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 IA FE HEC . C HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc5 D NE2 HIS 105 D HIS 105 1_555 MA FE HEC . D HEC 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc6 L NE2 HIS 82 N HIS 82 1_555 SA FE HEC . N HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc7 L NE2 HIS 96 N HIS 96 1_555 TA FE HEC . N HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc8 L NE2 HIS 183 N HIS 183 1_555 SA FE HEC . N HEC 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc9 L NE2 HIS 197 N HIS 197 1_555 TA FE HEC . N HEC 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc10 M NE2 HIS 105 O HIS 105 1_555 YA FE HEC . O HEC 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc11 U NE2 HIS 62 a HIS 62 1_555 DB FE HEA . a HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc12 U ND1 HIS 241 a HIS 241 1_555 CB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc13 U NE2 HIS 291 a HIS 291 1_555 CB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc14 U NE2 HIS 378 a HIS 378 1_555 DB FE HEA . a HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? # _chem_comp.formula 'C39 H60 O4' _chem_comp.formula_weight 592.891 _chem_comp.id UQ6 _chem_comp.mon_nstd_flag . _chem_comp.name 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1M UQ6 sing 1324 n n C1 C2 UQ6 doub 1325 n y C1 C6 UQ6 sing 1326 n y C1M H1M1 UQ6 sing 1327 n n C1M H1M2 UQ6 sing 1328 n n C1M H1M3 UQ6 sing 1329 n n C2 O2 UQ6 sing 1330 n n C2 C3 UQ6 sing 1331 n y O2 HO2 UQ6 sing 1332 n n C3 C4 UQ6 doub 1333 n y C3 O3 UQ6 sing 1334 n n C4 C5 UQ6 sing 1335 n y C4 O4 UQ6 sing 1336 n n C5 O5 UQ6 sing 1337 n n C5 C6 UQ6 doub 1338 n y O5 HO5 UQ6 sing 1339 n n C6 C7 UQ6 sing 1340 n n O3 C3M UQ6 sing 1341 n n C3M H3M1 UQ6 sing 1342 n n C3M H3M2 UQ6 sing 1343 n n C3M H3M3 UQ6 sing 1344 n n O4 C4M UQ6 sing 1345 n n C4M H4M1 UQ6 sing 1346 n n C4M H4M2 UQ6 sing 1347 n n C4M H4M3 UQ6 sing 1348 n n C7 C8 UQ6 sing 1349 n n C7 H71 UQ6 sing 1350 n n C7 H72 UQ6 sing 1351 n n C8 C9 UQ6 doub 1352 e n C8 H8 UQ6 sing 1353 n n C9 C10 UQ6 sing 1354 n n C9 C11 UQ6 sing 1355 n n C10 H101 UQ6 sing 1356 n n C10 H102 UQ6 sing 1357 n n C10 H103 UQ6 sing 1358 n n C11 C12 UQ6 sing 1359 n n C11 H111 UQ6 sing 1360 n n C11 H112 UQ6 sing 1361 n n C12 C13 UQ6 sing 1362 n n C12 H121 UQ6 sing 1363 n n C12 H122 UQ6 sing 1364 n n C13 C14 UQ6 doub 1365 e n C13 H13 UQ6 sing 1366 n n C14 C15 UQ6 sing 1367 n n C14 C16 UQ6 sing 1368 n n C15 H151 UQ6 sing 1369 n n C15 H152 UQ6 sing 1370 n n C15 H153 UQ6 sing 1371 n n C16 C17 UQ6 sing 1372 n n C16 H161 UQ6 sing 1373 n n C16 H162 UQ6 sing 1374 n n C17 C18 UQ6 sing 1375 n n C17 H171 UQ6 sing 1376 n n C17 H172 UQ6 sing 1377 n n C18 C19 UQ6 doub 1378 z n C18 H18 UQ6 sing 1379 n n C19 C20 UQ6 sing 1380 n n C19 C21 UQ6 sing 1381 n n C20 H201 UQ6 sing 1382 n n C20 H202 UQ6 sing 1383 n n C20 H203 UQ6 sing 1384 n n C21 C22 UQ6 sing 1385 n n C21 H211 UQ6 sing 1386 n n C21 H212 UQ6 sing 1387 n n C22 C23 UQ6 sing 1388 n n C22 H221 UQ6 sing 1389 n n C22 H222 UQ6 sing 1390 n n C23 C24 UQ6 doub 1391 e n C23 H23 UQ6 sing 1392 n n C24 C25 UQ6 sing 1393 n n C24 C26 UQ6 sing 1394 n n C25 H251 UQ6 sing 1395 n n C25 H252 UQ6 sing 1396 n n C25 H253 UQ6 sing 1397 n n C26 C27 UQ6 sing 1398 n n C26 H261 UQ6 sing 1399 n n C26 H262 UQ6 sing 1400 n n C27 C28 UQ6 sing 1401 n n C27 H271 UQ6 sing 1402 n n C27 H272 UQ6 sing 1403 n n C28 C29 UQ6 doub 1404 e n C28 H28 UQ6 sing 1405 n n C29 C30 UQ6 sing 1406 n n C29 C31 UQ6 sing 1407 n n C30 H301 UQ6 sing 1408 n n C30 H302 UQ6 sing 1409 n n C30 H303 UQ6 sing 1410 n n C31 C32 UQ6 sing 1411 n n C31 H311 UQ6 sing 1412 n n C31 H312 UQ6 sing 1413 n n C32 C33 UQ6 sing 1414 n n C32 H321 UQ6 sing 1415 n n C32 H322 UQ6 sing 1416 n n C33 C34 UQ6 doub 1417 n n C33 H33 UQ6 sing 1418 n n C34 C35 UQ6 sing 1419 n n C34 C36 UQ6 sing 1420 n n C35 H351 UQ6 sing 1421 n n C35 H352 UQ6 sing 1422 n n C35 H353 UQ6 sing 1423 n n C36 H361 UQ6 sing 1424 n n C36 H362 UQ6 sing 1425 n n C36 H363 UQ6 sing 1426 n n # _atom_sites.entry_id 6GIQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code GA 23 6PH C 1 401 4013 6PH 6PH . HA 24 HEC C 1 402 4001 HEC HEM . IA 24 HEC C 1 403 4002 HEC HEM . JA 25 8PE C 1 404 4010 8PE 8PE . KA 26 CN5 C 1 405 4033 CN5 CN5 . LA 27 UQ6 C 1 406 4034 UQ6 UQ6 . MA 24 HEC D 1 401 4003 HEC HEM . NA 28 7PH D 1 402 4014 7PH 7PH . OA 29 FES E 1 301 4004 FES FES . PA 30 PCF I 1 101 4012 PCF PCF . QA 31 9PE N 1 401 4011 9PE 9PE . RA 23 6PH N 1 402 4113 6PH 6PH . SA 24 HEC N 1 403 4021 HEC HEM . TA 24 HEC N 1 404 4022 HEC HEM . UA 27 UQ6 N 1 405 4023 UQ6 UQ6 . VA 25 8PE N 1 406 4110 8PE 8PE . WA 31 9PE N 1 407 4111 9PE 9PE . XA 32 CN3 N 1 408 4131 CN3 CN3 . YA 24 HEC O 1 401 4023 HEC HEM . ZA 28 7PH P 1 301 4114 7PH 7PH . AB 29 FES P 1 302 4024 FES FES . BB 30 PCF T 1 101 4112 PCF PCF . CB 33 CU a 1 601 535 CU CU . DB 34 HEA a 1 602 538 HEA HEA . EB 34 HEA a 1 603 539 HEA HEA . FB 35 CUA b 1 301 252 CUA CUA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UQ6 . . . LA 27 187.714 197.91 209.416 1 66.73 ? C1 UQ6 406 C 1 HETATM 2 C C1M UQ6 . . . LA 27 188.546 198.253 210.619 1 66.73 ? C1M UQ6 406 C 1 HETATM 3 C C2 UQ6 . . . LA 27 186.932 196.768 209.458 1 66.73 ? C2 UQ6 406 C 1 HETATM 4 O O2 UQ6 . . . LA 27 186.947 195.999 210.582 1 66.73 ? O2 UQ6 406 C 1 HETATM 5 C C3 UQ6 . . . LA 27 186.13 196.424 208.373 1 66.73 ? C3 UQ6 406 C 1 HETATM 6 C C4 UQ6 . . . LA 27 186.155 197.214 207.233 1 66.73 ? C4 UQ6 406 C 1 HETATM 7 C C5 UQ6 . . . LA 27 186.948 198.358 207.217 1 66.73 ? C5 UQ6 406 C 1 HETATM 8 O O5 UQ6 . . . LA 27 186.969 199.151 206.126 1 66.73 ? O5 UQ6 406 C 1 HETATM 9 C C6 UQ6 . . . LA 27 187.715 198.725 208.299 1 66.73 ? C6 UQ6 406 C 1 HETATM 10 O O3 UQ6 . . . LA 27 185.384 195.28 208.389 1 66.73 ? O3 UQ6 406 C 1 HETATM 11 C C3M UQ6 . . . LA 27 184.124 195.441 209.014 1 66.73 ? C3M UQ6 406 C 1 HETATM 12 O O4 UQ6 . . . LA 27 185.389 196.895 206.148 1 66.73 ? O4 UQ6 406 C 1 HETATM 13 C C4M UQ6 . . . LA 27 186.155 196.067 205.266 1 66.73 ? C4M UQ6 406 C 1 HETATM 14 C C7 UQ6 . . . LA 27 188.576 199.967 208.185 1 66.73 ? C7 UQ6 406 C 1 HETATM 15 C C8 UQ6 . . . LA 27 188.074 201.281 208.745 1 66.73 ? C8 UQ6 406 C 1 HETATM 16 C C9 UQ6 . . . LA 27 188.751 202.395 208.519 1 66.73 ? C9 UQ6 406 C 1 HETATM 17 C C10 UQ6 . . . LA 27 190.018 202.393 207.702 1 66.73 ? C10 UQ6 406 C 1 HETATM 18 C C11 UQ6 . . . LA 27 188.295 203.723 209.074 1 66.73 ? C11 UQ6 406 C 1 HETATM 19 C C12 UQ6 . . . LA 27 189.423 204.286 209.95 1 66.73 ? C12 UQ6 406 C 1 HETATM 20 C C13 UQ6 . . . LA 27 189.386 205.796 210.044 1 66.73 ? C13 UQ6 406 C 1 HETATM 21 C C14 UQ6 . . . LA 27 190.009 206.46 210.999 1 66.73 ? C14 UQ6 406 C 1 HETATM 22 C C15 UQ6 . . . LA 27 190.796 205.75 212.07 1 66.73 ? C15 UQ6 406 C 1 HETATM 23 C C16 UQ6 . . . LA 27 189.934 207.965 211.033 1 66.73 ? C16 UQ6 406 C 1 HETATM 24 C C17 UQ6 . . . LA 27 191.31 208.58 211.317 1 66.73 ? C17 UQ6 406 C 1 HETATM 25 C C18 UQ6 . . . LA 27 191.548 209.684 210.316 1 66.73 ? C18 UQ6 406 C 1 HETATM 26 C C19 UQ6 . . . LA 27 192.595 210.48 210.318 1 66.73 ? C19 UQ6 406 C 1 HETATM 27 C C20 UQ6 . . . LA 27 192.687 211.531 209.244 1 66.73 ? C20 UQ6 406 C 1 HETATM 28 C C21 UQ6 . . . LA 27 193.696 210.366 211.344 1 66.73 ? C21 UQ6 406 C 1 HETATM 29 C C22 UQ6 . . . LA 27 194.208 211.753 211.755 1 66.73 ? C22 UQ6 406 C 1 HETATM 30 C C23 UQ6 . . . LA 27 195.606 212.014 211.231 1 66.73 ? C23 UQ6 406 C 1 HETATM 31 C C24 UQ6 . . . LA 27 196.024 213.224 210.922 1 66.73 ? C24 UQ6 406 C 1 HETATM 32 C C25 UQ6 . . . LA 27 195.124 214.419 211.088 1 66.73 ? C25 UQ6 406 C 1 HETATM 33 C C26 UQ6 . . . LA 27 197.427 213.43 210.403 1 66.73 ? C26 UQ6 406 C 1 HETATM 34 C C27 UQ6 . . . LA 27 197.442 214.483 209.293 1 66.73 ? C27 UQ6 406 C 1 HETATM 35 C C28 UQ6 . . . LA 27 198.574 215.45 209.534 1 66.73 ? C28 UQ6 406 C 1 HETATM 36 C C29 UQ6 . . . LA 27 199.172 216.117 208.572 1 66.73 ? C29 UQ6 406 C 1 HETATM 37 C C30 UQ6 . . . LA 27 198.742 215.944 207.135 1 66.73 ? C30 UQ6 406 C 1 HETATM 38 C C31 UQ6 . . . LA 27 200.295 217.057 208.947 1 66.73 ? C31 UQ6 406 C 1 HETATM 39 C C32 UQ6 . . . LA 27 200.872 217.818 207.751 1 66.73 ? C32 UQ6 406 C 1 HETATM 40 C C33 UQ6 . . . LA 27 201.924 218.794 208.221 1 66.73 ? C33 UQ6 406 C 1 HETATM 41 C C34 UQ6 . . . LA 27 203.189 218.684 207.886 1 66.73 ? C34 UQ6 406 C 1 HETATM 42 C C35 UQ6 . . . LA 27 203.682 217.563 207.008 1 66.73 ? C35 UQ6 406 C 1 HETATM 43 C C36 UQ6 . . . LA 27 204.184 219.694 208.387 1 66.73 ? C36 UQ6 406 C 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 66 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #